Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQP:0539:0538
Extra
PDB:
ATOM 1 O3' C A 538 -2.340 133.318 77.757 1.00 53.58 O
ATOM 2 P A A 539 -2.123 131.729 77.619 1.00 52.25 P
ATOM 3 OP1 A A 539 -3.467 131.148 77.370 1.00 54.47 O
ATOM 4 OP2 A A 539 -1.327 131.251 78.769 1.00 52.10 O
ATOM 5 O5' A A 539 -1.232 131.545 76.307 1.00 49.97 O
ATOM 6 C5' A A 539 -1.759 131.797 74.988 1.00 44.90 C
ATOM 7 C4' A A 539 -0.648 131.704 73.965 1.00 45.82 C
ATOM 8 O4' A A 539 0.356 132.706 74.272 1.00 45.51 O
ATOM 9 C3' A A 539 0.111 130.385 73.964 1.00 45.46 C
ATOM 10 O3' A A 539 -0.528 129.428 73.122 1.00 42.85 O
ATOM 11 C2' A A 539 1.490 130.780 73.451 1.00 44.55 C
ATOM 12 O2' A A 539 1.542 130.911 72.050 1.00 41.28 O
ATOM 13 C1' A A 539 1.654 132.170 74.063 1.00 45.70 C
ATOM 14 N9 A A 539 2.382 132.227 75.333 1.00 46.37 N
ATOM 15 C8 A A 539 1.864 132.074 76.595 1.00 47.59 C
ATOM 16 N7 A A 539 2.739 132.254 77.550 1.00 46.66 N
ATOM 17 C5 A A 539 3.919 132.528 76.875 1.00 45.18 C
ATOM 18 C6 A A 539 5.213 132.826 77.326 1.00 43.91 C
ATOM 19 N6 A A 539 5.536 132.924 78.615 1.00 42.11 N
ATOM 20 N1 A A 539 6.172 133.032 76.397 1.00 42.67 N
ATOM 21 C2 A A 539 5.835 132.954 75.105 1.00 44.59 C
ATOM 22 N3 A A 539 4.649 132.697 74.558 1.00 44.83 N
ATOM 23 C4 A A 539 3.721 132.491 75.509 1.00 45.72 C
ATOM 24 P A A 540 -1.071 128.058 73.751 1.00 43.88 P
ATOM 25 OP1 A A 540 -2.197 127.599 72.899 1.00 45.25 O
ATOM 26 OP2 A A 540 -1.287 128.271 75.207 1.00 42.79 O
ATOM 27 O5' A A 540 0.132 127.036 73.573 1.00 42.36 O
TER
ATOM 1 O3' A B 537 0.114 135.857 82.909 1.00 56.37 O
ATOM 2 P C B 538 0.319 134.460 82.151 1.00 55.50 P
ATOM 3 OP1 C B 538 -0.618 133.482 82.755 1.00 57.29 O
ATOM 4 OP2 C B 538 1.773 134.162 82.124 1.00 56.26 O
ATOM 5 O5' C B 538 -0.134 134.754 80.652 1.00 56.37 O
ATOM 6 C5' C B 538 -1.491 135.115 80.325 1.00 54.61 C
ATOM 7 C4' C B 538 -1.612 135.354 78.837 1.00 54.76 C
ATOM 8 O4' C B 538 -0.687 136.406 78.456 1.00 56.43 O
ATOM 9 C3' C B 538 -1.226 134.177 77.954 1.00 54.27 C
ATOM 10 O3' C B 538 -2.340 133.318 77.757 1.00 53.58 O
ATOM 11 C2' C B 538 -0.813 134.852 76.653 1.00 55.60 C
ATOM 12 O2' C B 538 -1.916 135.192 75.843 1.00 56.69 O
ATOM 13 C1' C B 538 -0.164 136.139 77.166 1.00 56.44 C
ATOM 14 N1 C B 538 1.311 136.115 77.243 1.00 57.58 N
ATOM 15 C2 C B 538 2.051 136.516 76.121 1.00 57.12 C
ATOM 16 O2 C B 538 1.447 136.850 75.087 1.00 56.67 O
ATOM 17 N3 C B 538 3.404 136.530 76.192 1.00 57.85 N
ATOM 18 C4 C B 538 4.019 136.166 77.321 1.00 58.76 C
ATOM 19 N4 C B 538 5.356 136.220 77.353 1.00 58.74 N
ATOM 20 C5 C B 538 3.291 135.736 78.471 1.00 58.12 C
ATOM 21 C6 C B 538 1.954 135.724 78.388 1.00 58.02 C
ATOM 22 P A B 539 -2.123 131.729 77.619 1.00 52.25 P
ATOM 23 OP1 A B 539 -3.467 131.148 77.370 1.00 54.47 O
ATOM 24 OP2 A B 539 -1.327 131.251 78.769 1.00 52.10 O
ATOM 25 O5' A B 539 -1.232 131.545 76.307 1.00 49.97 O
TER
ATOM 2 P A A 539 -2.123 131.729 77.619 1.00 52.25 P
ATOM 3 OP1 A A 539 -3.467 131.148 77.370 1.00 54.47 O
ATOM 4 OP2 A A 539 -1.327 131.251 78.769 1.00 52.10 O
ATOM 5 O5' A A 539 -1.232 131.545 76.307 1.00 49.97 O
ATOM 6 C5' A A 539 -1.759 131.797 74.988 1.00 44.90 C
ATOM 7 C4' A A 539 -0.648 131.704 73.965 1.00 45.82 C
ATOM 8 O4' A A 539 0.356 132.706 74.272 1.00 45.51 O
ATOM 9 C3' A A 539 0.111 130.385 73.964 1.00 45.46 C
ATOM 10 O3' A A 539 -0.528 129.428 73.122 1.00 42.85 O
ATOM 11 C2' A A 539 1.490 130.780 73.451 1.00 44.55 C
ATOM 12 O2' A A 539 1.542 130.911 72.050 1.00 41.28 O
ATOM 13 C1' A A 539 1.654 132.170 74.063 1.00 45.70 C
ATOM 14 N9 A A 539 2.382 132.227 75.333 1.00 46.37 N
ATOM 15 C8 A A 539 1.864 132.074 76.595 1.00 47.59 C
ATOM 16 N7 A A 539 2.739 132.254 77.550 1.00 46.66 N
ATOM 17 C5 A A 539 3.919 132.528 76.875 1.00 45.18 C
ATOM 18 C6 A A 539 5.213 132.826 77.326 1.00 43.91 C
ATOM 19 N6 A A 539 5.536 132.924 78.615 1.00 42.11 N
ATOM 20 N1 A A 539 6.172 133.032 76.397 1.00 42.67 N
ATOM 21 C2 A A 539 5.835 132.954 75.105 1.00 44.59 C
ATOM 22 N3 A A 539 4.649 132.697 74.558 1.00 44.83 N
ATOM 23 C4 A A 539 3.721 132.491 75.509 1.00 45.72 C
ATOM 24 P A A 540 -1.071 128.058 73.751 1.00 43.88 P
ATOM 25 OP1 A A 540 -2.197 127.599 72.899 1.00 45.25 O
ATOM 26 OP2 A A 540 -1.287 128.271 75.207 1.00 42.79 O
ATOM 27 O5' A A 540 0.132 127.036 73.573 1.00 42.36 O
TER
ATOM 1 O3' A B 537 0.114 135.857 82.909 1.00 56.37 O
ATOM 2 P C B 538 0.319 134.460 82.151 1.00 55.50 P
ATOM 3 OP1 C B 538 -0.618 133.482 82.755 1.00 57.29 O
ATOM 4 OP2 C B 538 1.773 134.162 82.124 1.00 56.26 O
ATOM 5 O5' C B 538 -0.134 134.754 80.652 1.00 56.37 O
ATOM 6 C5' C B 538 -1.491 135.115 80.325 1.00 54.61 C
ATOM 7 C4' C B 538 -1.612 135.354 78.837 1.00 54.76 C
ATOM 8 O4' C B 538 -0.687 136.406 78.456 1.00 56.43 O
ATOM 9 C3' C B 538 -1.226 134.177 77.954 1.00 54.27 C
ATOM 10 O3' C B 538 -2.340 133.318 77.757 1.00 53.58 O
ATOM 11 C2' C B 538 -0.813 134.852 76.653 1.00 55.60 C
ATOM 12 O2' C B 538 -1.916 135.192 75.843 1.00 56.69 O
ATOM 13 C1' C B 538 -0.164 136.139 77.166 1.00 56.44 C
ATOM 14 N1 C B 538 1.311 136.115 77.243 1.00 57.58 N
ATOM 15 C2 C B 538 2.051 136.516 76.121 1.00 57.12 C
ATOM 16 O2 C B 538 1.447 136.850 75.087 1.00 56.67 O
ATOM 17 N3 C B 538 3.404 136.530 76.192 1.00 57.85 N
ATOM 18 C4 C B 538 4.019 136.166 77.321 1.00 58.76 C
ATOM 19 N4 C B 538 5.356 136.220 77.353 1.00 58.74 N
ATOM 20 C5 C B 538 3.291 135.736 78.471 1.00 58.12 C
ATOM 21 C6 C B 538 1.954 135.724 78.388 1.00 58.02 C
ATOM 22 P A B 539 -2.123 131.729 77.619 1.00 52.25 P
ATOM 23 OP1 A B 539 -3.467 131.148 77.370 1.00 54.47 O
ATOM 24 OP2 A B 539 -1.327 131.251 78.769 1.00 52.10 O
ATOM 25 O5' A B 539 -1.232 131.545 76.307 1.00 49.97 O
TER
Atoms:
OP1: (-3.467,131.148,77.370)
OP2: (-1.327,131.251,78.769)
C3': (0.111,130.385,73.964)
C1': (1.654,132.170,74.063)
C5': (-1.759,131.797,74.988)
O4': (0.356,132.706,74.272)
C8: (1.864,132.074,76.595)
O2': (1.542,130.911,72.050)
C6: (5.213,132.826,77.326)
C5: (3.919,132.528,76.875)
C4: (3.721,132.491,75.509)
P: (-2.123,131.729,77.619)
C4': (-0.648,131.704,73.965)
C2': (1.490,130.780,73.451)
C2: (5.835,132.954,75.105)
N1: (6.172,133.032,76.397)
N3: (4.649,132.697,74.558)
N6: (5.536,132.924,78.615)
N7: (2.739,132.254,77.550)
N9: (2.382,132.227,75.333)
O5': (-1.232,131.545,76.307)
O3': (-0.528,129.428,73.122)
OP2: (-1.327,131.251,78.769)
C3': (0.111,130.385,73.964)
C1': (1.654,132.170,74.063)
C5': (-1.759,131.797,74.988)
O4': (0.356,132.706,74.272)
C8: (1.864,132.074,76.595)
O2': (1.542,130.911,72.050)
C6: (5.213,132.826,77.326)
C5: (3.919,132.528,76.875)
C4: (3.721,132.491,75.509)
P: (-2.123,131.729,77.619)
C4': (-0.648,131.704,73.965)
C2': (1.490,130.780,73.451)
C2: (5.835,132.954,75.105)
N1: (6.172,133.032,76.397)
N3: (4.649,132.697,74.558)
N6: (5.536,132.924,78.615)
N7: (2.739,132.254,77.550)
N9: (2.382,132.227,75.333)
O5': (-1.232,131.545,76.307)
O3': (-0.528,129.428,73.122)
C2: (2.051,136.516,76.121)
OP1: (-0.618,133.482,82.755)
OP2: (1.773,134.162,82.124)
C4: (4.019,136.166,77.321)
O5': (-0.134,134.754,80.652)
C3': (-1.226,134.177,77.954)
C1': (-0.164,136.139,77.166)
O4': (-0.687,136.406,78.456)
C5': (-1.491,135.115,80.325)
P: (0.319,134.460,82.151)
O2: (1.447,136.850,75.087)
C4': (-1.612,135.354,78.837)
C2': (-0.813,134.852,76.653)
O2': (-1.916,135.192,75.843)
N1: (1.311,136.115,77.243)
N3: (3.404,136.530,76.192)
N4: (5.356,136.220,77.353)
C6: (1.954,135.724,78.388)
C5: (3.291,135.736,78.471)
O3': (-2.340,133.318,77.757)
OP1: (-0.618,133.482,82.755)
OP2: (1.773,134.162,82.124)
C4: (4.019,136.166,77.321)
O5': (-0.134,134.754,80.652)
C3': (-1.226,134.177,77.954)
C1': (-0.164,136.139,77.166)
O4': (-0.687,136.406,78.456)
C5': (-1.491,135.115,80.325)
P: (0.319,134.460,82.151)
O2: (1.447,136.850,75.087)
C4': (-1.612,135.354,78.837)
C2': (-0.813,134.852,76.653)
O2': (-1.916,135.192,75.843)
N1: (1.311,136.115,77.243)
N3: (3.404,136.530,76.192)
N4: (5.356,136.220,77.353)
C6: (1.954,135.724,78.388)
C5: (3.291,135.736,78.471)
O3': (-2.340,133.318,77.757)
Image (generated by PyMOL):