Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3L3C:P6:P5
Extra
PDB:
ATOM 1 O3' C A 5 12.133 -12.563 3.319 1.00113.54 O
ATOM 2 P A A 6 12.602 -14.024 3.783 1.00113.51 P
ATOM 3 OP1 A A 6 11.921 -15.010 2.912 1.00113.49 O
ATOM 4 OP2 A A 6 12.450 -14.129 5.252 1.00113.58 O
ATOM 5 O5' A A 6 14.162 -14.020 3.427 1.00113.25 O
ATOM 6 C5' A A 6 14.580 -13.956 2.068 1.00113.10 C
ATOM 7 C4' A A 6 15.996 -13.429 1.940 1.00113.10 C
ATOM 8 O4' A A 6 16.100 -12.089 2.485 1.00113.07 O
ATOM 9 C3' A A 6 17.062 -14.184 2.717 1.00113.13 C
ATOM 10 O3' A A 6 17.384 -15.420 2.098 1.00113.37 O
ATOM 11 C2' A A 6 18.198 -13.167 2.660 1.00113.07 C
ATOM 12 O2' A A 6 18.840 -13.092 1.400 1.00113.12 O
ATOM 13 C1' A A 6 17.426 -11.880 2.950 1.00113.01 C
ATOM 14 N9 A A 6 17.416 -11.563 4.380 1.00112.76 N
ATOM 15 C8 A A 6 16.351 -11.631 5.238 1.00112.62 C
ATOM 16 N7 A A 6 16.642 -11.299 6.473 1.00112.52 N
ATOM 17 C5 A A 6 17.992 -10.993 6.426 1.00112.53 C
ATOM 18 C6 A A 6 18.908 -10.567 7.413 1.00112.49 C
ATOM 19 N6 A A 6 18.566 -10.372 8.690 1.00112.55 N
ATOM 20 N1 A A 6 20.191 -10.351 7.038 1.00112.41 N
ATOM 21 C2 A A 6 20.532 -10.550 5.756 1.00112.43 C
ATOM 22 N3 A A 6 19.760 -10.946 4.742 1.00112.46 N
ATOM 23 C4 A A 6 18.489 -11.154 5.144 1.00112.58 C
ATOM 24 P U A 7 17.736 -16.696 3.000 1.00113.53 P
ATOM 25 OP1 U A 7 17.775 -17.878 2.111 1.00113.67 O
ATOM 26 OP2 U A 7 16.835 -16.708 4.175 1.00113.40 O
ATOM 27 O5' U A 7 19.229 -16.382 3.491 1.00113.89 O
TER
ATOM 1 O3' C B 4 9.301 -10.623 8.348 1.00112.64 O
ATOM 2 P C B 5 10.176 -11.905 7.941 1.00113.01 P
ATOM 3 OP1 C B 5 9.235 -12.979 7.548 1.00113.07 O
ATOM 4 OP2 C B 5 11.156 -12.166 9.019 1.00112.93 O
ATOM 5 O5' C B 5 10.970 -11.413 6.637 1.00113.06 O
ATOM 6 C5' C B 5 10.291 -11.093 5.420 1.00113.10 C
ATOM 7 C4' C B 5 11.249 -10.559 4.368 1.00113.28 C
ATOM 8 O4' C B 5 11.832 -9.296 4.778 1.00113.35 O
ATOM 9 C3' C B 5 12.475 -11.417 4.094 1.00113.42 C
ATOM 10 O3' C B 5 12.133 -12.563 3.319 1.00113.54 O
ATOM 11 C2' C B 5 13.370 -10.423 3.356 1.00113.39 C
ATOM 12 O2' C B 5 13.052 -10.263 1.985 1.00113.28 O
ATOM 13 C1' C B 5 13.083 -9.130 4.123 1.00113.38 C
ATOM 14 N1 C B 5 14.165 -8.772 5.116 1.00113.42 N
ATOM 15 C2 C B 5 15.380 -8.208 4.674 1.00113.45 C
ATOM 16 O2 C B 5 15.571 -7.997 3.468 1.00113.46 O
ATOM 17 N3 C B 5 16.334 -7.897 5.594 1.00113.48 N
ATOM 18 C4 C B 5 16.119 -8.125 6.895 1.00113.48 C
ATOM 19 N4 C B 5 17.089 -7.800 7.755 1.00113.37 N
ATOM 20 C5 C B 5 14.897 -8.699 7.366 1.00113.45 C
ATOM 21 C6 C B 5 13.963 -9.001 6.453 1.00113.44 C
ATOM 22 P A B 6 12.602 -14.024 3.783 1.00113.51 P
ATOM 23 OP1 A B 6 11.921 -15.010 2.912 1.00113.49 O
ATOM 24 OP2 A B 6 12.450 -14.129 5.252 1.00113.58 O
ATOM 25 O5' A B 6 14.162 -14.020 3.427 1.00113.25 O
TER
ATOM 2 P A A 6 12.602 -14.024 3.783 1.00113.51 P
ATOM 3 OP1 A A 6 11.921 -15.010 2.912 1.00113.49 O
ATOM 4 OP2 A A 6 12.450 -14.129 5.252 1.00113.58 O
ATOM 5 O5' A A 6 14.162 -14.020 3.427 1.00113.25 O
ATOM 6 C5' A A 6 14.580 -13.956 2.068 1.00113.10 C
ATOM 7 C4' A A 6 15.996 -13.429 1.940 1.00113.10 C
ATOM 8 O4' A A 6 16.100 -12.089 2.485 1.00113.07 O
ATOM 9 C3' A A 6 17.062 -14.184 2.717 1.00113.13 C
ATOM 10 O3' A A 6 17.384 -15.420 2.098 1.00113.37 O
ATOM 11 C2' A A 6 18.198 -13.167 2.660 1.00113.07 C
ATOM 12 O2' A A 6 18.840 -13.092 1.400 1.00113.12 O
ATOM 13 C1' A A 6 17.426 -11.880 2.950 1.00113.01 C
ATOM 14 N9 A A 6 17.416 -11.563 4.380 1.00112.76 N
ATOM 15 C8 A A 6 16.351 -11.631 5.238 1.00112.62 C
ATOM 16 N7 A A 6 16.642 -11.299 6.473 1.00112.52 N
ATOM 17 C5 A A 6 17.992 -10.993 6.426 1.00112.53 C
ATOM 18 C6 A A 6 18.908 -10.567 7.413 1.00112.49 C
ATOM 19 N6 A A 6 18.566 -10.372 8.690 1.00112.55 N
ATOM 20 N1 A A 6 20.191 -10.351 7.038 1.00112.41 N
ATOM 21 C2 A A 6 20.532 -10.550 5.756 1.00112.43 C
ATOM 22 N3 A A 6 19.760 -10.946 4.742 1.00112.46 N
ATOM 23 C4 A A 6 18.489 -11.154 5.144 1.00112.58 C
ATOM 24 P U A 7 17.736 -16.696 3.000 1.00113.53 P
ATOM 25 OP1 U A 7 17.775 -17.878 2.111 1.00113.67 O
ATOM 26 OP2 U A 7 16.835 -16.708 4.175 1.00113.40 O
ATOM 27 O5' U A 7 19.229 -16.382 3.491 1.00113.89 O
TER
ATOM 1 O3' C B 4 9.301 -10.623 8.348 1.00112.64 O
ATOM 2 P C B 5 10.176 -11.905 7.941 1.00113.01 P
ATOM 3 OP1 C B 5 9.235 -12.979 7.548 1.00113.07 O
ATOM 4 OP2 C B 5 11.156 -12.166 9.019 1.00112.93 O
ATOM 5 O5' C B 5 10.970 -11.413 6.637 1.00113.06 O
ATOM 6 C5' C B 5 10.291 -11.093 5.420 1.00113.10 C
ATOM 7 C4' C B 5 11.249 -10.559 4.368 1.00113.28 C
ATOM 8 O4' C B 5 11.832 -9.296 4.778 1.00113.35 O
ATOM 9 C3' C B 5 12.475 -11.417 4.094 1.00113.42 C
ATOM 10 O3' C B 5 12.133 -12.563 3.319 1.00113.54 O
ATOM 11 C2' C B 5 13.370 -10.423 3.356 1.00113.39 C
ATOM 12 O2' C B 5 13.052 -10.263 1.985 1.00113.28 O
ATOM 13 C1' C B 5 13.083 -9.130 4.123 1.00113.38 C
ATOM 14 N1 C B 5 14.165 -8.772 5.116 1.00113.42 N
ATOM 15 C2 C B 5 15.380 -8.208 4.674 1.00113.45 C
ATOM 16 O2 C B 5 15.571 -7.997 3.468 1.00113.46 O
ATOM 17 N3 C B 5 16.334 -7.897 5.594 1.00113.48 N
ATOM 18 C4 C B 5 16.119 -8.125 6.895 1.00113.48 C
ATOM 19 N4 C B 5 17.089 -7.800 7.755 1.00113.37 N
ATOM 20 C5 C B 5 14.897 -8.699 7.366 1.00113.45 C
ATOM 21 C6 C B 5 13.963 -9.001 6.453 1.00113.44 C
ATOM 22 P A B 6 12.602 -14.024 3.783 1.00113.51 P
ATOM 23 OP1 A B 6 11.921 -15.010 2.912 1.00113.49 O
ATOM 24 OP2 A B 6 12.450 -14.129 5.252 1.00113.58 O
ATOM 25 O5' A B 6 14.162 -14.020 3.427 1.00113.25 O
TER
Atoms:
OP1: (11.921,-15.010,2.912)
OP2: (12.450,-14.129,5.252)
C3': (17.062,-14.184,2.717)
C1': (17.426,-11.880,2.950)
C5': (14.580,-13.956,2.068)
O4': (16.100,-12.089,2.485)
C8: (16.351,-11.631,5.238)
O2': (18.840,-13.092,1.400)
C6: (18.908,-10.567,7.413)
C5: (17.992,-10.993,6.426)
C4: (18.489,-11.154,5.144)
P: (12.602,-14.024,3.783)
C4': (15.996,-13.429,1.940)
C2': (18.198,-13.167,2.660)
C2: (20.532,-10.550,5.756)
N1: (20.191,-10.351,7.038)
N3: (19.760,-10.946,4.742)
N6: (18.566,-10.372,8.690)
N7: (16.642,-11.299,6.473)
N9: (17.416,-11.563,4.380)
O5': (14.162,-14.020,3.427)
O3': (17.384,-15.420,2.098)
OP2: (12.450,-14.129,5.252)
C3': (17.062,-14.184,2.717)
C1': (17.426,-11.880,2.950)
C5': (14.580,-13.956,2.068)
O4': (16.100,-12.089,2.485)
C8: (16.351,-11.631,5.238)
O2': (18.840,-13.092,1.400)
C6: (18.908,-10.567,7.413)
C5: (17.992,-10.993,6.426)
C4: (18.489,-11.154,5.144)
P: (12.602,-14.024,3.783)
C4': (15.996,-13.429,1.940)
C2': (18.198,-13.167,2.660)
C2: (20.532,-10.550,5.756)
N1: (20.191,-10.351,7.038)
N3: (19.760,-10.946,4.742)
N6: (18.566,-10.372,8.690)
N7: (16.642,-11.299,6.473)
N9: (17.416,-11.563,4.380)
O5': (14.162,-14.020,3.427)
O3': (17.384,-15.420,2.098)
C2: (15.380,-8.208,4.674)
OP1: (9.235,-12.979,7.548)
OP2: (11.156,-12.166,9.019)
C4: (16.119,-8.125,6.895)
O5': (10.970,-11.413,6.637)
C3': (12.475,-11.417,4.094)
C1': (13.083,-9.130,4.123)
O4': (11.832,-9.296,4.778)
C5': (10.291,-11.093,5.420)
P: (10.176,-11.905,7.941)
O2: (15.571,-7.997,3.468)
C4': (11.249,-10.559,4.368)
C2': (13.370,-10.423,3.356)
O2': (13.052,-10.263,1.985)
N1: (14.165,-8.772,5.116)
N3: (16.334,-7.897,5.594)
N4: (17.089,-7.800,7.755)
C6: (13.963,-9.001,6.453)
C5: (14.897,-8.699,7.366)
O3': (12.133,-12.563,3.319)
OP1: (9.235,-12.979,7.548)
OP2: (11.156,-12.166,9.019)
C4: (16.119,-8.125,6.895)
O5': (10.970,-11.413,6.637)
C3': (12.475,-11.417,4.094)
C1': (13.083,-9.130,4.123)
O4': (11.832,-9.296,4.778)
C5': (10.291,-11.093,5.420)
P: (10.176,-11.905,7.941)
O2: (15.571,-7.997,3.468)
C4': (11.249,-10.559,4.368)
C2': (13.370,-10.423,3.356)
O2': (13.052,-10.263,1.985)
N1: (14.165,-8.772,5.116)
N3: (16.334,-7.897,5.594)
N4: (17.089,-7.800,7.755)
C6: (13.963,-9.001,6.453)
C5: (14.897,-8.699,7.366)
O3': (12.133,-12.563,3.319)
Image (generated by PyMOL):