Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3AKZ:H8:H44
Extra
PDB:
ATOM 1 O3' U A 7 -6.835 44.501 80.475 1.00 45.62 O
ATOM 2 P C A 8 -6.180 43.288 79.649 1.00 45.02 P
ATOM 3 OP1 C A 8 -5.101 42.701 80.486 1.00 44.72 O
ATOM 4 OP2 C A 8 -5.863 43.783 78.284 1.00 44.37 O
ATOM 5 O5' C A 8 -7.357 42.220 79.530 1.00 43.72 O
ATOM 6 C5' C A 8 -7.065 40.829 79.455 1.00 41.03 C
ATOM 7 C4' C A 8 -7.025 40.240 80.843 1.00 38.73 C
ATOM 8 O4' C A 8 -8.354 40.320 81.422 1.00 37.54 O
ATOM 9 C3' C A 8 -6.592 38.781 80.942 1.00 38.07 C
ATOM 10 O3' C A 8 -5.848 38.620 82.142 1.00 36.17 O
ATOM 11 C2' C A 8 -7.917 38.034 81.057 1.00 37.25 C
ATOM 12 O2' C A 8 -7.807 36.804 81.745 1.00 33.37 O
ATOM 13 C1' C A 8 -8.776 39.037 81.829 1.00 37.03 C
ATOM 14 N1 C A 8 -10.214 38.911 81.547 1.00 36.64 N
ATOM 15 C2 C A 8 -11.070 38.513 82.579 1.00 36.42 C
ATOM 16 O2 C A 8 -10.593 38.301 83.704 1.00 35.96 O
ATOM 17 N3 C A 8 -12.391 38.375 82.328 1.00 37.34 N
ATOM 18 C4 C A 8 -12.867 38.624 81.106 1.00 39.64 C
ATOM 19 N4 C A 8 -14.178 38.473 80.903 1.00 42.04 N
ATOM 20 C5 C A 8 -12.019 39.037 80.037 1.00 38.50 C
ATOM 21 C6 C A 8 -10.712 39.168 80.299 1.00 37.08 C
ATOM 22 P G A 9 -4.245 38.707 82.096 1.00 35.43 P
ATOM 23 OP1 G A 9 -3.729 38.090 83.345 1.00 34.46 O
ATOM 24 OP2 G A 9 -3.873 40.107 81.760 1.00 33.50 O
ATOM 25 O5' G A 9 -3.844 37.769 80.873 1.00 33.42 O
TER
ATOM 1 O3' G B 43 -7.252 37.523 86.959 1.00 43.98 O
ATOM 2 P G B 44 -7.591 38.992 87.514 1.00 44.84 P
ATOM 3 OP1 G B 44 -6.430 39.449 88.320 1.00 44.47 O
ATOM 4 OP2 G B 44 -8.942 38.953 88.128 1.00 44.89 O
ATOM 5 O5' G B 44 -7.663 39.893 86.203 1.00 43.19 O
ATOM 6 C5' G B 44 -6.476 40.274 85.515 1.00 42.35 C
ATOM 7 C4' G B 44 -6.745 41.476 84.643 1.00 42.37 C
ATOM 8 O4' G B 44 -7.747 41.123 83.656 1.00 41.23 O
ATOM 9 C3' G B 44 -7.327 42.684 85.359 1.00 41.35 C
ATOM 10 O3' G B 44 -6.290 43.485 85.917 1.00 41.32 O
ATOM 11 C2' G B 44 -8.054 43.409 84.233 1.00 40.92 C
ATOM 12 O2' G B 44 -7.181 44.186 83.438 1.00 39.66 O
ATOM 13 C1' G B 44 -8.590 42.235 83.410 1.00 41.08 C
ATOM 14 N9 G B 44 -9.958 41.842 83.736 1.00 41.19 N
ATOM 15 C8 G B 44 -10.393 41.236 84.891 1.00 42.89 C
ATOM 16 N7 G B 44 -11.676 40.997 84.893 1.00 43.98 N
ATOM 17 C5 G B 44 -12.118 41.475 83.667 1.00 41.78 C
ATOM 18 C6 G B 44 -13.420 41.488 83.098 1.00 40.77 C
ATOM 19 O6 G B 44 -14.477 41.067 83.583 1.00 39.22 O
ATOM 20 N1 G B 44 -13.418 42.065 81.833 1.00 39.41 N
ATOM 21 C2 G B 44 -12.311 42.564 81.194 1.00 39.23 C
ATOM 22 N2 G B 44 -12.515 43.084 79.977 1.00 37.58 N
ATOM 23 N3 G B 44 -11.092 42.557 81.711 1.00 39.43 N
ATOM 24 C4 G B 44 -11.069 42.001 82.941 1.00 40.92 C
ATOM 25 P U B 45 -6.623 44.491 87.124 1.00 40.89 P
ATOM 26 OP1 U B 45 -5.357 45.142 87.549 1.00 41.00 O
ATOM 27 OP2 U B 45 -7.426 43.734 88.116 1.00 39.16 O
ATOM 28 O5' U B 45 -7.564 45.590 86.454 1.00 45.16 O
TER
ATOM 2 P C A 8 -6.180 43.288 79.649 1.00 45.02 P
ATOM 3 OP1 C A 8 -5.101 42.701 80.486 1.00 44.72 O
ATOM 4 OP2 C A 8 -5.863 43.783 78.284 1.00 44.37 O
ATOM 5 O5' C A 8 -7.357 42.220 79.530 1.00 43.72 O
ATOM 6 C5' C A 8 -7.065 40.829 79.455 1.00 41.03 C
ATOM 7 C4' C A 8 -7.025 40.240 80.843 1.00 38.73 C
ATOM 8 O4' C A 8 -8.354 40.320 81.422 1.00 37.54 O
ATOM 9 C3' C A 8 -6.592 38.781 80.942 1.00 38.07 C
ATOM 10 O3' C A 8 -5.848 38.620 82.142 1.00 36.17 O
ATOM 11 C2' C A 8 -7.917 38.034 81.057 1.00 37.25 C
ATOM 12 O2' C A 8 -7.807 36.804 81.745 1.00 33.37 O
ATOM 13 C1' C A 8 -8.776 39.037 81.829 1.00 37.03 C
ATOM 14 N1 C A 8 -10.214 38.911 81.547 1.00 36.64 N
ATOM 15 C2 C A 8 -11.070 38.513 82.579 1.00 36.42 C
ATOM 16 O2 C A 8 -10.593 38.301 83.704 1.00 35.96 O
ATOM 17 N3 C A 8 -12.391 38.375 82.328 1.00 37.34 N
ATOM 18 C4 C A 8 -12.867 38.624 81.106 1.00 39.64 C
ATOM 19 N4 C A 8 -14.178 38.473 80.903 1.00 42.04 N
ATOM 20 C5 C A 8 -12.019 39.037 80.037 1.00 38.50 C
ATOM 21 C6 C A 8 -10.712 39.168 80.299 1.00 37.08 C
ATOM 22 P G A 9 -4.245 38.707 82.096 1.00 35.43 P
ATOM 23 OP1 G A 9 -3.729 38.090 83.345 1.00 34.46 O
ATOM 24 OP2 G A 9 -3.873 40.107 81.760 1.00 33.50 O
ATOM 25 O5' G A 9 -3.844 37.769 80.873 1.00 33.42 O
TER
ATOM 1 O3' G B 43 -7.252 37.523 86.959 1.00 43.98 O
ATOM 2 P G B 44 -7.591 38.992 87.514 1.00 44.84 P
ATOM 3 OP1 G B 44 -6.430 39.449 88.320 1.00 44.47 O
ATOM 4 OP2 G B 44 -8.942 38.953 88.128 1.00 44.89 O
ATOM 5 O5' G B 44 -7.663 39.893 86.203 1.00 43.19 O
ATOM 6 C5' G B 44 -6.476 40.274 85.515 1.00 42.35 C
ATOM 7 C4' G B 44 -6.745 41.476 84.643 1.00 42.37 C
ATOM 8 O4' G B 44 -7.747 41.123 83.656 1.00 41.23 O
ATOM 9 C3' G B 44 -7.327 42.684 85.359 1.00 41.35 C
ATOM 10 O3' G B 44 -6.290 43.485 85.917 1.00 41.32 O
ATOM 11 C2' G B 44 -8.054 43.409 84.233 1.00 40.92 C
ATOM 12 O2' G B 44 -7.181 44.186 83.438 1.00 39.66 O
ATOM 13 C1' G B 44 -8.590 42.235 83.410 1.00 41.08 C
ATOM 14 N9 G B 44 -9.958 41.842 83.736 1.00 41.19 N
ATOM 15 C8 G B 44 -10.393 41.236 84.891 1.00 42.89 C
ATOM 16 N7 G B 44 -11.676 40.997 84.893 1.00 43.98 N
ATOM 17 C5 G B 44 -12.118 41.475 83.667 1.00 41.78 C
ATOM 18 C6 G B 44 -13.420 41.488 83.098 1.00 40.77 C
ATOM 19 O6 G B 44 -14.477 41.067 83.583 1.00 39.22 O
ATOM 20 N1 G B 44 -13.418 42.065 81.833 1.00 39.41 N
ATOM 21 C2 G B 44 -12.311 42.564 81.194 1.00 39.23 C
ATOM 22 N2 G B 44 -12.515 43.084 79.977 1.00 37.58 N
ATOM 23 N3 G B 44 -11.092 42.557 81.711 1.00 39.43 N
ATOM 24 C4 G B 44 -11.069 42.001 82.941 1.00 40.92 C
ATOM 25 P U B 45 -6.623 44.491 87.124 1.00 40.89 P
ATOM 26 OP1 U B 45 -5.357 45.142 87.549 1.00 41.00 O
ATOM 27 OP2 U B 45 -7.426 43.734 88.116 1.00 39.16 O
ATOM 28 O5' U B 45 -7.564 45.590 86.454 1.00 45.16 O
TER
Atoms:
C2: (-11.070,38.513,82.579)
OP1: (-5.101,42.701,80.486)
OP2: (-5.863,43.783,78.284)
C4: (-12.867,38.624,81.106)
O5': (-7.357,42.220,79.530)
C3': (-6.592,38.781,80.942)
C1': (-8.776,39.037,81.829)
O4': (-8.354,40.320,81.422)
C5': (-7.065,40.829,79.455)
P: (-6.180,43.288,79.649)
O2: (-10.593,38.301,83.704)
C4': (-7.025,40.240,80.843)
C2': (-7.917,38.034,81.057)
O2': (-7.807,36.804,81.745)
N1: (-10.214,38.911,81.547)
N3: (-12.391,38.375,82.328)
N4: (-14.178,38.473,80.903)
C6: (-10.712,39.168,80.299)
C5: (-12.019,39.037,80.037)
O3': (-5.848,38.620,82.142)
OP1: (-5.101,42.701,80.486)
OP2: (-5.863,43.783,78.284)
C4: (-12.867,38.624,81.106)
O5': (-7.357,42.220,79.530)
C3': (-6.592,38.781,80.942)
C1': (-8.776,39.037,81.829)
O4': (-8.354,40.320,81.422)
C5': (-7.065,40.829,79.455)
P: (-6.180,43.288,79.649)
O2: (-10.593,38.301,83.704)
C4': (-7.025,40.240,80.843)
C2': (-7.917,38.034,81.057)
O2': (-7.807,36.804,81.745)
N1: (-10.214,38.911,81.547)
N3: (-12.391,38.375,82.328)
N4: (-14.178,38.473,80.903)
C6: (-10.712,39.168,80.299)
C5: (-12.019,39.037,80.037)
O3': (-5.848,38.620,82.142)
OP1: (-6.430,39.449,88.320)
OP2: (-8.942,38.953,88.128)
C3': (-7.327,42.684,85.359)
C1': (-8.590,42.235,83.410)
C5': (-6.476,40.274,85.515)
O6: (-14.477,41.067,83.583)
O4': (-7.747,41.123,83.656)
C8: (-10.393,41.236,84.891)
C2: (-12.311,42.564,81.194)
C6: (-13.420,41.488,83.098)
C5: (-12.118,41.475,83.667)
C4: (-11.069,42.001,82.941)
P: (-7.591,38.992,87.514)
C4': (-6.745,41.476,84.643)
C2': (-8.054,43.409,84.233)
O2': (-7.181,44.186,83.438)
N1: (-13.418,42.065,81.833)
N2: (-12.515,43.084,79.977)
N3: (-11.092,42.557,81.711)
N7: (-11.676,40.997,84.893)
N9: (-9.958,41.842,83.736)
O5': (-7.663,39.893,86.203)
O3': (-6.290,43.485,85.917)
OP2: (-8.942,38.953,88.128)
C3': (-7.327,42.684,85.359)
C1': (-8.590,42.235,83.410)
C5': (-6.476,40.274,85.515)
O6: (-14.477,41.067,83.583)
O4': (-7.747,41.123,83.656)
C8: (-10.393,41.236,84.891)
C2: (-12.311,42.564,81.194)
C6: (-13.420,41.488,83.098)
C5: (-12.118,41.475,83.667)
C4: (-11.069,42.001,82.941)
P: (-7.591,38.992,87.514)
C4': (-6.745,41.476,84.643)
C2': (-8.054,43.409,84.233)
O2': (-7.181,44.186,83.438)
N1: (-13.418,42.065,81.833)
N2: (-12.515,43.084,79.977)
N3: (-11.092,42.557,81.711)
N7: (-11.676,40.997,84.893)
N9: (-9.958,41.842,83.736)
O5': (-7.663,39.893,86.203)
O3': (-6.290,43.485,85.917)
Image (generated by PyMOL):