ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A872:A871

Extra

PDB:
ATOM 1 O3' C A 871 172.062 75.783 -47.693 1.00 29.46 O
ATOM 2 P A A 872 172.020 76.237 -46.154 1.00 31.05 P
ATOM 3 OP1 A A 872 172.079 75.021 -45.271 1.00 30.22 O
ATOM 4 OP2 A A 872 170.881 77.183 -46.041 1.00 29.94 O
ATOM 5 O5' A A 872 173.399 76.990 -45.940 1.00 29.63 O
ATOM 6 C5' A A 872 174.646 76.259 -45.922 1.00 26.71 C
ATOM 7 C4' A A 872 175.812 77.215 -45.979 1.00 23.91 C
ATOM 8 O4' A A 872 175.683 78.016 -47.178 1.00 23.48 O
ATOM 9 C3' A A 872 175.868 78.212 -44.839 1.00 22.77 C
ATOM 10 O3' A A 872 176.634 77.686 -43.782 1.00 21.82 O
ATOM 11 C2' A A 872 176.559 79.410 -45.465 1.00 23.03 C
ATOM 12 O2' A A 872 177.945 79.221 -45.478 1.00 24.71 O
ATOM 13 C1' A A 872 176.074 79.344 -46.912 1.00 23.55 C
ATOM 14 N9 A A 872 174.953 80.227 -47.247 1.00 23.85 N
ATOM 15 C8 A A 872 173.613 79.922 -47.287 1.00 23.14 C
ATOM 16 N7 A A 872 172.860 80.906 -47.712 1.00 22.61 N
ATOM 17 C5 A A 872 173.757 81.935 -47.951 1.00 22.03 C
ATOM 18 C6 A A 872 173.589 83.234 -48.442 1.00 21.85 C
ATOM 19 N6 A A 872 172.413 83.730 -48.829 1.00 21.54 N
ATOM 20 N1 A A 872 174.689 84.017 -48.540 1.00 22.72 N
ATOM 21 C2 A A 872 175.874 83.505 -48.186 1.00 20.91 C
ATOM 22 N3 A A 872 176.162 82.292 -47.732 1.00 22.71 N
ATOM 23 C4 A A 872 175.047 81.543 -47.638 1.00 23.32 C
ATOM 24 P A A 873 176.444 78.266 -42.295 1.00 22.25 P
ATOM 25 OP1 A A 873 177.345 77.518 -41.367 1.00 23.39 O
ATOM 26 OP2 A A 873 174.984 78.314 -42.019 1.00 21.06 O
ATOM 27 O5' A A 873 176.994 79.744 -42.385 1.00 21.92 O
TER

ATOM 1 O3' G B 870 168.368 80.082 -49.759 1.00 26.62 O
ATOM 2 P C B 871 168.357 78.634 -50.469 1.00 29.64 P
ATOM 3 OP1 C B 871 167.096 77.924 -50.098 1.00 29.63 O
ATOM 4 OP2 C B 871 168.675 78.862 -51.909 1.00 32.25 O
ATOM 5 O5' C B 871 169.547 77.880 -49.755 1.00 27.69 O
ATOM 6 C5' C B 871 169.761 76.480 -49.910 1.00 27.14 C
ATOM 7 C4' C B 871 171.241 76.204 -49.919 1.00 27.95 C
ATOM 8 O4' C B 871 171.800 76.889 -51.062 1.00 28.71 O
ATOM 9 C3' C B 871 171.997 76.752 -48.717 1.00 28.69 C
ATOM 10 O3' C B 871 172.062 75.783 -47.693 1.00 29.46 O
ATOM 11 C2' C B 871 173.380 77.047 -49.282 1.00 30.14 C
ATOM 12 O2' C B 871 174.231 75.924 -49.302 1.00 32.36 O
ATOM 13 C1' C B 871 173.061 77.428 -50.729 1.00 30.08 C
ATOM 14 N1 C B 871 173.042 78.878 -50.984 1.00 30.51 N
ATOM 15 C2 C B 871 174.218 79.495 -51.402 1.00 33.22 C
ATOM 16 O2 C B 871 175.245 78.806 -51.526 1.00 37.27 O
ATOM 17 N3 C B 871 174.216 80.823 -51.664 1.00 33.71 N
ATOM 18 C4 C B 871 173.092 81.526 -51.528 1.00 33.84 C
ATOM 19 N4 C B 871 173.123 82.831 -51.843 1.00 33.64 N
ATOM 20 C5 C B 871 171.883 80.925 -51.079 1.00 33.31 C
ATOM 21 C6 C B 871 171.902 79.611 -50.823 1.00 30.88 C
ATOM 22 P A B 872 172.020 76.237 -46.154 1.00 31.05 P
ATOM 23 OP1 A B 872 172.079 75.021 -45.271 1.00 30.22 O
ATOM 24 OP2 A B 872 170.881 77.183 -46.041 1.00 29.94 O
ATOM 25 O5' A B 872 173.399 76.990 -45.940 1.00 29.63 O
TER

Atoms:
OP1: (172.079,75.021,-45.271)
OP2: (170.881,77.183,-46.041)
C3': (175.868,78.212,-44.839)
C1': (176.074,79.344,-46.912)
C5': (174.646,76.259,-45.922)
O4': (175.683,78.016,-47.178)
C8: (173.613,79.922,-47.287)
O2': (177.945,79.221,-45.478)
C6: (173.589,83.234,-48.442)
C5: (173.757,81.935,-47.951)
C4: (175.047,81.543,-47.638)
P: (172.020,76.237,-46.154)
C4': (175.812,77.215,-45.979)
C2': (176.559,79.410,-45.465)
C2: (175.874,83.505,-48.186)
N1: (174.689,84.017,-48.540)
N3: (176.162,82.292,-47.732)
N6: (172.413,83.730,-48.829)
N7: (172.860,80.906,-47.712)
N9: (174.953,80.227,-47.247)
O5': (173.399,76.990,-45.940)
O3': (176.634,77.686,-43.782)
C2: (174.218,79.495,-51.402)
OP1: (167.096,77.924,-50.098)
OP2: (168.675,78.862,-51.909)
C4: (173.092,81.526,-51.528)
O5': (169.547,77.880,-49.755)
C3': (171.997,76.752,-48.717)
C1': (173.061,77.428,-50.729)
O4': (171.800,76.889,-51.062)
C5': (169.761,76.480,-49.910)
P: (168.357,78.634,-50.469)
O2: (175.245,78.806,-51.526)
C4': (171.241,76.204,-49.919)
C2': (173.380,77.047,-49.282)
O2': (174.231,75.924,-49.302)
N1: (173.042,78.878,-50.984)
N3: (174.216,80.823,-51.664)
N4: (173.123,82.831,-51.843)
C6: (171.902,79.611,-50.823)
C5: (171.883,80.925,-51.079)
O3': (172.062,75.783,-47.693)
Image (generated by PyMOL):
PyMOL image
show in jmol