Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:01237:01236
Extra
PDB:
ATOM 1 O3' C A1236 10.260 86.842 58.737 1.00 50.48 O
ATOM 2 P A A1237 10.269 86.705 60.333 1.00 50.69 P
ATOM 3 OP1 A A1237 11.443 85.879 60.682 1.00 48.69 O
ATOM 4 OP2 A A1237 8.917 86.285 60.784 1.00 52.45 O
ATOM 5 O5' A A1237 10.511 88.193 60.841 1.00 54.07 O
ATOM 6 C5' A A1237 11.771 88.859 60.627 1.00 58.21 C
ATOM 7 C4' A A1237 11.657 90.312 61.012 1.00 61.57 C
ATOM 8 O4' A A1237 10.738 90.978 60.110 1.00 61.08 O
ATOM 9 C3' A A1237 11.073 90.560 62.391 1.00 65.12 C
ATOM 10 O3' A A1237 12.070 90.454 63.392 1.00 71.44 O
ATOM 11 C2' A A1237 10.516 91.972 62.264 1.00 63.36 C
ATOM 12 O2' A A1237 11.499 92.975 62.416 1.00 63.90 O
ATOM 13 C1' A A1237 10.004 91.961 60.820 1.00 61.75 C
ATOM 14 N9 A A1237 8.586 91.629 60.720 1.00 61.06 N
ATOM 15 C8 A A1237 8.005 90.388 60.786 1.00 61.04 C
ATOM 16 N7 A A1237 6.701 90.411 60.686 1.00 60.42 N
ATOM 17 C5 A A1237 6.402 91.755 60.539 1.00 61.40 C
ATOM 18 C6 A A1237 5.185 92.441 60.393 1.00 62.92 C
ATOM 19 N6 A A1237 3.991 91.839 60.384 1.00 62.56 N
ATOM 20 N1 A A1237 5.234 93.785 60.262 1.00 63.67 N
ATOM 21 C2 A A1237 6.431 94.386 60.285 1.00 63.04 C
ATOM 22 N3 A A1237 7.642 93.851 60.425 1.00 61.89 N
ATOM 23 C4 A A1237 7.555 92.517 60.548 1.00 61.17 C
ATOM 24 P U A1238 11.733 89.727 64.786 1.00 77.02 P
ATOM 25 OP1 U A1238 11.924 88.269 64.574 1.00 74.63 O
ATOM 26 OP2 U A1238 10.423 90.233 65.285 1.00 75.65 O
ATOM 27 O5' U A1238 12.897 90.244 65.749 1.00 82.04 O
TER
ATOM 1 O3' U B1235 4.505 86.020 58.986 1.00 47.71 O
ATOM 2 P C B1236 5.354 85.245 57.859 1.00 48.52 P
ATOM 3 OP1 C B1236 4.558 85.283 56.604 1.00 47.19 O
ATOM 4 OP2 C B1236 5.786 83.933 58.410 1.00 45.96 O
ATOM 5 O5' C B1236 6.639 86.168 57.678 1.00 49.15 O
ATOM 6 C5' C B1236 7.818 85.691 56.997 1.00 49.85 C
ATOM 7 C4' C B1236 8.807 86.821 56.817 1.00 49.31 C
ATOM 8 O4' C B1236 8.218 87.854 55.988 1.00 49.71 O
ATOM 9 C3' C B1236 9.207 87.545 58.091 1.00 49.23 C
ATOM 10 O3' C B1236 10.260 86.842 58.737 1.00 50.48 O
ATOM 11 C2' C B1236 9.655 88.908 57.574 1.00 50.02 C
ATOM 12 O2' C B1236 10.971 88.898 57.054 1.00 50.13 O
ATOM 13 C1' C B1236 8.685 89.124 56.410 1.00 49.76 C
ATOM 14 N1 C B1236 7.526 89.986 56.698 1.00 49.97 N
ATOM 15 C2 C B1236 7.697 91.380 56.678 1.00 51.16 C
ATOM 16 O2 C B1236 8.825 91.848 56.462 1.00 53.44 O
ATOM 17 N3 C B1236 6.629 92.178 56.895 1.00 50.67 N
ATOM 18 C4 C B1236 5.432 91.641 57.130 1.00 49.33 C
ATOM 19 N4 C B1236 4.404 92.469 57.311 1.00 49.71 N
ATOM 20 C5 C B1236 5.234 90.232 57.182 1.00 48.79 C
ATOM 21 C6 C B1236 6.297 89.449 56.964 1.00 49.14 C
ATOM 22 P A B1237 10.269 86.705 60.333 1.00 50.69 P
ATOM 23 OP1 A B1237 11.443 85.879 60.682 1.00 48.69 O
ATOM 24 OP2 A B1237 8.917 86.285 60.784 1.00 52.45 O
ATOM 25 O5' A B1237 10.511 88.193 60.841 1.00 54.07 O
TER
ATOM 2 P A A1237 10.269 86.705 60.333 1.00 50.69 P
ATOM 3 OP1 A A1237 11.443 85.879 60.682 1.00 48.69 O
ATOM 4 OP2 A A1237 8.917 86.285 60.784 1.00 52.45 O
ATOM 5 O5' A A1237 10.511 88.193 60.841 1.00 54.07 O
ATOM 6 C5' A A1237 11.771 88.859 60.627 1.00 58.21 C
ATOM 7 C4' A A1237 11.657 90.312 61.012 1.00 61.57 C
ATOM 8 O4' A A1237 10.738 90.978 60.110 1.00 61.08 O
ATOM 9 C3' A A1237 11.073 90.560 62.391 1.00 65.12 C
ATOM 10 O3' A A1237 12.070 90.454 63.392 1.00 71.44 O
ATOM 11 C2' A A1237 10.516 91.972 62.264 1.00 63.36 C
ATOM 12 O2' A A1237 11.499 92.975 62.416 1.00 63.90 O
ATOM 13 C1' A A1237 10.004 91.961 60.820 1.00 61.75 C
ATOM 14 N9 A A1237 8.586 91.629 60.720 1.00 61.06 N
ATOM 15 C8 A A1237 8.005 90.388 60.786 1.00 61.04 C
ATOM 16 N7 A A1237 6.701 90.411 60.686 1.00 60.42 N
ATOM 17 C5 A A1237 6.402 91.755 60.539 1.00 61.40 C
ATOM 18 C6 A A1237 5.185 92.441 60.393 1.00 62.92 C
ATOM 19 N6 A A1237 3.991 91.839 60.384 1.00 62.56 N
ATOM 20 N1 A A1237 5.234 93.785 60.262 1.00 63.67 N
ATOM 21 C2 A A1237 6.431 94.386 60.285 1.00 63.04 C
ATOM 22 N3 A A1237 7.642 93.851 60.425 1.00 61.89 N
ATOM 23 C4 A A1237 7.555 92.517 60.548 1.00 61.17 C
ATOM 24 P U A1238 11.733 89.727 64.786 1.00 77.02 P
ATOM 25 OP1 U A1238 11.924 88.269 64.574 1.00 74.63 O
ATOM 26 OP2 U A1238 10.423 90.233 65.285 1.00 75.65 O
ATOM 27 O5' U A1238 12.897 90.244 65.749 1.00 82.04 O
TER
ATOM 1 O3' U B1235 4.505 86.020 58.986 1.00 47.71 O
ATOM 2 P C B1236 5.354 85.245 57.859 1.00 48.52 P
ATOM 3 OP1 C B1236 4.558 85.283 56.604 1.00 47.19 O
ATOM 4 OP2 C B1236 5.786 83.933 58.410 1.00 45.96 O
ATOM 5 O5' C B1236 6.639 86.168 57.678 1.00 49.15 O
ATOM 6 C5' C B1236 7.818 85.691 56.997 1.00 49.85 C
ATOM 7 C4' C B1236 8.807 86.821 56.817 1.00 49.31 C
ATOM 8 O4' C B1236 8.218 87.854 55.988 1.00 49.71 O
ATOM 9 C3' C B1236 9.207 87.545 58.091 1.00 49.23 C
ATOM 10 O3' C B1236 10.260 86.842 58.737 1.00 50.48 O
ATOM 11 C2' C B1236 9.655 88.908 57.574 1.00 50.02 C
ATOM 12 O2' C B1236 10.971 88.898 57.054 1.00 50.13 O
ATOM 13 C1' C B1236 8.685 89.124 56.410 1.00 49.76 C
ATOM 14 N1 C B1236 7.526 89.986 56.698 1.00 49.97 N
ATOM 15 C2 C B1236 7.697 91.380 56.678 1.00 51.16 C
ATOM 16 O2 C B1236 8.825 91.848 56.462 1.00 53.44 O
ATOM 17 N3 C B1236 6.629 92.178 56.895 1.00 50.67 N
ATOM 18 C4 C B1236 5.432 91.641 57.130 1.00 49.33 C
ATOM 19 N4 C B1236 4.404 92.469 57.311 1.00 49.71 N
ATOM 20 C5 C B1236 5.234 90.232 57.182 1.00 48.79 C
ATOM 21 C6 C B1236 6.297 89.449 56.964 1.00 49.14 C
ATOM 22 P A B1237 10.269 86.705 60.333 1.00 50.69 P
ATOM 23 OP1 A B1237 11.443 85.879 60.682 1.00 48.69 O
ATOM 24 OP2 A B1237 8.917 86.285 60.784 1.00 52.45 O
ATOM 25 O5' A B1237 10.511 88.193 60.841 1.00 54.07 O
TER
Atoms:
OP1: (11.443,85.879,60.682)
OP2: (8.917,86.285,60.784)
C3': (11.073,90.560,62.391)
C1': (10.004,91.961,60.820)
C5': (11.771,88.859,60.627)
O4': (10.738,90.978,60.110)
C8: (8.005,90.388,60.786)
O2': (11.499,92.975,62.416)
C6: (5.185,92.441,60.393)
C5: (6.402,91.755,60.539)
C4: (7.555,92.517,60.548)
P: (10.269,86.705,60.333)
C4': (11.657,90.312,61.012)
C2': (10.516,91.972,62.264)
C2: (6.431,94.386,60.285)
N1: (5.234,93.785,60.262)
N3: (7.642,93.851,60.425)
N6: (3.991,91.839,60.384)
N7: (6.701,90.411,60.686)
N9: (8.586,91.629,60.720)
O5': (10.511,88.193,60.841)
O3': (12.070,90.454,63.392)
OP2: (8.917,86.285,60.784)
C3': (11.073,90.560,62.391)
C1': (10.004,91.961,60.820)
C5': (11.771,88.859,60.627)
O4': (10.738,90.978,60.110)
C8: (8.005,90.388,60.786)
O2': (11.499,92.975,62.416)
C6: (5.185,92.441,60.393)
C5: (6.402,91.755,60.539)
C4: (7.555,92.517,60.548)
P: (10.269,86.705,60.333)
C4': (11.657,90.312,61.012)
C2': (10.516,91.972,62.264)
C2: (6.431,94.386,60.285)
N1: (5.234,93.785,60.262)
N3: (7.642,93.851,60.425)
N6: (3.991,91.839,60.384)
N7: (6.701,90.411,60.686)
N9: (8.586,91.629,60.720)
O5': (10.511,88.193,60.841)
O3': (12.070,90.454,63.392)
C2: (7.697,91.380,56.678)
OP1: (4.558,85.283,56.604)
OP2: (5.786,83.933,58.410)
C4: (5.432,91.641,57.130)
O5': (6.639,86.168,57.678)
C3': (9.207,87.545,58.091)
C1': (8.685,89.124,56.410)
O4': (8.218,87.854,55.988)
C5': (7.818,85.691,56.997)
P: (5.354,85.245,57.859)
O2: (8.825,91.848,56.462)
C4': (8.807,86.821,56.817)
C2': (9.655,88.908,57.574)
O2': (10.971,88.898,57.054)
N1: (7.526,89.986,56.698)
N3: (6.629,92.178,56.895)
N4: (4.404,92.469,57.311)
C6: (6.297,89.449,56.964)
C5: (5.234,90.232,57.182)
O3': (10.260,86.842,58.737)
OP1: (4.558,85.283,56.604)
OP2: (5.786,83.933,58.410)
C4: (5.432,91.641,57.130)
O5': (6.639,86.168,57.678)
C3': (9.207,87.545,58.091)
C1': (8.685,89.124,56.410)
O4': (8.218,87.854,55.988)
C5': (7.818,85.691,56.997)
P: (5.354,85.245,57.859)
O2: (8.825,91.848,56.462)
C4': (8.807,86.821,56.817)
C2': (9.655,88.908,57.574)
O2': (10.971,88.898,57.054)
N1: (7.526,89.986,56.698)
N3: (6.629,92.178,56.895)
N4: (4.404,92.469,57.311)
C6: (6.297,89.449,56.964)
C5: (5.234,90.232,57.182)
O3': (10.260,86.842,58.737)
Image (generated by PyMOL):