Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:0539:0538
Extra
PDB:
ATOM 1 O3' C A 538 -2.306 133.487 77.680 1.00 55.90 O
ATOM 2 P A A 539 -2.051 131.901 77.646 1.00 55.87 P
ATOM 3 OP1 A A 539 -3.373 131.242 77.478 1.00 56.41 O
ATOM 4 OP2 A A 539 -1.211 131.556 78.819 1.00 54.02 O
ATOM 5 O5' A A 539 -1.194 131.665 76.319 1.00 51.06 O
ATOM 6 C5' A A 539 -1.724 131.968 75.014 1.00 47.22 C
ATOM 7 C4' A A 539 -0.624 131.888 73.978 1.00 47.88 C
ATOM 8 O4' A A 539 0.377 132.898 74.263 1.00 47.90 O
ATOM 9 C3' A A 539 0.139 130.574 73.968 1.00 47.98 C
ATOM 10 O3' A A 539 -0.514 129.633 73.127 1.00 45.91 O
ATOM 11 C2' A A 539 1.517 130.973 73.449 1.00 47.35 C
ATOM 12 O2' A A 539 1.575 131.100 72.047 1.00 44.49 O
ATOM 13 C1' A A 539 1.676 132.367 74.056 1.00 48.47 C
ATOM 14 N9 A A 539 2.394 132.429 75.331 1.00 50.01 N
ATOM 15 C8 A A 539 1.873 132.255 76.590 1.00 50.97 C
ATOM 16 N7 A A 539 2.740 132.443 77.550 1.00 51.08 N
ATOM 17 C5 A A 539 3.916 132.745 76.882 1.00 48.91 C
ATOM 18 C6 A A 539 5.199 133.053 77.340 1.00 48.03 C
ATOM 19 N6 A A 539 5.518 133.119 78.628 1.00 44.61 N
ATOM 20 N1 A A 539 6.157 133.295 76.419 1.00 48.88 N
ATOM 21 C2 A A 539 5.829 133.228 75.123 1.00 49.23 C
ATOM 22 N3 A A 539 4.653 132.951 74.570 1.00 50.31 N
ATOM 23 C4 A A 539 3.725 132.719 75.516 1.00 49.51 C
ATOM 24 P A A 540 -1.089 128.276 73.751 1.00 45.92 P
ATOM 25 OP1 A A 540 -2.214 127.859 72.866 1.00 48.01 O
ATOM 26 OP2 A A 540 -1.325 128.470 75.199 1.00 46.68 O
ATOM 27 O5' A A 540 0.102 127.240 73.584 1.00 46.02 O
TER
ATOM 1 O3' A B 537 0.066 136.026 82.894 1.00 59.60 O
ATOM 2 P C B 538 0.313 134.636 82.135 1.00 60.74 P
ATOM 3 OP1 C B 538 -0.600 133.635 82.742 1.00 63.36 O
ATOM 4 OP2 C B 538 1.775 134.372 82.113 1.00 61.64 O
ATOM 5 O5' C B 538 -0.147 134.911 80.632 1.00 61.76 O
ATOM 6 C5' C B 538 -1.511 135.249 80.298 1.00 59.27 C
ATOM 7 C4' C B 538 -1.630 135.518 78.812 1.00 58.54 C
ATOM 8 O4' C B 538 -0.727 136.596 78.456 1.00 60.61 O
ATOM 9 C3' C B 538 -1.219 134.372 77.903 1.00 58.19 C
ATOM 10 O3' C B 538 -2.306 133.487 77.680 1.00 55.90 O
ATOM 11 C2' C B 538 -0.812 135.079 76.618 1.00 59.13 C
ATOM 12 O2' C B 538 -1.907 135.407 75.796 1.00 60.37 O
ATOM 13 C1' C B 538 -0.195 136.370 77.159 1.00 61.16 C
ATOM 14 N1 C B 538 1.283 136.377 77.236 1.00 63.31 N
ATOM 15 C2 C B 538 2.017 136.800 76.114 1.00 63.78 C
ATOM 16 O2 C B 538 1.408 137.128 75.082 1.00 64.18 O
ATOM 17 N3 C B 538 3.369 136.840 76.185 1.00 64.30 N
ATOM 18 C4 C B 538 3.990 136.478 77.312 1.00 65.07 C
ATOM 19 N4 C B 538 5.325 136.553 77.344 1.00 65.81 N
ATOM 20 C5 C B 538 3.270 136.028 78.459 1.00 64.61 C
ATOM 21 C6 C B 538 1.934 135.992 78.378 1.00 63.88 C
ATOM 22 P A B 539 -2.051 131.901 77.646 1.00 55.87 P
ATOM 23 OP1 A B 539 -3.373 131.242 77.478 1.00 56.41 O
ATOM 24 OP2 A B 539 -1.211 131.556 78.819 1.00 54.02 O
ATOM 25 O5' A B 539 -1.194 131.665 76.319 1.00 51.06 O
TER
ATOM 2 P A A 539 -2.051 131.901 77.646 1.00 55.87 P
ATOM 3 OP1 A A 539 -3.373 131.242 77.478 1.00 56.41 O
ATOM 4 OP2 A A 539 -1.211 131.556 78.819 1.00 54.02 O
ATOM 5 O5' A A 539 -1.194 131.665 76.319 1.00 51.06 O
ATOM 6 C5' A A 539 -1.724 131.968 75.014 1.00 47.22 C
ATOM 7 C4' A A 539 -0.624 131.888 73.978 1.00 47.88 C
ATOM 8 O4' A A 539 0.377 132.898 74.263 1.00 47.90 O
ATOM 9 C3' A A 539 0.139 130.574 73.968 1.00 47.98 C
ATOM 10 O3' A A 539 -0.514 129.633 73.127 1.00 45.91 O
ATOM 11 C2' A A 539 1.517 130.973 73.449 1.00 47.35 C
ATOM 12 O2' A A 539 1.575 131.100 72.047 1.00 44.49 O
ATOM 13 C1' A A 539 1.676 132.367 74.056 1.00 48.47 C
ATOM 14 N9 A A 539 2.394 132.429 75.331 1.00 50.01 N
ATOM 15 C8 A A 539 1.873 132.255 76.590 1.00 50.97 C
ATOM 16 N7 A A 539 2.740 132.443 77.550 1.00 51.08 N
ATOM 17 C5 A A 539 3.916 132.745 76.882 1.00 48.91 C
ATOM 18 C6 A A 539 5.199 133.053 77.340 1.00 48.03 C
ATOM 19 N6 A A 539 5.518 133.119 78.628 1.00 44.61 N
ATOM 20 N1 A A 539 6.157 133.295 76.419 1.00 48.88 N
ATOM 21 C2 A A 539 5.829 133.228 75.123 1.00 49.23 C
ATOM 22 N3 A A 539 4.653 132.951 74.570 1.00 50.31 N
ATOM 23 C4 A A 539 3.725 132.719 75.516 1.00 49.51 C
ATOM 24 P A A 540 -1.089 128.276 73.751 1.00 45.92 P
ATOM 25 OP1 A A 540 -2.214 127.859 72.866 1.00 48.01 O
ATOM 26 OP2 A A 540 -1.325 128.470 75.199 1.00 46.68 O
ATOM 27 O5' A A 540 0.102 127.240 73.584 1.00 46.02 O
TER
ATOM 1 O3' A B 537 0.066 136.026 82.894 1.00 59.60 O
ATOM 2 P C B 538 0.313 134.636 82.135 1.00 60.74 P
ATOM 3 OP1 C B 538 -0.600 133.635 82.742 1.00 63.36 O
ATOM 4 OP2 C B 538 1.775 134.372 82.113 1.00 61.64 O
ATOM 5 O5' C B 538 -0.147 134.911 80.632 1.00 61.76 O
ATOM 6 C5' C B 538 -1.511 135.249 80.298 1.00 59.27 C
ATOM 7 C4' C B 538 -1.630 135.518 78.812 1.00 58.54 C
ATOM 8 O4' C B 538 -0.727 136.596 78.456 1.00 60.61 O
ATOM 9 C3' C B 538 -1.219 134.372 77.903 1.00 58.19 C
ATOM 10 O3' C B 538 -2.306 133.487 77.680 1.00 55.90 O
ATOM 11 C2' C B 538 -0.812 135.079 76.618 1.00 59.13 C
ATOM 12 O2' C B 538 -1.907 135.407 75.796 1.00 60.37 O
ATOM 13 C1' C B 538 -0.195 136.370 77.159 1.00 61.16 C
ATOM 14 N1 C B 538 1.283 136.377 77.236 1.00 63.31 N
ATOM 15 C2 C B 538 2.017 136.800 76.114 1.00 63.78 C
ATOM 16 O2 C B 538 1.408 137.128 75.082 1.00 64.18 O
ATOM 17 N3 C B 538 3.369 136.840 76.185 1.00 64.30 N
ATOM 18 C4 C B 538 3.990 136.478 77.312 1.00 65.07 C
ATOM 19 N4 C B 538 5.325 136.553 77.344 1.00 65.81 N
ATOM 20 C5 C B 538 3.270 136.028 78.459 1.00 64.61 C
ATOM 21 C6 C B 538 1.934 135.992 78.378 1.00 63.88 C
ATOM 22 P A B 539 -2.051 131.901 77.646 1.00 55.87 P
ATOM 23 OP1 A B 539 -3.373 131.242 77.478 1.00 56.41 O
ATOM 24 OP2 A B 539 -1.211 131.556 78.819 1.00 54.02 O
ATOM 25 O5' A B 539 -1.194 131.665 76.319 1.00 51.06 O
TER
Atoms:
OP1: (-3.373,131.242,77.478)
OP2: (-1.211,131.556,78.819)
C3': (0.139,130.574,73.968)
C1': (1.676,132.367,74.056)
C5': (-1.724,131.968,75.014)
O4': (0.377,132.898,74.263)
C8: (1.873,132.255,76.590)
O2': (1.575,131.100,72.047)
C6: (5.199,133.053,77.340)
C5: (3.916,132.745,76.882)
C4: (3.725,132.719,75.516)
P: (-2.051,131.901,77.646)
C4': (-0.624,131.888,73.978)
C2': (1.517,130.973,73.449)
C2: (5.829,133.228,75.123)
N1: (6.157,133.295,76.419)
N3: (4.653,132.951,74.570)
N6: (5.518,133.119,78.628)
N7: (2.740,132.443,77.550)
N9: (2.394,132.429,75.331)
O5': (-1.194,131.665,76.319)
O3': (-0.514,129.633,73.127)
OP2: (-1.211,131.556,78.819)
C3': (0.139,130.574,73.968)
C1': (1.676,132.367,74.056)
C5': (-1.724,131.968,75.014)
O4': (0.377,132.898,74.263)
C8: (1.873,132.255,76.590)
O2': (1.575,131.100,72.047)
C6: (5.199,133.053,77.340)
C5: (3.916,132.745,76.882)
C4: (3.725,132.719,75.516)
P: (-2.051,131.901,77.646)
C4': (-0.624,131.888,73.978)
C2': (1.517,130.973,73.449)
C2: (5.829,133.228,75.123)
N1: (6.157,133.295,76.419)
N3: (4.653,132.951,74.570)
N6: (5.518,133.119,78.628)
N7: (2.740,132.443,77.550)
N9: (2.394,132.429,75.331)
O5': (-1.194,131.665,76.319)
O3': (-0.514,129.633,73.127)
C2: (2.017,136.800,76.114)
OP1: (-0.600,133.635,82.742)
OP2: (1.775,134.372,82.113)
C4: (3.990,136.478,77.312)
O5': (-0.147,134.911,80.632)
C3': (-1.219,134.372,77.903)
C1': (-0.195,136.370,77.159)
O4': (-0.727,136.596,78.456)
C5': (-1.511,135.249,80.298)
P: (0.313,134.636,82.135)
O2: (1.408,137.128,75.082)
C4': (-1.630,135.518,78.812)
C2': (-0.812,135.079,76.618)
O2': (-1.907,135.407,75.796)
N1: (1.283,136.377,77.236)
N3: (3.369,136.840,76.185)
N4: (5.325,136.553,77.344)
C6: (1.934,135.992,78.378)
C5: (3.270,136.028,78.459)
O3': (-2.306,133.487,77.680)
OP1: (-0.600,133.635,82.742)
OP2: (1.775,134.372,82.113)
C4: (3.990,136.478,77.312)
O5': (-0.147,134.911,80.632)
C3': (-1.219,134.372,77.903)
C1': (-0.195,136.370,77.159)
O4': (-0.727,136.596,78.456)
C5': (-1.511,135.249,80.298)
P: (0.313,134.636,82.135)
O2: (1.408,137.128,75.082)
C4': (-1.630,135.518,78.812)
C2': (-0.812,135.079,76.618)
O2': (-1.907,135.407,75.796)
N1: (1.283,136.377,77.236)
N3: (3.369,136.840,76.185)
N4: (5.325,136.553,77.344)
C6: (1.934,135.992,78.378)
C5: (3.270,136.028,78.459)
O3': (-2.306,133.487,77.680)
Image (generated by PyMOL):