ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5B:21454:21456

Extra

PDB:
ATOM 1 O3' A A1453 -61.881 -80.225 73.223 1.00103.10 O
ATOM 2 P C A1454 -62.110 -81.095 74.560 1.00111.53 P
ATOM 3 OP1 C A1454 -63.074 -80.357 75.399 1.00111.60 O
ATOM 4 OP2 C A1454 -60.782 -81.411 75.127 1.00111.70 O
ATOM 5 O5' C A1454 -62.771 -82.421 73.997 1.00112.12 O
ATOM 6 C5' C A1454 -64.179 -82.542 73.855 1.00112.37 C
ATOM 7 C4' C A1454 -64.642 -83.943 74.160 1.00113.30 C
ATOM 8 O4' C A1454 -64.157 -84.847 73.134 1.00113.33 O
ATOM 9 C3' C A1454 -64.151 -84.513 75.489 1.00114.02 C
ATOM 10 O3' C A1454 -65.149 -85.356 76.020 1.00114.85 O
ATOM 11 C2' C A1454 -62.967 -85.366 75.082 1.00114.14 C
ATOM 12 O2' C A1454 -62.663 -86.411 75.984 1.00115.02 O
ATOM 13 C1' C A1454 -63.440 -85.902 73.742 1.00114.01 C
ATOM 14 N1 C A1454 -62.355 -86.294 72.852 1.00113.73 N
ATOM 15 C2 C A1454 -62.424 -87.595 72.400 1.00114.29 C
ATOM 16 O2 C A1454 -63.378 -88.255 72.778 1.00114.94 O
ATOM 17 N3 C A1454 -61.492 -88.086 71.575 1.00114.14 N
ATOM 18 C4 C A1454 -60.494 -87.281 71.221 1.00113.44 C
ATOM 19 N4 C A1454 -59.590 -87.820 70.400 1.00113.34 N
ATOM 20 C5 C A1454 -60.374 -85.919 71.676 1.00112.83 C
ATOM 21 C6 C A1454 -61.330 -85.460 72.496 1.00113.00 C
ATOM 22 P U A1455 -66.266 -84.743 76.966 1.00 98.62 P
ATOM 23 OP1 U A1455 -65.569 -83.809 77.903 1.00 98.34 O
ATOM 24 OP2 U A1455 -67.039 -85.883 77.521 1.00 99.61 O
ATOM 25 O5' U A1455 -67.171 -83.932 75.952 1.00 97.96 O
TER

ATOM 1 O3' U B1455 -69.961 -82.213 73.338 1.00 96.72 O
ATOM 2 P G B1456 -69.775 -81.959 71.766 1.00 97.05 P
ATOM 3 OP1 G B1456 -70.228 -80.567 71.493 1.00 96.38 O
ATOM 4 OP2 G B1456 -70.446 -83.082 71.065 1.00 97.54 O
ATOM 5 O5' G B1456 -68.197 -82.059 71.576 1.00 96.69 O
ATOM 6 C5' G B1456 -67.438 -80.934 71.159 1.00 95.82 C
ATOM 7 C4' G B1456 -66.349 -81.344 70.204 1.00 95.50 C
ATOM 8 O4' G B1456 -65.541 -82.380 70.814 1.00 96.06 O
ATOM 9 C3' G B1456 -66.815 -81.932 68.877 1.00 95.47 C
ATOM 10 O3' G B1456 -67.071 -80.917 67.909 1.00 94.74 O
ATOM 11 C2' G B1456 -65.683 -82.882 68.499 1.00 95.61 C
ATOM 12 O2' G B1456 -64.648 -82.190 67.829 1.00 94.87 O
ATOM 13 C1' G B1456 -65.161 -83.336 69.861 1.00 96.17 C
ATOM 14 N9 G B1456 -65.730 -84.625 70.261 1.00 97.07 N
ATOM 15 C8 G B1456 -66.835 -84.755 71.052 1.00 97.61 C
ATOM 16 N7 G B1456 -67.165 -85.999 71.254 1.00 98.40 N
ATOM 17 C5 G B1456 -66.208 -86.725 70.562 1.00 98.36 C
ATOM 18 C6 G B1456 -66.065 -88.121 70.431 1.00 99.04 C
ATOM 19 O6 G B1456 -66.788 -88.997 70.930 1.00 99.83 O
ATOM 20 N1 G B1456 -64.959 -88.437 69.643 1.00 98.75 N
ATOM 21 C2 G B1456 -64.123 -87.539 69.054 1.00 97.92 C
ATOM 22 N2 G B1456 -63.130 -88.041 68.327 1.00 97.80 N
ATOM 23 N3 G B1456 -64.256 -86.239 69.163 1.00 97.29 N
ATOM 24 C4 G B1456 -65.308 -85.896 69.936 1.00 97.55 C
ATOM 25 P A B1457 -67.309 -81.256 66.353 1.00 98.87 P
ATOM 26 OP1 A B1457 -67.639 -79.981 65.683 1.00 98.16 O
ATOM 27 OP2 A B1457 -68.287 -82.353 66.287 1.00 99.59 O
ATOM 28 O5' A B1457 -65.891 -81.771 65.861 1.00 98.70 O
TER

Atoms:
C2: (-62.424,-87.595,72.400)
OP1: (-63.074,-80.357,75.399)
OP2: (-60.782,-81.411,75.127)
C4: (-60.494,-87.281,71.221)
O5': (-62.771,-82.421,73.997)
C3': (-64.151,-84.513,75.489)
C1': (-63.440,-85.902,73.742)
O4': (-64.157,-84.847,73.134)
C5': (-64.179,-82.542,73.855)
P: (-62.110,-81.095,74.560)
O2: (-63.378,-88.255,72.778)
C4': (-64.642,-83.943,74.160)
C2': (-62.967,-85.366,75.082)
O2': (-62.663,-86.411,75.984)
N1: (-62.355,-86.294,72.852)
N3: (-61.492,-88.086,71.575)
N4: (-59.590,-87.820,70.400)
C6: (-61.330,-85.460,72.496)
C5: (-60.374,-85.919,71.676)
O3': (-65.149,-85.356,76.020)
OP1: (-70.228,-80.567,71.493)
OP2: (-70.446,-83.082,71.065)
C3': (-66.815,-81.932,68.877)
C1': (-65.161,-83.336,69.861)
C5': (-67.438,-80.934,71.159)
O6: (-66.788,-88.997,70.930)
O4': (-65.541,-82.380,70.814)
C8: (-66.835,-84.755,71.052)
C2: (-64.123,-87.539,69.054)
C6: (-66.065,-88.121,70.431)
C5: (-66.208,-86.725,70.562)
C4: (-65.308,-85.896,69.936)
P: (-69.775,-81.959,71.766)
C4': (-66.349,-81.344,70.204)
C2': (-65.683,-82.882,68.499)
O2': (-64.648,-82.190,67.829)
N1: (-64.959,-88.437,69.643)
N2: (-63.130,-88.041,68.327)
N3: (-64.256,-86.239,69.163)
N7: (-67.165,-85.999,71.254)
N9: (-65.730,-84.625,70.261)
O5': (-68.197,-82.059,71.576)
O3': (-67.071,-80.917,67.909)
Image (generated by PyMOL):
PyMOL image
show in jmol