Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A1397:A1399
Extra
PDB:
ATOM 1 O3' A A1396 -104.057 31.720 -11.723 1.00 15.34 O
ATOM 2 P C A1397 -104.181 32.561 -10.370 1.00 9.11 P
ATOM 3 OP1 C A1397 -105.351 33.464 -10.526 1.00 9.11 O
ATOM 4 OP2 C A1397 -102.844 33.158 -10.112 1.00 9.11 O
ATOM 5 O5' C A1397 -104.493 31.448 -9.269 1.00 9.11 O
ATOM 6 C5' C A1397 -104.457 30.059 -9.574 1.00 9.11 C
ATOM 7 C4' C A1397 -103.875 29.260 -8.435 1.00 9.11 C
ATOM 8 O4' C A1397 -102.449 29.089 -8.655 1.00 9.11 O
ATOM 9 C3' C A1397 -104.018 29.896 -7.056 1.00 9.11 C
ATOM 10 O3' C A1397 -104.302 28.902 -6.091 1.00 9.11 O
ATOM 11 C2' C A1397 -102.638 30.475 -6.786 1.00 9.11 C
ATOM 12 O2' C A1397 -102.312 30.585 -5.425 1.00 9.11 O
ATOM 13 C1' C A1397 -101.738 29.481 -7.497 1.00 9.11 C
ATOM 14 N1 C A1397 -100.440 30.053 -7.911 1.00 9.28 N
ATOM 15 C2 C A1397 -99.206 29.420 -7.728 1.00 9.28 C
ATOM 16 O2 C A1397 -99.163 28.326 -7.203 1.00 9.28 O
ATOM 17 N3 C A1397 -98.064 30.015 -8.113 1.00 9.28 N
ATOM 18 C4 C A1397 -98.121 31.234 -8.669 1.00 9.28 C
ATOM 19 N4 C A1397 -97.012 31.871 -9.065 1.00 9.28 N
ATOM 20 C5 C A1397 -99.355 31.903 -8.868 1.00 9.28 C
ATOM 21 C6 C A1397 -100.474 31.285 -8.475 1.00 9.28 C
ATOM 22 P C A1398 -105.810 28.412 -5.873 1.00 14.34 P
ATOM 23 OP1 C A1398 -106.691 29.594 -6.038 1.00 14.34 O
ATOM 24 OP2 C A1398 -105.850 27.650 -4.589 1.00 14.34 O
ATOM 25 O5' C A1398 -106.012 27.424 -7.084 1.00 14.34 O
TER
ATOM 1 O3' C B1398 -105.767 24.804 -10.497 1.00 14.34 O
ATOM 2 P G B1399 -104.312 24.240 -10.812 1.00 7.96 P
ATOM 3 OP1 G B1399 -104.424 23.319 -11.969 1.00 7.96 O
ATOM 4 OP2 G B1399 -103.772 23.729 -9.547 1.00 7.96 O
ATOM 5 O5' G B1399 -103.530 25.534 -11.250 1.00 7.96 O
ATOM 6 C5' G B1399 -103.854 26.177 -12.465 1.00 7.96 C
ATOM 7 C4' G B1399 -102.792 27.154 -12.864 1.00 7.96 C
ATOM 8 O4' G B1399 -102.492 28.031 -11.739 1.00 7.96 O
ATOM 9 C3' G B1399 -101.444 26.554 -13.246 1.00 7.96 C
ATOM 10 O3' G B1399 -101.411 26.071 -14.581 1.00 7.96 O
ATOM 11 C2' G B1399 -100.523 27.720 -12.995 1.00 7.96 C
ATOM 12 O2' G B1399 -100.690 28.703 -14.001 1.00 7.96 O
ATOM 13 C1' G B1399 -101.107 28.251 -11.674 1.00 7.96 C
ATOM 14 N9 G B1399 -100.590 27.477 -10.536 1.00 7.88 N
ATOM 15 C8 G B1399 -101.251 26.525 -9.795 1.00 7.88 C
ATOM 16 N7 G B1399 -100.479 25.932 -8.919 1.00 7.88 N
ATOM 17 C5 G B1399 -99.226 26.512 -9.133 1.00 7.88 C
ATOM 18 C6 G B1399 -97.973 26.282 -8.505 1.00 7.88 C
ATOM 19 O6 G B1399 -97.664 25.504 -7.590 1.00 7.88 O
ATOM 20 N1 G B1399 -97.012 27.109 -9.062 1.00 7.88 N
ATOM 21 C2 G B1399 -97.207 28.010 -10.078 1.00 7.88 C
ATOM 22 N2 G B1399 -96.140 28.708 -10.481 1.00 7.88 N
ATOM 23 N3 G B1399 -98.344 28.226 -10.662 1.00 7.88 N
ATOM 24 C4 G B1399 -99.291 27.459 -10.131 1.00 7.88 C
ATOM 25 P C B1400 -100.736 24.642 -14.925 1.00 1.43 P
ATOM 26 OP1 C B1400 -100.752 24.496 -16.396 1.00 1.43 O
ATOM 27 OP2 C B1400 -101.423 23.604 -14.106 1.00 1.43 O
ATOM 28 O5' C B1400 -99.248 24.853 -14.428 1.00 1.43 O
TER
ATOM 2 P C A1397 -104.181 32.561 -10.370 1.00 9.11 P
ATOM 3 OP1 C A1397 -105.351 33.464 -10.526 1.00 9.11 O
ATOM 4 OP2 C A1397 -102.844 33.158 -10.112 1.00 9.11 O
ATOM 5 O5' C A1397 -104.493 31.448 -9.269 1.00 9.11 O
ATOM 6 C5' C A1397 -104.457 30.059 -9.574 1.00 9.11 C
ATOM 7 C4' C A1397 -103.875 29.260 -8.435 1.00 9.11 C
ATOM 8 O4' C A1397 -102.449 29.089 -8.655 1.00 9.11 O
ATOM 9 C3' C A1397 -104.018 29.896 -7.056 1.00 9.11 C
ATOM 10 O3' C A1397 -104.302 28.902 -6.091 1.00 9.11 O
ATOM 11 C2' C A1397 -102.638 30.475 -6.786 1.00 9.11 C
ATOM 12 O2' C A1397 -102.312 30.585 -5.425 1.00 9.11 O
ATOM 13 C1' C A1397 -101.738 29.481 -7.497 1.00 9.11 C
ATOM 14 N1 C A1397 -100.440 30.053 -7.911 1.00 9.28 N
ATOM 15 C2 C A1397 -99.206 29.420 -7.728 1.00 9.28 C
ATOM 16 O2 C A1397 -99.163 28.326 -7.203 1.00 9.28 O
ATOM 17 N3 C A1397 -98.064 30.015 -8.113 1.00 9.28 N
ATOM 18 C4 C A1397 -98.121 31.234 -8.669 1.00 9.28 C
ATOM 19 N4 C A1397 -97.012 31.871 -9.065 1.00 9.28 N
ATOM 20 C5 C A1397 -99.355 31.903 -8.868 1.00 9.28 C
ATOM 21 C6 C A1397 -100.474 31.285 -8.475 1.00 9.28 C
ATOM 22 P C A1398 -105.810 28.412 -5.873 1.00 14.34 P
ATOM 23 OP1 C A1398 -106.691 29.594 -6.038 1.00 14.34 O
ATOM 24 OP2 C A1398 -105.850 27.650 -4.589 1.00 14.34 O
ATOM 25 O5' C A1398 -106.012 27.424 -7.084 1.00 14.34 O
TER
ATOM 1 O3' C B1398 -105.767 24.804 -10.497 1.00 14.34 O
ATOM 2 P G B1399 -104.312 24.240 -10.812 1.00 7.96 P
ATOM 3 OP1 G B1399 -104.424 23.319 -11.969 1.00 7.96 O
ATOM 4 OP2 G B1399 -103.772 23.729 -9.547 1.00 7.96 O
ATOM 5 O5' G B1399 -103.530 25.534 -11.250 1.00 7.96 O
ATOM 6 C5' G B1399 -103.854 26.177 -12.465 1.00 7.96 C
ATOM 7 C4' G B1399 -102.792 27.154 -12.864 1.00 7.96 C
ATOM 8 O4' G B1399 -102.492 28.031 -11.739 1.00 7.96 O
ATOM 9 C3' G B1399 -101.444 26.554 -13.246 1.00 7.96 C
ATOM 10 O3' G B1399 -101.411 26.071 -14.581 1.00 7.96 O
ATOM 11 C2' G B1399 -100.523 27.720 -12.995 1.00 7.96 C
ATOM 12 O2' G B1399 -100.690 28.703 -14.001 1.00 7.96 O
ATOM 13 C1' G B1399 -101.107 28.251 -11.674 1.00 7.96 C
ATOM 14 N9 G B1399 -100.590 27.477 -10.536 1.00 7.88 N
ATOM 15 C8 G B1399 -101.251 26.525 -9.795 1.00 7.88 C
ATOM 16 N7 G B1399 -100.479 25.932 -8.919 1.00 7.88 N
ATOM 17 C5 G B1399 -99.226 26.512 -9.133 1.00 7.88 C
ATOM 18 C6 G B1399 -97.973 26.282 -8.505 1.00 7.88 C
ATOM 19 O6 G B1399 -97.664 25.504 -7.590 1.00 7.88 O
ATOM 20 N1 G B1399 -97.012 27.109 -9.062 1.00 7.88 N
ATOM 21 C2 G B1399 -97.207 28.010 -10.078 1.00 7.88 C
ATOM 22 N2 G B1399 -96.140 28.708 -10.481 1.00 7.88 N
ATOM 23 N3 G B1399 -98.344 28.226 -10.662 1.00 7.88 N
ATOM 24 C4 G B1399 -99.291 27.459 -10.131 1.00 7.88 C
ATOM 25 P C B1400 -100.736 24.642 -14.925 1.00 1.43 P
ATOM 26 OP1 C B1400 -100.752 24.496 -16.396 1.00 1.43 O
ATOM 27 OP2 C B1400 -101.423 23.604 -14.106 1.00 1.43 O
ATOM 28 O5' C B1400 -99.248 24.853 -14.428 1.00 1.43 O
TER
Atoms:
C2: (-99.206,29.420,-7.728)
OP1: (-105.351,33.464,-10.526)
OP2: (-102.844,33.158,-10.112)
C4: (-98.121,31.234,-8.669)
O5': (-104.493,31.448,-9.269)
C3': (-104.018,29.896,-7.056)
C1': (-101.738,29.481,-7.497)
O4': (-102.449,29.089,-8.655)
C5': (-104.457,30.059,-9.574)
P: (-104.181,32.561,-10.370)
O2: (-99.163,28.326,-7.203)
C4': (-103.875,29.260,-8.435)
C2': (-102.638,30.475,-6.786)
O2': (-102.312,30.585,-5.425)
N1: (-100.440,30.053,-7.911)
N3: (-98.064,30.015,-8.113)
N4: (-97.012,31.871,-9.065)
C6: (-100.474,31.285,-8.475)
C5: (-99.355,31.903,-8.868)
O3': (-104.302,28.902,-6.091)
OP1: (-105.351,33.464,-10.526)
OP2: (-102.844,33.158,-10.112)
C4: (-98.121,31.234,-8.669)
O5': (-104.493,31.448,-9.269)
C3': (-104.018,29.896,-7.056)
C1': (-101.738,29.481,-7.497)
O4': (-102.449,29.089,-8.655)
C5': (-104.457,30.059,-9.574)
P: (-104.181,32.561,-10.370)
O2: (-99.163,28.326,-7.203)
C4': (-103.875,29.260,-8.435)
C2': (-102.638,30.475,-6.786)
O2': (-102.312,30.585,-5.425)
N1: (-100.440,30.053,-7.911)
N3: (-98.064,30.015,-8.113)
N4: (-97.012,31.871,-9.065)
C6: (-100.474,31.285,-8.475)
C5: (-99.355,31.903,-8.868)
O3': (-104.302,28.902,-6.091)
OP1: (-104.424,23.319,-11.969)
OP2: (-103.772,23.729,-9.547)
C3': (-101.444,26.554,-13.246)
C1': (-101.107,28.251,-11.674)
C5': (-103.854,26.177,-12.465)
O6: (-97.664,25.504,-7.590)
O4': (-102.492,28.031,-11.739)
C8: (-101.251,26.525,-9.795)
C2: (-97.207,28.010,-10.078)
C6: (-97.973,26.282,-8.505)
C5: (-99.226,26.512,-9.133)
C4: (-99.291,27.459,-10.131)
P: (-104.312,24.240,-10.812)
C4': (-102.792,27.154,-12.864)
C2': (-100.523,27.720,-12.995)
O2': (-100.690,28.703,-14.001)
N1: (-97.012,27.109,-9.062)
N2: (-96.140,28.708,-10.481)
N3: (-98.344,28.226,-10.662)
N7: (-100.479,25.932,-8.919)
N9: (-100.590,27.477,-10.536)
O5': (-103.530,25.534,-11.250)
O3': (-101.411,26.071,-14.581)
OP2: (-103.772,23.729,-9.547)
C3': (-101.444,26.554,-13.246)
C1': (-101.107,28.251,-11.674)
C5': (-103.854,26.177,-12.465)
O6: (-97.664,25.504,-7.590)
O4': (-102.492,28.031,-11.739)
C8: (-101.251,26.525,-9.795)
C2: (-97.207,28.010,-10.078)
C6: (-97.973,26.282,-8.505)
C5: (-99.226,26.512,-9.133)
C4: (-99.291,27.459,-10.131)
P: (-104.312,24.240,-10.812)
C4': (-102.792,27.154,-12.864)
C2': (-100.523,27.720,-12.995)
O2': (-100.690,28.703,-14.001)
N1: (-97.012,27.109,-9.062)
N2: (-96.140,28.708,-10.481)
N3: (-98.344,28.226,-10.662)
N7: (-100.479,25.932,-8.919)
N9: (-100.590,27.477,-10.536)
O5': (-103.530,25.534,-11.250)
O3': (-101.411,26.071,-14.581)
Image (generated by PyMOL):