Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:A88:A87
Extra
PDB:
ATOM 1 O3' C A 87 6.412 25.115 7.313 1.00 24.60 O
ATOM 2 P A A 88 6.342 26.713 7.288 1.00 26.26 P
ATOM 3 OP1 A A 88 7.771 27.133 7.155 1.00 26.56 O
ATOM 4 OP2 A A 88 5.506 27.193 8.409 1.00 19.52 O
ATOM 5 O5' A A 88 5.531 27.008 5.963 1.00 27.75 O
ATOM 6 C5' A A 88 6.114 26.765 4.696 1.00 28.65 C
ATOM 7 C4' A A 88 5.028 26.742 3.662 1.00 26.63 C
ATOM 8 O4' A A 88 3.913 25.965 4.174 1.00 28.53 O
ATOM 9 C3' A A 88 4.403 28.087 3.343 1.00 24.84 C
ATOM 10 O3' A A 88 5.171 28.859 2.437 1.00 23.93 O
ATOM 11 C2' A A 88 3.058 27.679 2.771 1.00 29.00 C
ATOM 12 O2' A A 88 3.213 27.235 1.434 1.00 30.46 O
ATOM 13 C1' A A 88 2.711 26.478 3.649 1.00 27.28 C
ATOM 14 N9 A A 88 1.826 26.892 4.745 1.00 27.52 N
ATOM 15 C8 A A 88 2.105 27.151 6.061 1.00 27.10 C
ATOM 16 N7 A A 88 1.047 27.530 6.744 1.00 24.95 N
ATOM 17 C5 A A 88 0.015 27.522 5.818 1.00 27.92 C
ATOM 18 C6 A A 88 -1.364 27.815 5.900 1.00 29.17 C
ATOM 19 N6 A A 88 -1.996 28.200 7.017 1.00 29.99 N
ATOM 20 N1 A A 88 -2.099 27.700 4.771 1.00 28.52 N
ATOM 21 C2 A A 88 -1.490 27.307 3.643 1.00 31.05 C
ATOM 22 N3 A A 88 -0.211 27.003 3.448 1.00 29.69 N
ATOM 23 C4 A A 88 0.490 27.133 4.582 1.00 28.32 C
ATOM 24 P U A 89 5.886 30.213 2.916 1.00 29.90 P
ATOM 25 OP1 U A 89 6.444 30.890 1.712 1.00 31.85 O
ATOM 26 OP2 U A 89 6.789 29.929 4.052 1.00 26.66 O
ATOM 27 O5' U A 89 4.623 31.019 3.407 1.00 26.03 O
TER
ATOM 1 O3' A B 86 1.720 25.210 11.099 1.00 23.00 O
ATOM 2 P C B 87 3.317 25.079 11.180 1.00 24.07 P
ATOM 3 OP1 C B 87 3.629 24.340 12.423 1.00 24.20 O
ATOM 4 OP2 C B 87 3.806 26.446 10.991 1.00 21.18 O
ATOM 5 O5' C B 87 3.654 24.236 9.876 1.00 24.26 O
ATOM 6 C5' C B 87 4.923 23.616 9.743 1.00 26.55 C
ATOM 7 C4' C B 87 5.223 23.232 8.312 1.00 25.16 C
ATOM 8 O4' C B 87 4.222 22.303 7.807 1.00 26.61 O
ATOM 9 C3' C B 87 5.224 24.351 7.285 1.00 25.38 C
ATOM 10 O3' C B 87 6.412 25.115 7.313 1.00 24.60 O
ATOM 11 C2' C B 87 5.079 23.567 5.987 1.00 28.38 C
ATOM 12 O2' C B 87 6.340 22.996 5.672 1.00 27.41 O
ATOM 13 C1' C B 87 4.100 22.464 6.406 1.00 28.95 C
ATOM 14 N1 C B 87 2.729 22.890 6.059 1.00 32.25 N
ATOM 15 C2 C B 87 2.351 22.882 4.712 1.00 30.92 C
ATOM 16 O2 C B 87 3.172 22.486 3.870 1.00 33.72 O
ATOM 17 N3 C B 87 1.116 23.300 4.368 1.00 30.33 N
ATOM 18 C4 C B 87 0.267 23.707 5.305 1.00 31.70 C
ATOM 19 N4 C B 87 -0.943 24.107 4.920 1.00 33.51 N
ATOM 20 C5 C B 87 0.624 23.741 6.683 1.00 31.08 C
ATOM 21 C6 C B 87 1.855 23.331 7.015 1.00 31.86 C
ATOM 22 P A B 88 6.342 26.713 7.288 1.00 26.26 P
ATOM 23 OP1 A B 88 7.771 27.133 7.155 1.00 26.56 O
ATOM 24 OP2 A B 88 5.506 27.193 8.409 1.00 19.52 O
ATOM 25 O5' A B 88 5.531 27.008 5.963 1.00 27.75 O
TER
ATOM 2 P A A 88 6.342 26.713 7.288 1.00 26.26 P
ATOM 3 OP1 A A 88 7.771 27.133 7.155 1.00 26.56 O
ATOM 4 OP2 A A 88 5.506 27.193 8.409 1.00 19.52 O
ATOM 5 O5' A A 88 5.531 27.008 5.963 1.00 27.75 O
ATOM 6 C5' A A 88 6.114 26.765 4.696 1.00 28.65 C
ATOM 7 C4' A A 88 5.028 26.742 3.662 1.00 26.63 C
ATOM 8 O4' A A 88 3.913 25.965 4.174 1.00 28.53 O
ATOM 9 C3' A A 88 4.403 28.087 3.343 1.00 24.84 C
ATOM 10 O3' A A 88 5.171 28.859 2.437 1.00 23.93 O
ATOM 11 C2' A A 88 3.058 27.679 2.771 1.00 29.00 C
ATOM 12 O2' A A 88 3.213 27.235 1.434 1.00 30.46 O
ATOM 13 C1' A A 88 2.711 26.478 3.649 1.00 27.28 C
ATOM 14 N9 A A 88 1.826 26.892 4.745 1.00 27.52 N
ATOM 15 C8 A A 88 2.105 27.151 6.061 1.00 27.10 C
ATOM 16 N7 A A 88 1.047 27.530 6.744 1.00 24.95 N
ATOM 17 C5 A A 88 0.015 27.522 5.818 1.00 27.92 C
ATOM 18 C6 A A 88 -1.364 27.815 5.900 1.00 29.17 C
ATOM 19 N6 A A 88 -1.996 28.200 7.017 1.00 29.99 N
ATOM 20 N1 A A 88 -2.099 27.700 4.771 1.00 28.52 N
ATOM 21 C2 A A 88 -1.490 27.307 3.643 1.00 31.05 C
ATOM 22 N3 A A 88 -0.211 27.003 3.448 1.00 29.69 N
ATOM 23 C4 A A 88 0.490 27.133 4.582 1.00 28.32 C
ATOM 24 P U A 89 5.886 30.213 2.916 1.00 29.90 P
ATOM 25 OP1 U A 89 6.444 30.890 1.712 1.00 31.85 O
ATOM 26 OP2 U A 89 6.789 29.929 4.052 1.00 26.66 O
ATOM 27 O5' U A 89 4.623 31.019 3.407 1.00 26.03 O
TER
ATOM 1 O3' A B 86 1.720 25.210 11.099 1.00 23.00 O
ATOM 2 P C B 87 3.317 25.079 11.180 1.00 24.07 P
ATOM 3 OP1 C B 87 3.629 24.340 12.423 1.00 24.20 O
ATOM 4 OP2 C B 87 3.806 26.446 10.991 1.00 21.18 O
ATOM 5 O5' C B 87 3.654 24.236 9.876 1.00 24.26 O
ATOM 6 C5' C B 87 4.923 23.616 9.743 1.00 26.55 C
ATOM 7 C4' C B 87 5.223 23.232 8.312 1.00 25.16 C
ATOM 8 O4' C B 87 4.222 22.303 7.807 1.00 26.61 O
ATOM 9 C3' C B 87 5.224 24.351 7.285 1.00 25.38 C
ATOM 10 O3' C B 87 6.412 25.115 7.313 1.00 24.60 O
ATOM 11 C2' C B 87 5.079 23.567 5.987 1.00 28.38 C
ATOM 12 O2' C B 87 6.340 22.996 5.672 1.00 27.41 O
ATOM 13 C1' C B 87 4.100 22.464 6.406 1.00 28.95 C
ATOM 14 N1 C B 87 2.729 22.890 6.059 1.00 32.25 N
ATOM 15 C2 C B 87 2.351 22.882 4.712 1.00 30.92 C
ATOM 16 O2 C B 87 3.172 22.486 3.870 1.00 33.72 O
ATOM 17 N3 C B 87 1.116 23.300 4.368 1.00 30.33 N
ATOM 18 C4 C B 87 0.267 23.707 5.305 1.00 31.70 C
ATOM 19 N4 C B 87 -0.943 24.107 4.920 1.00 33.51 N
ATOM 20 C5 C B 87 0.624 23.741 6.683 1.00 31.08 C
ATOM 21 C6 C B 87 1.855 23.331 7.015 1.00 31.86 C
ATOM 22 P A B 88 6.342 26.713 7.288 1.00 26.26 P
ATOM 23 OP1 A B 88 7.771 27.133 7.155 1.00 26.56 O
ATOM 24 OP2 A B 88 5.506 27.193 8.409 1.00 19.52 O
ATOM 25 O5' A B 88 5.531 27.008 5.963 1.00 27.75 O
TER
Atoms:
OP1: (7.771,27.133,7.155)
OP2: (5.506,27.193,8.409)
C3': (4.403,28.087,3.343)
C1': (2.711,26.478,3.649)
C5': (6.114,26.765,4.696)
O4': (3.913,25.965,4.174)
C8: (2.105,27.151,6.061)
O2': (3.213,27.235,1.434)
C6: (-1.364,27.815,5.900)
C5: (0.015,27.522,5.818)
C4: (0.490,27.133,4.582)
P: (6.342,26.713,7.288)
C4': (5.028,26.742,3.662)
C2': (3.058,27.679,2.771)
C2: (-1.490,27.307,3.643)
N1: (-2.099,27.700,4.771)
N3: (-0.211,27.003,3.448)
N6: (-1.996,28.200,7.017)
N7: (1.047,27.530,6.744)
N9: (1.826,26.892,4.745)
O5': (5.531,27.008,5.963)
O3': (5.171,28.859,2.437)
OP2: (5.506,27.193,8.409)
C3': (4.403,28.087,3.343)
C1': (2.711,26.478,3.649)
C5': (6.114,26.765,4.696)
O4': (3.913,25.965,4.174)
C8: (2.105,27.151,6.061)
O2': (3.213,27.235,1.434)
C6: (-1.364,27.815,5.900)
C5: (0.015,27.522,5.818)
C4: (0.490,27.133,4.582)
P: (6.342,26.713,7.288)
C4': (5.028,26.742,3.662)
C2': (3.058,27.679,2.771)
C2: (-1.490,27.307,3.643)
N1: (-2.099,27.700,4.771)
N3: (-0.211,27.003,3.448)
N6: (-1.996,28.200,7.017)
N7: (1.047,27.530,6.744)
N9: (1.826,26.892,4.745)
O5': (5.531,27.008,5.963)
O3': (5.171,28.859,2.437)
C2: (2.351,22.882,4.712)
OP1: (3.629,24.340,12.423)
OP2: (3.806,26.446,10.991)
C4: (0.267,23.707,5.305)
O5': (3.654,24.236,9.876)
C3': (5.224,24.351,7.285)
C1': (4.100,22.464,6.406)
O4': (4.222,22.303,7.807)
C5': (4.923,23.616,9.743)
P: (3.317,25.079,11.180)
O2: (3.172,22.486,3.870)
C4': (5.223,23.232,8.312)
C2': (5.079,23.567,5.987)
O2': (6.340,22.996,5.672)
N1: (2.729,22.890,6.059)
N3: (1.116,23.300,4.368)
N4: (-0.943,24.107,4.920)
C6: (1.855,23.331,7.015)
C5: (0.624,23.741,6.683)
O3': (6.412,25.115,7.313)
OP1: (3.629,24.340,12.423)
OP2: (3.806,26.446,10.991)
C4: (0.267,23.707,5.305)
O5': (3.654,24.236,9.876)
C3': (5.224,24.351,7.285)
C1': (4.100,22.464,6.406)
O4': (4.222,22.303,7.807)
C5': (4.923,23.616,9.743)
P: (3.317,25.079,11.180)
O2: (3.172,22.486,3.870)
C4': (5.223,23.232,8.312)
C2': (5.079,23.567,5.987)
O2': (6.340,22.996,5.672)
N1: (2.729,22.890,6.059)
N3: (1.116,23.300,4.368)
N4: (-0.943,24.107,4.920)
C6: (1.855,23.331,7.015)
C5: (0.624,23.741,6.683)
O3': (6.412,25.115,7.313)
Image (generated by PyMOL):