Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VFG:D4:D3
Extra
PDB:
ATOM 1 O3' C A 3 76.785 38.851 12.024 1.00139.82 O
ATOM 2 P A A 4 77.169 40.154 12.889 1.00142.42 P
ATOM 3 OP1 A A 4 78.401 40.762 12.308 1.00142.23 O
ATOM 4 OP2 A A 4 77.142 39.771 14.327 1.00142.40 O
ATOM 5 O5' A A 4 75.960 41.164 12.659 1.00142.27 O
ATOM 6 C5' A A 4 74.880 41.233 13.587 1.00142.15 C
ATOM 7 C4' A A 4 73.676 40.563 12.994 1.00142.15 C
ATOM 8 O4' A A 4 73.420 39.335 13.731 1.00141.48 O
ATOM 9 C3' A A 4 72.392 41.352 13.209 1.00142.66 C
ATOM 10 O3' A A 4 72.243 42.335 12.190 1.00144.53 O
ATOM 11 C2' A A 4 71.321 40.278 13.091 1.00141.82 C
ATOM 12 O2' A A 4 70.937 40.009 11.757 1.00141.68 O
ATOM 13 C1' A A 4 72.030 39.073 13.706 1.00140.96 C
ATOM 14 N9 A A 4 71.538 38.662 15.019 1.00139.85 N
ATOM 15 C8 A A 4 72.143 38.417 16.233 1.00139.71 C
ATOM 16 N7 A A 4 71.311 37.979 17.156 1.00139.11 N
ATOM 17 C5 A A 4 70.084 37.948 16.502 1.00138.64 C
ATOM 18 C6 A A 4 68.792 37.565 16.900 1.00138.24 C
ATOM 19 N6 A A 4 68.474 37.082 18.101 1.00137.78 N
ATOM 20 N1 A A 4 67.805 37.692 15.991 1.00138.05 N
ATOM 21 C2 A A 4 68.090 38.148 14.776 1.00137.67 C
ATOM 22 N3 A A 4 69.248 38.513 14.276 1.00137.77 N
ATOM 23 C4 A A 4 70.214 38.390 15.199 1.00138.82 C
ATOM 24 P G A 5 72.033 43.873 12.600 1.00145.87 P
ATOM 25 OP1 G A 5 72.450 44.703 11.438 1.00145.76 O
ATOM 26 OP2 G A 5 72.663 44.080 13.931 1.00145.36 O
ATOM 27 O5' G A 5 70.460 44.032 12.789 1.00146.64 O
TER
ATOM 1 O3' C B 2 77.782 34.005 17.134 1.00128.31 O
ATOM 2 P C B 3 77.106 35.439 16.828 1.00130.37 P
ATOM 3 OP1 C B 3 77.787 36.470 17.655 1.00130.35 O
ATOM 4 OP2 C B 3 75.637 35.265 16.952 1.00130.81 O
ATOM 5 O5' C B 3 77.455 35.705 15.289 1.00131.96 O
ATOM 6 C5' C B 3 77.149 36.957 14.670 1.00134.28 C
ATOM 7 C4' C B 3 76.770 36.764 13.214 1.00135.89 C
ATOM 8 O4' C B 3 76.026 35.534 13.044 1.00136.29 O
ATOM 9 C3' C B 3 75.928 37.860 12.580 1.00136.99 C
ATOM 10 O3' C B 3 76.785 38.851 12.024 1.00139.82 O
ATOM 11 C2' C B 3 75.209 37.103 11.467 1.00136.42 C
ATOM 12 O2' C B 3 75.993 36.963 10.296 1.00135.06 O
ATOM 13 C1' C B 3 74.968 35.738 12.125 1.00136.39 C
ATOM 14 N1 C B 3 73.716 35.576 12.900 1.00136.81 N
ATOM 15 C2 C B 3 72.460 35.881 12.322 1.00136.96 C
ATOM 16 O2 C B 3 72.406 36.319 11.159 1.00137.41 O
ATOM 17 N3 C B 3 71.337 35.686 13.062 1.00136.64 N
ATOM 18 C4 C B 3 71.429 35.221 14.313 1.00136.59 C
ATOM 19 N4 C B 3 70.302 35.036 14.999 1.00136.51 N
ATOM 20 C5 C B 3 72.682 34.922 14.918 1.00136.42 C
ATOM 21 C6 C B 3 73.784 35.113 14.186 1.00136.54 C
ATOM 22 P A B 4 77.169 40.154 12.889 1.00142.42 P
ATOM 23 OP1 A B 4 78.401 40.762 12.308 1.00142.23 O
ATOM 24 OP2 A B 4 77.142 39.771 14.327 1.00142.40 O
ATOM 25 O5' A B 4 75.960 41.164 12.659 1.00142.27 O
TER
ATOM 2 P A A 4 77.169 40.154 12.889 1.00142.42 P
ATOM 3 OP1 A A 4 78.401 40.762 12.308 1.00142.23 O
ATOM 4 OP2 A A 4 77.142 39.771 14.327 1.00142.40 O
ATOM 5 O5' A A 4 75.960 41.164 12.659 1.00142.27 O
ATOM 6 C5' A A 4 74.880 41.233 13.587 1.00142.15 C
ATOM 7 C4' A A 4 73.676 40.563 12.994 1.00142.15 C
ATOM 8 O4' A A 4 73.420 39.335 13.731 1.00141.48 O
ATOM 9 C3' A A 4 72.392 41.352 13.209 1.00142.66 C
ATOM 10 O3' A A 4 72.243 42.335 12.190 1.00144.53 O
ATOM 11 C2' A A 4 71.321 40.278 13.091 1.00141.82 C
ATOM 12 O2' A A 4 70.937 40.009 11.757 1.00141.68 O
ATOM 13 C1' A A 4 72.030 39.073 13.706 1.00140.96 C
ATOM 14 N9 A A 4 71.538 38.662 15.019 1.00139.85 N
ATOM 15 C8 A A 4 72.143 38.417 16.233 1.00139.71 C
ATOM 16 N7 A A 4 71.311 37.979 17.156 1.00139.11 N
ATOM 17 C5 A A 4 70.084 37.948 16.502 1.00138.64 C
ATOM 18 C6 A A 4 68.792 37.565 16.900 1.00138.24 C
ATOM 19 N6 A A 4 68.474 37.082 18.101 1.00137.78 N
ATOM 20 N1 A A 4 67.805 37.692 15.991 1.00138.05 N
ATOM 21 C2 A A 4 68.090 38.148 14.776 1.00137.67 C
ATOM 22 N3 A A 4 69.248 38.513 14.276 1.00137.77 N
ATOM 23 C4 A A 4 70.214 38.390 15.199 1.00138.82 C
ATOM 24 P G A 5 72.033 43.873 12.600 1.00145.87 P
ATOM 25 OP1 G A 5 72.450 44.703 11.438 1.00145.76 O
ATOM 26 OP2 G A 5 72.663 44.080 13.931 1.00145.36 O
ATOM 27 O5' G A 5 70.460 44.032 12.789 1.00146.64 O
TER
ATOM 1 O3' C B 2 77.782 34.005 17.134 1.00128.31 O
ATOM 2 P C B 3 77.106 35.439 16.828 1.00130.37 P
ATOM 3 OP1 C B 3 77.787 36.470 17.655 1.00130.35 O
ATOM 4 OP2 C B 3 75.637 35.265 16.952 1.00130.81 O
ATOM 5 O5' C B 3 77.455 35.705 15.289 1.00131.96 O
ATOM 6 C5' C B 3 77.149 36.957 14.670 1.00134.28 C
ATOM 7 C4' C B 3 76.770 36.764 13.214 1.00135.89 C
ATOM 8 O4' C B 3 76.026 35.534 13.044 1.00136.29 O
ATOM 9 C3' C B 3 75.928 37.860 12.580 1.00136.99 C
ATOM 10 O3' C B 3 76.785 38.851 12.024 1.00139.82 O
ATOM 11 C2' C B 3 75.209 37.103 11.467 1.00136.42 C
ATOM 12 O2' C B 3 75.993 36.963 10.296 1.00135.06 O
ATOM 13 C1' C B 3 74.968 35.738 12.125 1.00136.39 C
ATOM 14 N1 C B 3 73.716 35.576 12.900 1.00136.81 N
ATOM 15 C2 C B 3 72.460 35.881 12.322 1.00136.96 C
ATOM 16 O2 C B 3 72.406 36.319 11.159 1.00137.41 O
ATOM 17 N3 C B 3 71.337 35.686 13.062 1.00136.64 N
ATOM 18 C4 C B 3 71.429 35.221 14.313 1.00136.59 C
ATOM 19 N4 C B 3 70.302 35.036 14.999 1.00136.51 N
ATOM 20 C5 C B 3 72.682 34.922 14.918 1.00136.42 C
ATOM 21 C6 C B 3 73.784 35.113 14.186 1.00136.54 C
ATOM 22 P A B 4 77.169 40.154 12.889 1.00142.42 P
ATOM 23 OP1 A B 4 78.401 40.762 12.308 1.00142.23 O
ATOM 24 OP2 A B 4 77.142 39.771 14.327 1.00142.40 O
ATOM 25 O5' A B 4 75.960 41.164 12.659 1.00142.27 O
TER
Atoms:
OP1: (78.401,40.762,12.308)
OP2: (77.142,39.771,14.327)
C3': (72.392,41.352,13.209)
C1': (72.030,39.073,13.706)
C5': (74.880,41.233,13.587)
O4': (73.420,39.335,13.731)
C8: (72.143,38.417,16.233)
O2': (70.937,40.009,11.757)
C6: (68.792,37.565,16.900)
C5: (70.084,37.948,16.502)
C4: (70.214,38.390,15.199)
P: (77.169,40.154,12.889)
C4': (73.676,40.563,12.994)
C2': (71.321,40.278,13.091)
C2: (68.090,38.148,14.776)
N1: (67.805,37.692,15.991)
N3: (69.248,38.513,14.276)
N6: (68.474,37.082,18.101)
N7: (71.311,37.979,17.156)
N9: (71.538,38.662,15.019)
O5': (75.960,41.164,12.659)
O3': (72.243,42.335,12.190)
OP2: (77.142,39.771,14.327)
C3': (72.392,41.352,13.209)
C1': (72.030,39.073,13.706)
C5': (74.880,41.233,13.587)
O4': (73.420,39.335,13.731)
C8: (72.143,38.417,16.233)
O2': (70.937,40.009,11.757)
C6: (68.792,37.565,16.900)
C5: (70.084,37.948,16.502)
C4: (70.214,38.390,15.199)
P: (77.169,40.154,12.889)
C4': (73.676,40.563,12.994)
C2': (71.321,40.278,13.091)
C2: (68.090,38.148,14.776)
N1: (67.805,37.692,15.991)
N3: (69.248,38.513,14.276)
N6: (68.474,37.082,18.101)
N7: (71.311,37.979,17.156)
N9: (71.538,38.662,15.019)
O5': (75.960,41.164,12.659)
O3': (72.243,42.335,12.190)
C2: (72.460,35.881,12.322)
OP1: (77.787,36.470,17.655)
OP2: (75.637,35.265,16.952)
C4: (71.429,35.221,14.313)
O5': (77.455,35.705,15.289)
C3': (75.928,37.860,12.580)
C1': (74.968,35.738,12.125)
O4': (76.026,35.534,13.044)
C5': (77.149,36.957,14.670)
P: (77.106,35.439,16.828)
O2: (72.406,36.319,11.159)
C4': (76.770,36.764,13.214)
C2': (75.209,37.103,11.467)
O2': (75.993,36.963,10.296)
N1: (73.716,35.576,12.900)
N3: (71.337,35.686,13.062)
N4: (70.302,35.036,14.999)
C6: (73.784,35.113,14.186)
C5: (72.682,34.922,14.918)
O3': (76.785,38.851,12.024)
OP1: (77.787,36.470,17.655)
OP2: (75.637,35.265,16.952)
C4: (71.429,35.221,14.313)
O5': (77.455,35.705,15.289)
C3': (75.928,37.860,12.580)
C1': (74.968,35.738,12.125)
O4': (76.026,35.534,13.044)
C5': (77.149,36.957,14.670)
P: (77.106,35.439,16.828)
O2: (72.406,36.319,11.159)
C4': (76.770,36.764,13.214)
C2': (75.209,37.103,11.467)
O2': (75.993,36.963,10.296)
N1: (73.716,35.576,12.900)
N3: (71.337,35.686,13.062)
N4: (70.302,35.036,14.999)
C6: (73.784,35.113,14.186)
C5: (72.682,34.922,14.918)
O3': (76.785,38.851,12.024)
Image (generated by PyMOL):