Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5F:6486:6494
Extra
PDB:
ATOM 1 O3' C A 485 289.139 21.930 287.332 1.00250.35 O
ATOM 2 P C A 486 289.071 20.511 288.095 1.00333.63 P
ATOM 3 OP1 C A 486 289.876 19.549 287.299 1.00334.03 O
ATOM 4 OP2 C A 486 287.637 20.211 288.335 1.00333.42 O
ATOM 5 O5' C A 486 289.804 20.813 289.479 1.00333.57 O
ATOM 6 C5' C A 486 291.131 20.358 289.724 1.00333.87 C
ATOM 7 C4' C A 486 291.991 21.456 290.301 1.00333.75 C
ATOM 8 O4' C A 486 291.148 22.455 290.934 1.00333.36 O
ATOM 9 C3' C A 486 292.970 21.042 291.394 1.00333.90 C
ATOM 10 O3' C A 486 294.174 20.483 290.883 1.00334.27 O
ATOM 11 C2' C A 486 293.178 22.344 292.165 1.00333.62 C
ATOM 12 O2' C A 486 294.101 23.189 291.490 1.00333.68 O
ATOM 13 C1' C A 486 291.789 22.982 292.074 1.00333.26 C
ATOM 14 N1 C A 486 290.953 22.691 293.265 1.00333.06 N
ATOM 15 C2 C A 486 291.144 23.447 294.427 1.00332.84 C
ATOM 16 O2 C A 486 292.012 24.332 294.436 1.00332.82 O
ATOM 17 N3 C A 486 290.377 23.185 295.514 1.00332.66 N
ATOM 18 C4 C A 486 289.449 22.223 295.472 1.00332.68 C
ATOM 19 N4 C A 486 288.718 22.003 296.568 1.00332.50 N
ATOM 20 C5 C A 486 289.228 21.443 294.301 1.00332.90 C
ATOM 21 C6 C A 486 289.993 21.712 293.235 1.00333.08 C
ATOM 22 P C A 487 294.876 19.235 291.624 1.00306.01 P
ATOM 23 OP1 C A 487 296.130 18.937 290.887 1.00306.35 O
ATOM 24 OP2 C A 487 293.854 18.167 291.741 1.00306.02 O
ATOM 25 O5' C A 487 295.223 19.822 293.073 1.00305.82 O
TER
ATOM 1 O3' G B 493 288.353 24.168 302.346 1.00258.82 O
ATOM 2 P G B 494 287.371 25.431 302.160 1.00287.62 P
ATOM 3 OP1 G B 494 287.380 26.184 303.440 1.00287.36 O
ATOM 4 OP2 G B 494 286.079 24.913 301.646 1.00287.54 O
ATOM 5 O5' G B 494 288.106 26.280 301.026 1.00287.68 O
ATOM 6 C5' G B 494 289.495 26.579 301.122 1.00287.85 C
ATOM 7 C4' G B 494 290.035 27.166 299.837 1.00287.95 C
ATOM 8 O4' G B 494 290.061 26.152 298.798 1.00288.25 O
ATOM 9 C3' G B 494 289.233 28.308 299.234 1.00287.65 C
ATOM 10 O3' G B 494 289.518 29.560 299.841 1.00287.41 O
ATOM 11 C2' G B 494 289.607 28.241 297.753 1.00287.87 C
ATOM 12 O2' G B 494 290.857 28.873 297.520 1.00287.98 O
ATOM 13 C1' G B 494 289.779 26.734 297.542 1.00288.20 C
ATOM 14 N9 G B 494 288.562 26.097 296.999 1.00288.17 N
ATOM 15 C8 G B 494 287.495 25.667 297.753 1.00287.99 C
ATOM 16 N7 G B 494 286.544 25.124 297.050 1.00288.00 N
ATOM 17 C5 G B 494 287.015 25.191 295.748 1.00288.19 C
ATOM 18 C6 G B 494 286.398 24.748 294.557 1.00288.28 C
ATOM 19 O6 G B 494 285.298 24.202 294.458 1.00288.20 O
ATOM 20 N1 G B 494 287.190 24.992 293.439 1.00288.47 N
ATOM 21 C2 G B 494 288.428 25.592 293.473 1.00288.57 C
ATOM 22 N2 G B 494 289.041 25.743 292.289 1.00288.75 N
ATOM 23 N3 G B 494 289.018 26.012 294.586 1.00288.48 N
ATOM 24 C4 G B 494 288.260 25.784 295.686 1.00288.29 C
ATOM 25 P U B 495 288.407 30.301 300.743 1.00226.34 P
ATOM 26 OP1 U B 495 289.105 31.355 301.520 1.00226.18 O
ATOM 27 OP2 U B 495 287.667 29.246 301.482 1.00226.34 O
ATOM 28 O5' U B 495 287.457 30.971 299.648 1.00226.15 O
TER
ATOM 2 P C A 486 289.071 20.511 288.095 1.00333.63 P
ATOM 3 OP1 C A 486 289.876 19.549 287.299 1.00334.03 O
ATOM 4 OP2 C A 486 287.637 20.211 288.335 1.00333.42 O
ATOM 5 O5' C A 486 289.804 20.813 289.479 1.00333.57 O
ATOM 6 C5' C A 486 291.131 20.358 289.724 1.00333.87 C
ATOM 7 C4' C A 486 291.991 21.456 290.301 1.00333.75 C
ATOM 8 O4' C A 486 291.148 22.455 290.934 1.00333.36 O
ATOM 9 C3' C A 486 292.970 21.042 291.394 1.00333.90 C
ATOM 10 O3' C A 486 294.174 20.483 290.883 1.00334.27 O
ATOM 11 C2' C A 486 293.178 22.344 292.165 1.00333.62 C
ATOM 12 O2' C A 486 294.101 23.189 291.490 1.00333.68 O
ATOM 13 C1' C A 486 291.789 22.982 292.074 1.00333.26 C
ATOM 14 N1 C A 486 290.953 22.691 293.265 1.00333.06 N
ATOM 15 C2 C A 486 291.144 23.447 294.427 1.00332.84 C
ATOM 16 O2 C A 486 292.012 24.332 294.436 1.00332.82 O
ATOM 17 N3 C A 486 290.377 23.185 295.514 1.00332.66 N
ATOM 18 C4 C A 486 289.449 22.223 295.472 1.00332.68 C
ATOM 19 N4 C A 486 288.718 22.003 296.568 1.00332.50 N
ATOM 20 C5 C A 486 289.228 21.443 294.301 1.00332.90 C
ATOM 21 C6 C A 486 289.993 21.712 293.235 1.00333.08 C
ATOM 22 P C A 487 294.876 19.235 291.624 1.00306.01 P
ATOM 23 OP1 C A 487 296.130 18.937 290.887 1.00306.35 O
ATOM 24 OP2 C A 487 293.854 18.167 291.741 1.00306.02 O
ATOM 25 O5' C A 487 295.223 19.822 293.073 1.00305.82 O
TER
ATOM 1 O3' G B 493 288.353 24.168 302.346 1.00258.82 O
ATOM 2 P G B 494 287.371 25.431 302.160 1.00287.62 P
ATOM 3 OP1 G B 494 287.380 26.184 303.440 1.00287.36 O
ATOM 4 OP2 G B 494 286.079 24.913 301.646 1.00287.54 O
ATOM 5 O5' G B 494 288.106 26.280 301.026 1.00287.68 O
ATOM 6 C5' G B 494 289.495 26.579 301.122 1.00287.85 C
ATOM 7 C4' G B 494 290.035 27.166 299.837 1.00287.95 C
ATOM 8 O4' G B 494 290.061 26.152 298.798 1.00288.25 O
ATOM 9 C3' G B 494 289.233 28.308 299.234 1.00287.65 C
ATOM 10 O3' G B 494 289.518 29.560 299.841 1.00287.41 O
ATOM 11 C2' G B 494 289.607 28.241 297.753 1.00287.87 C
ATOM 12 O2' G B 494 290.857 28.873 297.520 1.00287.98 O
ATOM 13 C1' G B 494 289.779 26.734 297.542 1.00288.20 C
ATOM 14 N9 G B 494 288.562 26.097 296.999 1.00288.17 N
ATOM 15 C8 G B 494 287.495 25.667 297.753 1.00287.99 C
ATOM 16 N7 G B 494 286.544 25.124 297.050 1.00288.00 N
ATOM 17 C5 G B 494 287.015 25.191 295.748 1.00288.19 C
ATOM 18 C6 G B 494 286.398 24.748 294.557 1.00288.28 C
ATOM 19 O6 G B 494 285.298 24.202 294.458 1.00288.20 O
ATOM 20 N1 G B 494 287.190 24.992 293.439 1.00288.47 N
ATOM 21 C2 G B 494 288.428 25.592 293.473 1.00288.57 C
ATOM 22 N2 G B 494 289.041 25.743 292.289 1.00288.75 N
ATOM 23 N3 G B 494 289.018 26.012 294.586 1.00288.48 N
ATOM 24 C4 G B 494 288.260 25.784 295.686 1.00288.29 C
ATOM 25 P U B 495 288.407 30.301 300.743 1.00226.34 P
ATOM 26 OP1 U B 495 289.105 31.355 301.520 1.00226.18 O
ATOM 27 OP2 U B 495 287.667 29.246 301.482 1.00226.34 O
ATOM 28 O5' U B 495 287.457 30.971 299.648 1.00226.15 O
TER
Atoms:
C2: (291.144,23.447,294.427)
OP1: (289.876,19.549,287.299)
OP2: (287.637,20.211,288.335)
C4: (289.449,22.223,295.472)
O5': (289.804,20.813,289.479)
C3': (292.970,21.042,291.394)
C1': (291.789,22.982,292.074)
O4': (291.148,22.455,290.934)
C5': (291.131,20.358,289.724)
P: (289.071,20.511,288.095)
O2: (292.012,24.332,294.436)
C4': (291.991,21.456,290.301)
C2': (293.178,22.344,292.165)
O2': (294.101,23.189,291.490)
N1: (290.953,22.691,293.265)
N3: (290.377,23.185,295.514)
N4: (288.718,22.003,296.568)
C6: (289.993,21.712,293.235)
C5: (289.228,21.443,294.301)
O3': (294.174,20.483,290.883)
OP1: (289.876,19.549,287.299)
OP2: (287.637,20.211,288.335)
C4: (289.449,22.223,295.472)
O5': (289.804,20.813,289.479)
C3': (292.970,21.042,291.394)
C1': (291.789,22.982,292.074)
O4': (291.148,22.455,290.934)
C5': (291.131,20.358,289.724)
P: (289.071,20.511,288.095)
O2: (292.012,24.332,294.436)
C4': (291.991,21.456,290.301)
C2': (293.178,22.344,292.165)
O2': (294.101,23.189,291.490)
N1: (290.953,22.691,293.265)
N3: (290.377,23.185,295.514)
N4: (288.718,22.003,296.568)
C6: (289.993,21.712,293.235)
C5: (289.228,21.443,294.301)
O3': (294.174,20.483,290.883)
OP1: (287.380,26.184,303.440)
OP2: (286.079,24.913,301.646)
C3': (289.233,28.308,299.234)
C1': (289.779,26.734,297.542)
C5': (289.495,26.579,301.122)
O6: (285.298,24.202,294.458)
O4': (290.061,26.152,298.798)
C8: (287.495,25.667,297.753)
C2: (288.428,25.592,293.473)
C6: (286.398,24.748,294.557)
C5: (287.015,25.191,295.748)
C4: (288.260,25.784,295.686)
P: (287.371,25.431,302.160)
C4': (290.035,27.166,299.837)
C2': (289.607,28.241,297.753)
O2': (290.857,28.873,297.520)
N1: (287.190,24.992,293.439)
N2: (289.041,25.743,292.289)
N3: (289.018,26.012,294.586)
N7: (286.544,25.124,297.050)
N9: (288.562,26.097,296.999)
O5': (288.106,26.280,301.026)
O3': (289.518,29.560,299.841)
OP2: (286.079,24.913,301.646)
C3': (289.233,28.308,299.234)
C1': (289.779,26.734,297.542)
C5': (289.495,26.579,301.122)
O6: (285.298,24.202,294.458)
O4': (290.061,26.152,298.798)
C8: (287.495,25.667,297.753)
C2: (288.428,25.592,293.473)
C6: (286.398,24.748,294.557)
C5: (287.015,25.191,295.748)
C4: (288.260,25.784,295.686)
P: (287.371,25.431,302.160)
C4': (290.035,27.166,299.837)
C2': (289.607,28.241,297.753)
O2': (290.857,28.873,297.520)
N1: (287.190,24.992,293.439)
N2: (289.041,25.743,292.289)
N3: (289.018,26.012,294.586)
N7: (286.544,25.124,297.050)
N9: (288.562,26.097,296.999)
O5': (288.106,26.280,301.026)
O3': (289.518,29.560,299.841)
Image (generated by PyMOL):