Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:01086:01018
Extra
PDB:
ATOM 1 O3' C A1085 45.638 99.180 111.721 1.00 46.18 O
ATOM 2 P C A1086 47.084 99.153 111.021 1.00 47.88 P
ATOM 3 OP1 C A1086 46.990 99.937 109.763 1.00 48.07 O
ATOM 4 OP2 C A1086 47.559 97.743 110.975 1.00 45.61 O
ATOM 5 O5' C A1086 47.986 99.986 112.032 1.00 46.00 O
ATOM 6 C5' C A1086 49.356 99.653 112.269 1.00 42.50 C
ATOM 7 C4' C A1086 50.107 100.893 112.669 1.00 42.95 C
ATOM 8 O4' C A1086 50.280 101.735 111.506 1.00 41.20 O
ATOM 9 C3' C A1086 49.401 101.770 113.696 1.00 41.57 C
ATOM 10 O3' C A1086 49.723 101.350 115.027 1.00 42.51 O
ATOM 11 C2' C A1086 49.984 103.149 113.411 1.00 40.72 C
ATOM 12 O2' C A1086 51.210 103.359 114.074 1.00 41.95 O
ATOM 13 C1' C A1086 50.208 103.094 111.892 1.00 40.46 C
ATOM 14 N1 C A1086 49.168 103.754 111.076 1.00 40.59 N
ATOM 15 C2 C A1086 48.972 105.137 111.209 1.00 39.53 C
ATOM 16 O2 C A1086 49.687 105.775 111.995 1.00 39.51 O
ATOM 17 N3 C A1086 48.014 105.740 110.472 1.00 37.98 N
ATOM 18 C4 C A1086 47.284 105.025 109.617 1.00 36.54 C
ATOM 19 N4 C A1086 46.369 105.664 108.898 1.00 38.51 N
ATOM 20 C5 C A1086 47.465 103.624 109.458 1.00 36.80 C
ATOM 21 C6 C A1086 48.403 103.033 110.200 1.00 37.47 C
ATOM 22 P U A1087 48.555 101.024 116.086 1.00 44.28 P
ATOM 23 OP1 U A1087 49.169 101.027 117.433 1.00 42.65 O
ATOM 24 OP2 U A1087 47.823 99.810 115.613 1.00 41.83 O
ATOM 25 O5' U A1087 47.587 102.282 116.000 1.00 41.41 O
TER
ATOM 1 O3' A B1017 54.583 98.764 109.996 1.00 43.13 O
ATOM 2 P G B1018 53.298 97.910 110.454 1.00 42.98 P
ATOM 3 OP1 G B1018 52.869 98.430 111.790 1.00 38.83 O
ATOM 4 OP2 G B1018 53.606 96.463 110.281 1.00 42.30 O
ATOM 5 O5' G B1018 52.197 98.290 109.371 1.00 41.30 O
ATOM 6 C5' G B1018 51.712 99.632 109.264 1.00 39.55 C
ATOM 7 C4' G B1018 51.826 100.112 107.841 1.00 38.16 C
ATOM 8 O4' G B1018 51.242 101.441 107.755 1.00 37.43 O
ATOM 9 C3' G B1018 53.249 100.245 107.309 1.00 37.25 C
ATOM 10 O3' G B1018 53.223 100.063 105.896 1.00 37.79 O
ATOM 11 C2' G B1018 53.566 101.703 107.627 1.00 38.12 C
ATOM 12 O2' G B1018 54.590 102.231 106.814 1.00 40.77 O
ATOM 13 C1' G B1018 52.220 102.357 107.316 1.00 37.25 C
ATOM 14 N9 G B1018 51.930 103.656 107.917 1.00 36.90 N
ATOM 15 C8 G B1018 52.610 104.313 108.913 1.00 37.25 C
ATOM 16 N7 G B1018 52.083 105.470 109.214 1.00 36.73 N
ATOM 17 C5 G B1018 50.990 105.579 108.371 1.00 36.04 C
ATOM 18 C6 G B1018 50.032 106.614 108.232 1.00 37.80 C
ATOM 19 O6 G B1018 49.945 107.679 108.858 1.00 39.99 O
ATOM 20 N1 G B1018 49.100 106.316 107.244 1.00 38.06 N
ATOM 21 C2 G B1018 49.086 105.172 106.489 1.00 38.78 C
ATOM 22 N2 G B1018 48.109 105.071 105.580 1.00 41.55 N
ATOM 23 N3 G B1018 49.965 104.200 106.613 1.00 38.73 N
ATOM 24 C4 G B1018 50.883 104.468 107.565 1.00 37.61 C
ATOM 25 P C B1019 54.011 98.835 105.222 1.00 42.03 P
ATOM 26 OP1 C B1019 53.597 98.764 103.795 1.00 42.17 O
ATOM 27 OP2 C B1019 53.840 97.643 106.087 1.00 42.00 O
ATOM 28 O5' C B1019 55.532 99.316 105.204 1.00 41.40 O
TER
ATOM 2 P C A1086 47.084 99.153 111.021 1.00 47.88 P
ATOM 3 OP1 C A1086 46.990 99.937 109.763 1.00 48.07 O
ATOM 4 OP2 C A1086 47.559 97.743 110.975 1.00 45.61 O
ATOM 5 O5' C A1086 47.986 99.986 112.032 1.00 46.00 O
ATOM 6 C5' C A1086 49.356 99.653 112.269 1.00 42.50 C
ATOM 7 C4' C A1086 50.107 100.893 112.669 1.00 42.95 C
ATOM 8 O4' C A1086 50.280 101.735 111.506 1.00 41.20 O
ATOM 9 C3' C A1086 49.401 101.770 113.696 1.00 41.57 C
ATOM 10 O3' C A1086 49.723 101.350 115.027 1.00 42.51 O
ATOM 11 C2' C A1086 49.984 103.149 113.411 1.00 40.72 C
ATOM 12 O2' C A1086 51.210 103.359 114.074 1.00 41.95 O
ATOM 13 C1' C A1086 50.208 103.094 111.892 1.00 40.46 C
ATOM 14 N1 C A1086 49.168 103.754 111.076 1.00 40.59 N
ATOM 15 C2 C A1086 48.972 105.137 111.209 1.00 39.53 C
ATOM 16 O2 C A1086 49.687 105.775 111.995 1.00 39.51 O
ATOM 17 N3 C A1086 48.014 105.740 110.472 1.00 37.98 N
ATOM 18 C4 C A1086 47.284 105.025 109.617 1.00 36.54 C
ATOM 19 N4 C A1086 46.369 105.664 108.898 1.00 38.51 N
ATOM 20 C5 C A1086 47.465 103.624 109.458 1.00 36.80 C
ATOM 21 C6 C A1086 48.403 103.033 110.200 1.00 37.47 C
ATOM 22 P U A1087 48.555 101.024 116.086 1.00 44.28 P
ATOM 23 OP1 U A1087 49.169 101.027 117.433 1.00 42.65 O
ATOM 24 OP2 U A1087 47.823 99.810 115.613 1.00 41.83 O
ATOM 25 O5' U A1087 47.587 102.282 116.000 1.00 41.41 O
TER
ATOM 1 O3' A B1017 54.583 98.764 109.996 1.00 43.13 O
ATOM 2 P G B1018 53.298 97.910 110.454 1.00 42.98 P
ATOM 3 OP1 G B1018 52.869 98.430 111.790 1.00 38.83 O
ATOM 4 OP2 G B1018 53.606 96.463 110.281 1.00 42.30 O
ATOM 5 O5' G B1018 52.197 98.290 109.371 1.00 41.30 O
ATOM 6 C5' G B1018 51.712 99.632 109.264 1.00 39.55 C
ATOM 7 C4' G B1018 51.826 100.112 107.841 1.00 38.16 C
ATOM 8 O4' G B1018 51.242 101.441 107.755 1.00 37.43 O
ATOM 9 C3' G B1018 53.249 100.245 107.309 1.00 37.25 C
ATOM 10 O3' G B1018 53.223 100.063 105.896 1.00 37.79 O
ATOM 11 C2' G B1018 53.566 101.703 107.627 1.00 38.12 C
ATOM 12 O2' G B1018 54.590 102.231 106.814 1.00 40.77 O
ATOM 13 C1' G B1018 52.220 102.357 107.316 1.00 37.25 C
ATOM 14 N9 G B1018 51.930 103.656 107.917 1.00 36.90 N
ATOM 15 C8 G B1018 52.610 104.313 108.913 1.00 37.25 C
ATOM 16 N7 G B1018 52.083 105.470 109.214 1.00 36.73 N
ATOM 17 C5 G B1018 50.990 105.579 108.371 1.00 36.04 C
ATOM 18 C6 G B1018 50.032 106.614 108.232 1.00 37.80 C
ATOM 19 O6 G B1018 49.945 107.679 108.858 1.00 39.99 O
ATOM 20 N1 G B1018 49.100 106.316 107.244 1.00 38.06 N
ATOM 21 C2 G B1018 49.086 105.172 106.489 1.00 38.78 C
ATOM 22 N2 G B1018 48.109 105.071 105.580 1.00 41.55 N
ATOM 23 N3 G B1018 49.965 104.200 106.613 1.00 38.73 N
ATOM 24 C4 G B1018 50.883 104.468 107.565 1.00 37.61 C
ATOM 25 P C B1019 54.011 98.835 105.222 1.00 42.03 P
ATOM 26 OP1 C B1019 53.597 98.764 103.795 1.00 42.17 O
ATOM 27 OP2 C B1019 53.840 97.643 106.087 1.00 42.00 O
ATOM 28 O5' C B1019 55.532 99.316 105.204 1.00 41.40 O
TER
Atoms:
C2: (48.972,105.137,111.209)
OP1: (46.990,99.937,109.763)
OP2: (47.559,97.743,110.975)
C4: (47.284,105.025,109.617)
O5': (47.986,99.986,112.032)
C3': (49.401,101.770,113.696)
C1': (50.208,103.094,111.892)
O4': (50.280,101.735,111.506)
C5': (49.356,99.653,112.269)
P: (47.084,99.153,111.021)
O2: (49.687,105.775,111.995)
C4': (50.107,100.893,112.669)
C2': (49.984,103.149,113.411)
O2': (51.210,103.359,114.074)
N1: (49.168,103.754,111.076)
N3: (48.014,105.740,110.472)
N4: (46.369,105.664,108.898)
C6: (48.403,103.033,110.200)
C5: (47.465,103.624,109.458)
O3': (49.723,101.350,115.027)
OP1: (46.990,99.937,109.763)
OP2: (47.559,97.743,110.975)
C4: (47.284,105.025,109.617)
O5': (47.986,99.986,112.032)
C3': (49.401,101.770,113.696)
C1': (50.208,103.094,111.892)
O4': (50.280,101.735,111.506)
C5': (49.356,99.653,112.269)
P: (47.084,99.153,111.021)
O2: (49.687,105.775,111.995)
C4': (50.107,100.893,112.669)
C2': (49.984,103.149,113.411)
O2': (51.210,103.359,114.074)
N1: (49.168,103.754,111.076)
N3: (48.014,105.740,110.472)
N4: (46.369,105.664,108.898)
C6: (48.403,103.033,110.200)
C5: (47.465,103.624,109.458)
O3': (49.723,101.350,115.027)
OP1: (52.869,98.430,111.790)
OP2: (53.606,96.463,110.281)
C3': (53.249,100.245,107.309)
C1': (52.220,102.357,107.316)
C5': (51.712,99.632,109.264)
O6: (49.945,107.679,108.858)
O4': (51.242,101.441,107.755)
C8: (52.610,104.313,108.913)
C2: (49.086,105.172,106.489)
C6: (50.032,106.614,108.232)
C5: (50.990,105.579,108.371)
C4: (50.883,104.468,107.565)
P: (53.298,97.910,110.454)
C4': (51.826,100.112,107.841)
C2': (53.566,101.703,107.627)
O2': (54.590,102.231,106.814)
N1: (49.100,106.316,107.244)
N2: (48.109,105.071,105.580)
N3: (49.965,104.200,106.613)
N7: (52.083,105.470,109.214)
N9: (51.930,103.656,107.917)
O5': (52.197,98.290,109.371)
O3': (53.223,100.063,105.896)
OP2: (53.606,96.463,110.281)
C3': (53.249,100.245,107.309)
C1': (52.220,102.357,107.316)
C5': (51.712,99.632,109.264)
O6: (49.945,107.679,108.858)
O4': (51.242,101.441,107.755)
C8: (52.610,104.313,108.913)
C2: (49.086,105.172,106.489)
C6: (50.032,106.614,108.232)
C5: (50.990,105.579,108.371)
C4: (50.883,104.468,107.565)
P: (53.298,97.910,110.454)
C4': (51.826,100.112,107.841)
C2': (53.566,101.703,107.627)
O2': (54.590,102.231,106.814)
N1: (49.100,106.316,107.244)
N2: (48.109,105.071,105.580)
N3: (49.965,104.200,106.613)
N7: (52.083,105.470,109.214)
N9: (51.930,103.656,107.917)
O5': (52.197,98.290,109.371)
O3': (53.223,100.063,105.896)
Image (generated by PyMOL):