Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:B6:B5
Extra
PDB:
ATOM 1 O3' C A 5 -34.408 48.379 -10.903 1.00 65.79 O
ATOM 2 P A A 6 -33.855 46.902 -10.644 1.00 67.95 P
ATOM 3 OP1 A A 6 -34.995 45.959 -10.657 1.00 59.35 O
ATOM 4 OP2 A A 6 -32.949 46.949 -9.474 1.00 66.34 O
ATOM 5 O5' A A 6 -32.989 46.668 -11.965 1.00 64.61 O
ATOM 6 C5' A A 6 -33.462 47.190 -13.200 1.00 63.31 C
ATOM 7 C4' A A 6 -32.294 47.488 -14.117 1.00 59.26 C
ATOM 8 O4' A A 6 -31.648 48.727 -13.731 1.00 58.87 O
ATOM 9 C3' A A 6 -31.182 46.458 -14.048 1.00 58.79 C
ATOM 10 O3' A A 6 -31.515 45.333 -14.847 1.00 60.88 O
ATOM 11 C2' A A 6 -30.013 47.260 -14.610 1.00 55.70 C
ATOM 12 O2' A A 6 -30.051 47.367 -16.019 1.00 56.04 O
ATOM 13 C1' A A 6 -30.255 48.623 -13.966 1.00 54.34 C
ATOM 14 N9 A A 6 -29.555 48.769 -12.695 1.00 50.28 N
ATOM 15 C8 A A 6 -30.067 48.568 -11.444 1.00 55.14 C
ATOM 16 N7 A A 6 -29.200 48.770 -10.479 1.00 52.22 N
ATOM 17 C5 A A 6 -28.039 49.126 -11.145 1.00 50.30 C
ATOM 18 C6 A A 6 -26.751 49.468 -10.689 1.00 50.09 C
ATOM 19 N6 A A 6 -26.415 49.506 -9.395 1.00 49.55 N
ATOM 20 N1 A A 6 -25.820 49.770 -11.620 1.00 49.23 N
ATOM 21 C2 A A 6 -26.162 49.731 -12.913 1.00 49.01 C
ATOM 22 N3 A A 6 -27.337 49.425 -13.460 1.00 49.47 N
ATOM 23 C4 A A 6 -28.240 49.129 -12.512 1.00 49.35 C
ATOM 24 P G A 7 -30.681 43.982 -14.672 1.00 64.89 P
ATOM 25 OP1 G A 7 -31.254 42.959 -15.578 1.00 64.28 O
ATOM 26 OP2 G A 7 -30.535 43.697 -13.226 1.00 56.66 O
ATOM 27 O5' G A 7 -29.267 44.431 -15.261 1.00 57.98 O
TER
ATOM 1 O3' C B 4 -34.550 52.140 -5.216 1.00 70.42 O
ATOM 2 P C B 5 -34.392 50.613 -5.660 1.00 74.84 P
ATOM 3 OP1 C B 5 -35.461 49.818 -5.014 1.00 70.71 O
ATOM 4 OP2 C B 5 -32.975 50.224 -5.489 1.00 65.91 O
ATOM 5 O5' C B 5 -34.725 50.716 -7.218 1.00 66.68 O
ATOM 6 C5' C B 5 -34.015 49.910 -8.131 1.00 66.78 C
ATOM 7 C4' C B 5 -34.298 50.341 -9.555 1.00 63.58 C
ATOM 8 O4' C B 5 -33.823 51.693 -9.779 1.00 64.72 O
ATOM 9 C3' C B 5 -33.580 49.485 -10.579 1.00 63.98 C
ATOM 10 O3' C B 5 -34.408 48.379 -10.903 1.00 65.79 O
ATOM 11 C2' C B 5 -33.396 50.454 -11.741 1.00 64.09 C
ATOM 12 O2' C B 5 -34.561 50.584 -12.532 1.00 68.54 O
ATOM 13 C1' C B 5 -33.104 51.754 -10.996 1.00 61.44 C
ATOM 14 N1 C B 5 -31.663 51.942 -10.665 1.00 59.14 N
ATOM 15 C2 C B 5 -30.747 52.256 -11.675 1.00 59.90 C
ATOM 16 O2 C B 5 -31.146 52.372 -12.840 1.00 64.94 O
ATOM 17 N3 C B 5 -29.442 52.421 -11.345 1.00 58.59 N
ATOM 18 C4 C B 5 -29.048 52.286 -10.076 1.00 57.80 C
ATOM 19 N4 C B 5 -27.752 52.459 -9.800 1.00 58.09 N
ATOM 20 C5 C B 5 -29.967 51.968 -9.034 1.00 57.92 C
ATOM 21 C6 C B 5 -31.250 51.807 -9.371 1.00 63.03 C
ATOM 22 P A B 6 -33.855 46.902 -10.644 1.00 67.95 P
ATOM 23 OP1 A B 6 -34.995 45.959 -10.657 1.00 59.35 O
ATOM 24 OP2 A B 6 -32.949 46.949 -9.474 1.00 66.34 O
ATOM 25 O5' A B 6 -32.989 46.668 -11.965 1.00 64.61 O
TER
ATOM 2 P A A 6 -33.855 46.902 -10.644 1.00 67.95 P
ATOM 3 OP1 A A 6 -34.995 45.959 -10.657 1.00 59.35 O
ATOM 4 OP2 A A 6 -32.949 46.949 -9.474 1.00 66.34 O
ATOM 5 O5' A A 6 -32.989 46.668 -11.965 1.00 64.61 O
ATOM 6 C5' A A 6 -33.462 47.190 -13.200 1.00 63.31 C
ATOM 7 C4' A A 6 -32.294 47.488 -14.117 1.00 59.26 C
ATOM 8 O4' A A 6 -31.648 48.727 -13.731 1.00 58.87 O
ATOM 9 C3' A A 6 -31.182 46.458 -14.048 1.00 58.79 C
ATOM 10 O3' A A 6 -31.515 45.333 -14.847 1.00 60.88 O
ATOM 11 C2' A A 6 -30.013 47.260 -14.610 1.00 55.70 C
ATOM 12 O2' A A 6 -30.051 47.367 -16.019 1.00 56.04 O
ATOM 13 C1' A A 6 -30.255 48.623 -13.966 1.00 54.34 C
ATOM 14 N9 A A 6 -29.555 48.769 -12.695 1.00 50.28 N
ATOM 15 C8 A A 6 -30.067 48.568 -11.444 1.00 55.14 C
ATOM 16 N7 A A 6 -29.200 48.770 -10.479 1.00 52.22 N
ATOM 17 C5 A A 6 -28.039 49.126 -11.145 1.00 50.30 C
ATOM 18 C6 A A 6 -26.751 49.468 -10.689 1.00 50.09 C
ATOM 19 N6 A A 6 -26.415 49.506 -9.395 1.00 49.55 N
ATOM 20 N1 A A 6 -25.820 49.770 -11.620 1.00 49.23 N
ATOM 21 C2 A A 6 -26.162 49.731 -12.913 1.00 49.01 C
ATOM 22 N3 A A 6 -27.337 49.425 -13.460 1.00 49.47 N
ATOM 23 C4 A A 6 -28.240 49.129 -12.512 1.00 49.35 C
ATOM 24 P G A 7 -30.681 43.982 -14.672 1.00 64.89 P
ATOM 25 OP1 G A 7 -31.254 42.959 -15.578 1.00 64.28 O
ATOM 26 OP2 G A 7 -30.535 43.697 -13.226 1.00 56.66 O
ATOM 27 O5' G A 7 -29.267 44.431 -15.261 1.00 57.98 O
TER
ATOM 1 O3' C B 4 -34.550 52.140 -5.216 1.00 70.42 O
ATOM 2 P C B 5 -34.392 50.613 -5.660 1.00 74.84 P
ATOM 3 OP1 C B 5 -35.461 49.818 -5.014 1.00 70.71 O
ATOM 4 OP2 C B 5 -32.975 50.224 -5.489 1.00 65.91 O
ATOM 5 O5' C B 5 -34.725 50.716 -7.218 1.00 66.68 O
ATOM 6 C5' C B 5 -34.015 49.910 -8.131 1.00 66.78 C
ATOM 7 C4' C B 5 -34.298 50.341 -9.555 1.00 63.58 C
ATOM 8 O4' C B 5 -33.823 51.693 -9.779 1.00 64.72 O
ATOM 9 C3' C B 5 -33.580 49.485 -10.579 1.00 63.98 C
ATOM 10 O3' C B 5 -34.408 48.379 -10.903 1.00 65.79 O
ATOM 11 C2' C B 5 -33.396 50.454 -11.741 1.00 64.09 C
ATOM 12 O2' C B 5 -34.561 50.584 -12.532 1.00 68.54 O
ATOM 13 C1' C B 5 -33.104 51.754 -10.996 1.00 61.44 C
ATOM 14 N1 C B 5 -31.663 51.942 -10.665 1.00 59.14 N
ATOM 15 C2 C B 5 -30.747 52.256 -11.675 1.00 59.90 C
ATOM 16 O2 C B 5 -31.146 52.372 -12.840 1.00 64.94 O
ATOM 17 N3 C B 5 -29.442 52.421 -11.345 1.00 58.59 N
ATOM 18 C4 C B 5 -29.048 52.286 -10.076 1.00 57.80 C
ATOM 19 N4 C B 5 -27.752 52.459 -9.800 1.00 58.09 N
ATOM 20 C5 C B 5 -29.967 51.968 -9.034 1.00 57.92 C
ATOM 21 C6 C B 5 -31.250 51.807 -9.371 1.00 63.03 C
ATOM 22 P A B 6 -33.855 46.902 -10.644 1.00 67.95 P
ATOM 23 OP1 A B 6 -34.995 45.959 -10.657 1.00 59.35 O
ATOM 24 OP2 A B 6 -32.949 46.949 -9.474 1.00 66.34 O
ATOM 25 O5' A B 6 -32.989 46.668 -11.965 1.00 64.61 O
TER
Atoms:
OP1: (-34.995,45.959,-10.657)
OP2: (-32.949,46.949,-9.474)
C3': (-31.182,46.458,-14.048)
C1': (-30.255,48.623,-13.966)
C5': (-33.462,47.190,-13.200)
O4': (-31.648,48.727,-13.731)
C8: (-30.067,48.568,-11.444)
O2': (-30.051,47.367,-16.019)
C6: (-26.751,49.468,-10.689)
C5: (-28.039,49.126,-11.145)
C4: (-28.240,49.129,-12.512)
P: (-33.855,46.902,-10.644)
C4': (-32.294,47.488,-14.117)
C2': (-30.013,47.260,-14.610)
C2: (-26.162,49.731,-12.913)
N1: (-25.820,49.770,-11.620)
N3: (-27.337,49.425,-13.460)
N6: (-26.415,49.506,-9.395)
N7: (-29.200,48.770,-10.479)
N9: (-29.555,48.769,-12.695)
O5': (-32.989,46.668,-11.965)
O3': (-31.515,45.333,-14.847)
OP2: (-32.949,46.949,-9.474)
C3': (-31.182,46.458,-14.048)
C1': (-30.255,48.623,-13.966)
C5': (-33.462,47.190,-13.200)
O4': (-31.648,48.727,-13.731)
C8: (-30.067,48.568,-11.444)
O2': (-30.051,47.367,-16.019)
C6: (-26.751,49.468,-10.689)
C5: (-28.039,49.126,-11.145)
C4: (-28.240,49.129,-12.512)
P: (-33.855,46.902,-10.644)
C4': (-32.294,47.488,-14.117)
C2': (-30.013,47.260,-14.610)
C2: (-26.162,49.731,-12.913)
N1: (-25.820,49.770,-11.620)
N3: (-27.337,49.425,-13.460)
N6: (-26.415,49.506,-9.395)
N7: (-29.200,48.770,-10.479)
N9: (-29.555,48.769,-12.695)
O5': (-32.989,46.668,-11.965)
O3': (-31.515,45.333,-14.847)
C2: (-30.747,52.256,-11.675)
OP1: (-35.461,49.818,-5.014)
OP2: (-32.975,50.224,-5.489)
C4: (-29.048,52.286,-10.076)
O5': (-34.725,50.716,-7.218)
C3': (-33.580,49.485,-10.579)
C1': (-33.104,51.754,-10.996)
O4': (-33.823,51.693,-9.779)
C5': (-34.015,49.910,-8.131)
P: (-34.392,50.613,-5.660)
O2: (-31.146,52.372,-12.840)
C4': (-34.298,50.341,-9.555)
C2': (-33.396,50.454,-11.741)
O2': (-34.561,50.584,-12.532)
N1: (-31.663,51.942,-10.665)
N3: (-29.442,52.421,-11.345)
N4: (-27.752,52.459,-9.800)
C6: (-31.250,51.807,-9.371)
C5: (-29.967,51.968,-9.034)
O3': (-34.408,48.379,-10.903)
OP1: (-35.461,49.818,-5.014)
OP2: (-32.975,50.224,-5.489)
C4: (-29.048,52.286,-10.076)
O5': (-34.725,50.716,-7.218)
C3': (-33.580,49.485,-10.579)
C1': (-33.104,51.754,-10.996)
O4': (-33.823,51.693,-9.779)
C5': (-34.015,49.910,-8.131)
P: (-34.392,50.613,-5.660)
O2: (-31.146,52.372,-12.840)
C4': (-34.298,50.341,-9.555)
C2': (-33.396,50.454,-11.741)
O2': (-34.561,50.584,-12.532)
N1: (-31.663,51.942,-10.665)
N3: (-29.442,52.421,-11.345)
N4: (-27.752,52.459,-9.800)
C6: (-31.250,51.807,-9.371)
C5: (-29.967,51.968,-9.034)
O3': (-34.408,48.379,-10.903)
Image (generated by PyMOL):