Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A1398:V33
Extra
PDB:
ATOM 1 O3' C A1397 -55.735 106.829 72.481 1.00 13.50 O
ATOM 2 P C A1398 -57.317 106.947 72.579 1.00 21.40 P
ATOM 3 OP1 C A1398 -57.853 106.728 71.229 1.00 21.40 O
ATOM 4 OP2 C A1398 -57.634 108.211 73.278 1.00 21.40 O
ATOM 5 O5' C A1398 -57.676 105.728 73.504 1.00 21.40 O
ATOM 6 C5' C A1398 -57.242 105.711 74.843 1.00 21.40 C
ATOM 7 C4' C A1398 -58.143 104.877 75.682 1.00 21.40 C
ATOM 8 O4' C A1398 -59.507 105.339 75.508 1.00 21.40 O
ATOM 9 C3' C A1398 -58.139 103.408 75.324 1.00 21.40 C
ATOM 10 O3' C A1398 -58.310 102.648 76.495 1.00 21.40 O
ATOM 11 C2' C A1398 -59.360 103.253 74.451 1.00 21.40 C
ATOM 12 O2' C A1398 -59.928 101.962 74.480 1.00 21.40 O
ATOM 13 C1' C A1398 -60.310 104.287 75.039 1.00 21.40 C
ATOM 14 N1 C A1398 -61.216 104.824 74.047 1.00 21.98 N
ATOM 15 C2 C A1398 -62.446 104.196 73.835 1.00 21.98 C
ATOM 16 O2 C A1398 -62.766 103.225 74.553 1.00 21.98 O
ATOM 17 N3 C A1398 -63.244 104.705 72.853 1.00 21.98 N
ATOM 18 C4 C A1398 -62.835 105.743 72.102 1.00 21.98 C
ATOM 19 N4 C A1398 -63.640 106.216 71.139 1.00 21.98 N
ATOM 20 C5 C A1398 -61.568 106.359 72.300 1.00 21.98 C
ATOM 21 C6 C A1398 -60.794 105.863 73.269 1.00 21.98 C
ATOM 22 P G A1399 -57.030 102.186 77.316 1.00 0.35 P
ATOM 23 OP1 G A1399 -57.434 100.991 78.117 1.00 0.35 O
ATOM 24 OP2 G A1399 -56.513 103.390 78.017 1.00 0.35 O
ATOM 25 O5' G A1399 -56.013 101.747 76.172 1.00 0.35 O
TER
ATOM 1 O3' U B 32 -65.207 112.925 73.308 1.00 29.02 O
ATOM 2 P G B 33 -65.940 112.094 72.148 1.00 25.13 P
ATOM 3 OP1 G B 33 -64.895 111.303 71.439 1.00 25.13 O
ATOM 4 OP2 G B 33 -66.742 113.063 71.367 1.00 25.13 O
ATOM 5 O5' G B 33 -66.899 111.120 72.963 1.00 25.13 O
ATOM 6 C5' G B 33 -67.718 110.187 72.284 1.00 25.13 C
ATOM 7 C4' G B 33 -67.593 108.808 72.870 1.00 25.13 C
ATOM 8 O4' G B 33 -66.277 108.270 72.608 1.00 25.13 O
ATOM 9 C3' G B 33 -67.731 108.720 74.369 1.00 25.13 C
ATOM 10 O3' G B 33 -69.075 108.763 74.792 1.00 25.13 O
ATOM 11 C2' G B 33 -67.014 107.420 74.703 1.00 25.13 C
ATOM 12 O2' G B 33 -67.865 106.307 74.505 1.00 25.13 O
ATOM 13 C1' G B 33 -65.908 107.390 73.644 1.00 25.13 C
ATOM 14 N9 G B 33 -64.601 107.817 74.171 1.00 25.46 N
ATOM 15 C8 G B 33 -63.876 108.894 73.724 1.00 25.46 C
ATOM 16 N7 G B 33 -62.732 109.045 74.337 1.00 25.46 N
ATOM 17 C5 G B 33 -62.692 107.986 75.248 1.00 25.46 C
ATOM 18 C6 G B 33 -61.683 107.620 76.208 1.00 25.46 C
ATOM 19 O6 G B 33 -60.590 108.168 76.462 1.00 25.46 O
ATOM 20 N1 G B 33 -62.057 106.484 76.929 1.00 25.46 N
ATOM 21 C2 G B 33 -63.242 105.795 76.748 1.00 25.46 C
ATOM 22 N2 G B 33 -63.403 104.735 77.551 1.00 25.46 N
ATOM 23 N3 G B 33 -64.187 106.114 75.859 1.00 25.46 N
ATOM 24 C4 G B 33 -63.846 107.215 75.148 1.00 25.46 C
ATOM 25 P A B 34 -69.520 109.867 75.863 1.00 29.74 P
ATOM 26 OP1 A B 34 -71.002 109.848 75.943 1.00 29.74 O
ATOM 27 OP2 A B 34 -68.841 111.147 75.485 1.00 29.74 O
ATOM 28 O5' A B 34 -68.906 109.281 77.212 1.00 29.74 O
TER
ATOM 2 P C A1398 -57.317 106.947 72.579 1.00 21.40 P
ATOM 3 OP1 C A1398 -57.853 106.728 71.229 1.00 21.40 O
ATOM 4 OP2 C A1398 -57.634 108.211 73.278 1.00 21.40 O
ATOM 5 O5' C A1398 -57.676 105.728 73.504 1.00 21.40 O
ATOM 6 C5' C A1398 -57.242 105.711 74.843 1.00 21.40 C
ATOM 7 C4' C A1398 -58.143 104.877 75.682 1.00 21.40 C
ATOM 8 O4' C A1398 -59.507 105.339 75.508 1.00 21.40 O
ATOM 9 C3' C A1398 -58.139 103.408 75.324 1.00 21.40 C
ATOM 10 O3' C A1398 -58.310 102.648 76.495 1.00 21.40 O
ATOM 11 C2' C A1398 -59.360 103.253 74.451 1.00 21.40 C
ATOM 12 O2' C A1398 -59.928 101.962 74.480 1.00 21.40 O
ATOM 13 C1' C A1398 -60.310 104.287 75.039 1.00 21.40 C
ATOM 14 N1 C A1398 -61.216 104.824 74.047 1.00 21.98 N
ATOM 15 C2 C A1398 -62.446 104.196 73.835 1.00 21.98 C
ATOM 16 O2 C A1398 -62.766 103.225 74.553 1.00 21.98 O
ATOM 17 N3 C A1398 -63.244 104.705 72.853 1.00 21.98 N
ATOM 18 C4 C A1398 -62.835 105.743 72.102 1.00 21.98 C
ATOM 19 N4 C A1398 -63.640 106.216 71.139 1.00 21.98 N
ATOM 20 C5 C A1398 -61.568 106.359 72.300 1.00 21.98 C
ATOM 21 C6 C A1398 -60.794 105.863 73.269 1.00 21.98 C
ATOM 22 P G A1399 -57.030 102.186 77.316 1.00 0.35 P
ATOM 23 OP1 G A1399 -57.434 100.991 78.117 1.00 0.35 O
ATOM 24 OP2 G A1399 -56.513 103.390 78.017 1.00 0.35 O
ATOM 25 O5' G A1399 -56.013 101.747 76.172 1.00 0.35 O
TER
ATOM 1 O3' U B 32 -65.207 112.925 73.308 1.00 29.02 O
ATOM 2 P G B 33 -65.940 112.094 72.148 1.00 25.13 P
ATOM 3 OP1 G B 33 -64.895 111.303 71.439 1.00 25.13 O
ATOM 4 OP2 G B 33 -66.742 113.063 71.367 1.00 25.13 O
ATOM 5 O5' G B 33 -66.899 111.120 72.963 1.00 25.13 O
ATOM 6 C5' G B 33 -67.718 110.187 72.284 1.00 25.13 C
ATOM 7 C4' G B 33 -67.593 108.808 72.870 1.00 25.13 C
ATOM 8 O4' G B 33 -66.277 108.270 72.608 1.00 25.13 O
ATOM 9 C3' G B 33 -67.731 108.720 74.369 1.00 25.13 C
ATOM 10 O3' G B 33 -69.075 108.763 74.792 1.00 25.13 O
ATOM 11 C2' G B 33 -67.014 107.420 74.703 1.00 25.13 C
ATOM 12 O2' G B 33 -67.865 106.307 74.505 1.00 25.13 O
ATOM 13 C1' G B 33 -65.908 107.390 73.644 1.00 25.13 C
ATOM 14 N9 G B 33 -64.601 107.817 74.171 1.00 25.46 N
ATOM 15 C8 G B 33 -63.876 108.894 73.724 1.00 25.46 C
ATOM 16 N7 G B 33 -62.732 109.045 74.337 1.00 25.46 N
ATOM 17 C5 G B 33 -62.692 107.986 75.248 1.00 25.46 C
ATOM 18 C6 G B 33 -61.683 107.620 76.208 1.00 25.46 C
ATOM 19 O6 G B 33 -60.590 108.168 76.462 1.00 25.46 O
ATOM 20 N1 G B 33 -62.057 106.484 76.929 1.00 25.46 N
ATOM 21 C2 G B 33 -63.242 105.795 76.748 1.00 25.46 C
ATOM 22 N2 G B 33 -63.403 104.735 77.551 1.00 25.46 N
ATOM 23 N3 G B 33 -64.187 106.114 75.859 1.00 25.46 N
ATOM 24 C4 G B 33 -63.846 107.215 75.148 1.00 25.46 C
ATOM 25 P A B 34 -69.520 109.867 75.863 1.00 29.74 P
ATOM 26 OP1 A B 34 -71.002 109.848 75.943 1.00 29.74 O
ATOM 27 OP2 A B 34 -68.841 111.147 75.485 1.00 29.74 O
ATOM 28 O5' A B 34 -68.906 109.281 77.212 1.00 29.74 O
TER
Atoms:
C2: (-62.446,104.196,73.835)
OP1: (-57.853,106.728,71.229)
OP2: (-57.634,108.211,73.278)
C4: (-62.835,105.743,72.102)
O5': (-57.676,105.728,73.504)
C3': (-58.139,103.408,75.324)
C1': (-60.310,104.287,75.039)
O4': (-59.507,105.339,75.508)
C5': (-57.242,105.711,74.843)
P: (-57.317,106.947,72.579)
O2: (-62.766,103.225,74.553)
C4': (-58.143,104.877,75.682)
C2': (-59.360,103.253,74.451)
O2': (-59.928,101.962,74.480)
N1: (-61.216,104.824,74.047)
N3: (-63.244,104.705,72.853)
N4: (-63.640,106.216,71.139)
C6: (-60.794,105.863,73.269)
C5: (-61.568,106.359,72.300)
O3': (-58.310,102.648,76.495)
OP1: (-57.853,106.728,71.229)
OP2: (-57.634,108.211,73.278)
C4: (-62.835,105.743,72.102)
O5': (-57.676,105.728,73.504)
C3': (-58.139,103.408,75.324)
C1': (-60.310,104.287,75.039)
O4': (-59.507,105.339,75.508)
C5': (-57.242,105.711,74.843)
P: (-57.317,106.947,72.579)
O2: (-62.766,103.225,74.553)
C4': (-58.143,104.877,75.682)
C2': (-59.360,103.253,74.451)
O2': (-59.928,101.962,74.480)
N1: (-61.216,104.824,74.047)
N3: (-63.244,104.705,72.853)
N4: (-63.640,106.216,71.139)
C6: (-60.794,105.863,73.269)
C5: (-61.568,106.359,72.300)
O3': (-58.310,102.648,76.495)
OP1: (-64.895,111.303,71.439)
OP2: (-66.742,113.063,71.367)
C3': (-67.731,108.720,74.369)
C1': (-65.908,107.390,73.644)
C5': (-67.718,110.187,72.284)
O6: (-60.590,108.168,76.462)
O4': (-66.277,108.270,72.608)
C8: (-63.876,108.894,73.724)
C2: (-63.242,105.795,76.748)
C6: (-61.683,107.620,76.208)
C5: (-62.692,107.986,75.248)
C4: (-63.846,107.215,75.148)
P: (-65.940,112.094,72.148)
C4': (-67.593,108.808,72.870)
C2': (-67.014,107.420,74.703)
O2': (-67.865,106.307,74.505)
N1: (-62.057,106.484,76.929)
N2: (-63.403,104.735,77.551)
N3: (-64.187,106.114,75.859)
N7: (-62.732,109.045,74.337)
N9: (-64.601,107.817,74.171)
O5': (-66.899,111.120,72.963)
O3': (-69.075,108.763,74.792)
OP2: (-66.742,113.063,71.367)
C3': (-67.731,108.720,74.369)
C1': (-65.908,107.390,73.644)
C5': (-67.718,110.187,72.284)
O6: (-60.590,108.168,76.462)
O4': (-66.277,108.270,72.608)
C8: (-63.876,108.894,73.724)
C2: (-63.242,105.795,76.748)
C6: (-61.683,107.620,76.208)
C5: (-62.692,107.986,75.248)
C4: (-63.846,107.215,75.148)
P: (-65.940,112.094,72.148)
C4': (-67.593,108.808,72.870)
C2': (-67.014,107.420,74.703)
O2': (-67.865,106.307,74.505)
N1: (-62.057,106.484,76.929)
N2: (-63.403,104.735,77.551)
N3: (-64.187,106.114,75.859)
N7: (-62.732,109.045,74.337)
N9: (-64.601,107.817,74.171)
O5': (-66.899,111.120,72.963)
O3': (-69.075,108.763,74.792)
Image (generated by PyMOL):