Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:01086:01018
Extra
PDB:
ATOM 1 O3' C A1085 45.251 99.038 111.962 1.00 53.92 O
ATOM 2 P C A1086 46.711 99.063 111.286 1.00 53.10 P
ATOM 3 OP1 C A1086 46.597 99.832 110.026 1.00 54.71 O
ATOM 4 OP2 C A1086 47.276 97.685 111.255 1.00 51.17 O
ATOM 5 O5' C A1086 47.561 99.944 112.301 1.00 53.58 O
ATOM 6 C5' C A1086 48.915 99.607 112.630 1.00 50.24 C
ATOM 7 C4' C A1086 49.670 100.856 112.973 1.00 49.58 C
ATOM 8 O4' C A1086 49.800 101.663 111.777 1.00 49.23 O
ATOM 9 C3' C A1086 48.971 101.764 113.974 1.00 50.02 C
ATOM 10 O3' C A1086 49.251 101.371 115.323 1.00 51.31 O
ATOM 11 C2' C A1086 49.573 103.127 113.650 1.00 50.64 C
ATOM 12 O2' C A1086 50.835 103.333 114.259 1.00 50.28 O
ATOM 13 C1' C A1086 49.743 103.038 112.126 1.00 49.91 C
ATOM 14 N1 C A1086 48.685 103.692 111.324 1.00 49.66 N
ATOM 15 C2 C A1086 48.426 105.064 111.514 1.00 50.82 C
ATOM 16 O2 C A1086 49.092 105.698 112.353 1.00 52.87 O
ATOM 17 N3 C A1086 47.465 105.663 110.770 1.00 48.50 N
ATOM 18 C4 C A1086 46.792 104.958 109.858 1.00 46.98 C
ATOM 19 N4 C A1086 45.876 105.595 109.127 1.00 46.57 N
ATOM 20 C5 C A1086 47.032 103.572 109.649 1.00 46.47 C
ATOM 21 C6 C A1086 47.971 102.983 110.398 1.00 47.76 C
ATOM 22 P U A1087 48.046 101.089 116.359 1.00 50.59 P
ATOM 23 OP1 U A1087 48.607 101.104 117.731 1.00 52.01 O
ATOM 24 OP2 U A1087 47.327 99.884 115.882 1.00 48.27 O
ATOM 25 O5' U A1087 47.104 102.362 116.222 1.00 49.70 O
TER
ATOM 1 O3' A B1017 54.130 98.622 110.119 1.00 45.34 O
ATOM 2 P G B1018 52.854 97.765 110.602 1.00 46.03 P
ATOM 3 OP1 G B1018 52.441 98.305 111.929 1.00 40.08 O
ATOM 4 OP2 G B1018 53.162 96.313 110.448 1.00 42.15 O
ATOM 5 O5' G B1018 51.734 98.121 109.530 1.00 43.84 O
ATOM 6 C5' G B1018 51.225 99.448 109.414 1.00 42.21 C
ATOM 7 C4' G B1018 51.354 99.922 107.994 1.00 41.96 C
ATOM 8 O4' G B1018 50.784 101.253 107.902 1.00 42.90 O
ATOM 9 C3' G B1018 52.786 100.053 107.492 1.00 43.71 C
ATOM 10 O3' G B1018 52.780 99.880 106.073 1.00 42.99 O
ATOM 11 C2' G B1018 53.109 101.498 107.858 1.00 43.00 C
ATOM 12 O2' G B1018 54.187 102.028 107.126 1.00 43.84 O
ATOM 13 C1' G B1018 51.781 102.170 107.508 1.00 42.10 C
ATOM 14 N9 G B1018 51.469 103.461 108.115 1.00 40.55 N
ATOM 15 C8 G B1018 52.119 104.103 109.139 1.00 40.71 C
ATOM 16 N7 G B1018 51.591 105.259 109.435 1.00 39.86 N
ATOM 17 C5 G B1018 50.524 105.383 108.560 1.00 39.28 C
ATOM 18 C6 G B1018 49.576 106.427 108.407 1.00 39.54 C
ATOM 19 O6 G B1018 49.484 107.480 109.038 1.00 36.61 O
ATOM 20 N1 G B1018 48.666 106.146 107.390 1.00 39.97 N
ATOM 21 C2 G B1018 48.667 105.011 106.620 1.00 41.26 C
ATOM 22 N2 G B1018 47.716 104.932 105.677 1.00 42.50 N
ATOM 23 N3 G B1018 49.538 104.028 106.760 1.00 41.39 N
ATOM 24 C4 G B1018 50.434 104.281 107.741 1.00 40.26 C
ATOM 25 P C B1019 53.624 98.689 105.398 1.00 47.09 P
ATOM 26 OP1 C B1019 53.242 98.621 103.960 1.00 47.92 O
ATOM 27 OP2 C B1019 53.499 97.466 106.233 1.00 47.16 O
ATOM 28 O5' C B1019 55.120 99.235 105.432 1.00 45.91 O
TER
ATOM 2 P C A1086 46.711 99.063 111.286 1.00 53.10 P
ATOM 3 OP1 C A1086 46.597 99.832 110.026 1.00 54.71 O
ATOM 4 OP2 C A1086 47.276 97.685 111.255 1.00 51.17 O
ATOM 5 O5' C A1086 47.561 99.944 112.301 1.00 53.58 O
ATOM 6 C5' C A1086 48.915 99.607 112.630 1.00 50.24 C
ATOM 7 C4' C A1086 49.670 100.856 112.973 1.00 49.58 C
ATOM 8 O4' C A1086 49.800 101.663 111.777 1.00 49.23 O
ATOM 9 C3' C A1086 48.971 101.764 113.974 1.00 50.02 C
ATOM 10 O3' C A1086 49.251 101.371 115.323 1.00 51.31 O
ATOM 11 C2' C A1086 49.573 103.127 113.650 1.00 50.64 C
ATOM 12 O2' C A1086 50.835 103.333 114.259 1.00 50.28 O
ATOM 13 C1' C A1086 49.743 103.038 112.126 1.00 49.91 C
ATOM 14 N1 C A1086 48.685 103.692 111.324 1.00 49.66 N
ATOM 15 C2 C A1086 48.426 105.064 111.514 1.00 50.82 C
ATOM 16 O2 C A1086 49.092 105.698 112.353 1.00 52.87 O
ATOM 17 N3 C A1086 47.465 105.663 110.770 1.00 48.50 N
ATOM 18 C4 C A1086 46.792 104.958 109.858 1.00 46.98 C
ATOM 19 N4 C A1086 45.876 105.595 109.127 1.00 46.57 N
ATOM 20 C5 C A1086 47.032 103.572 109.649 1.00 46.47 C
ATOM 21 C6 C A1086 47.971 102.983 110.398 1.00 47.76 C
ATOM 22 P U A1087 48.046 101.089 116.359 1.00 50.59 P
ATOM 23 OP1 U A1087 48.607 101.104 117.731 1.00 52.01 O
ATOM 24 OP2 U A1087 47.327 99.884 115.882 1.00 48.27 O
ATOM 25 O5' U A1087 47.104 102.362 116.222 1.00 49.70 O
TER
ATOM 1 O3' A B1017 54.130 98.622 110.119 1.00 45.34 O
ATOM 2 P G B1018 52.854 97.765 110.602 1.00 46.03 P
ATOM 3 OP1 G B1018 52.441 98.305 111.929 1.00 40.08 O
ATOM 4 OP2 G B1018 53.162 96.313 110.448 1.00 42.15 O
ATOM 5 O5' G B1018 51.734 98.121 109.530 1.00 43.84 O
ATOM 6 C5' G B1018 51.225 99.448 109.414 1.00 42.21 C
ATOM 7 C4' G B1018 51.354 99.922 107.994 1.00 41.96 C
ATOM 8 O4' G B1018 50.784 101.253 107.902 1.00 42.90 O
ATOM 9 C3' G B1018 52.786 100.053 107.492 1.00 43.71 C
ATOM 10 O3' G B1018 52.780 99.880 106.073 1.00 42.99 O
ATOM 11 C2' G B1018 53.109 101.498 107.858 1.00 43.00 C
ATOM 12 O2' G B1018 54.187 102.028 107.126 1.00 43.84 O
ATOM 13 C1' G B1018 51.781 102.170 107.508 1.00 42.10 C
ATOM 14 N9 G B1018 51.469 103.461 108.115 1.00 40.55 N
ATOM 15 C8 G B1018 52.119 104.103 109.139 1.00 40.71 C
ATOM 16 N7 G B1018 51.591 105.259 109.435 1.00 39.86 N
ATOM 17 C5 G B1018 50.524 105.383 108.560 1.00 39.28 C
ATOM 18 C6 G B1018 49.576 106.427 108.407 1.00 39.54 C
ATOM 19 O6 G B1018 49.484 107.480 109.038 1.00 36.61 O
ATOM 20 N1 G B1018 48.666 106.146 107.390 1.00 39.97 N
ATOM 21 C2 G B1018 48.667 105.011 106.620 1.00 41.26 C
ATOM 22 N2 G B1018 47.716 104.932 105.677 1.00 42.50 N
ATOM 23 N3 G B1018 49.538 104.028 106.760 1.00 41.39 N
ATOM 24 C4 G B1018 50.434 104.281 107.741 1.00 40.26 C
ATOM 25 P C B1019 53.624 98.689 105.398 1.00 47.09 P
ATOM 26 OP1 C B1019 53.242 98.621 103.960 1.00 47.92 O
ATOM 27 OP2 C B1019 53.499 97.466 106.233 1.00 47.16 O
ATOM 28 O5' C B1019 55.120 99.235 105.432 1.00 45.91 O
TER
Atoms:
C2: (48.426,105.064,111.514)
OP1: (46.597,99.832,110.026)
OP2: (47.276,97.685,111.255)
C4: (46.792,104.958,109.858)
O5': (47.561,99.944,112.301)
C3': (48.971,101.764,113.974)
C1': (49.743,103.038,112.126)
O4': (49.800,101.663,111.777)
C5': (48.915,99.607,112.630)
P: (46.711,99.063,111.286)
O2: (49.092,105.698,112.353)
C4': (49.670,100.856,112.973)
C2': (49.573,103.127,113.650)
O2': (50.835,103.333,114.259)
N1: (48.685,103.692,111.324)
N3: (47.465,105.663,110.770)
N4: (45.876,105.595,109.127)
C6: (47.971,102.983,110.398)
C5: (47.032,103.572,109.649)
O3': (49.251,101.371,115.323)
OP1: (46.597,99.832,110.026)
OP2: (47.276,97.685,111.255)
C4: (46.792,104.958,109.858)
O5': (47.561,99.944,112.301)
C3': (48.971,101.764,113.974)
C1': (49.743,103.038,112.126)
O4': (49.800,101.663,111.777)
C5': (48.915,99.607,112.630)
P: (46.711,99.063,111.286)
O2: (49.092,105.698,112.353)
C4': (49.670,100.856,112.973)
C2': (49.573,103.127,113.650)
O2': (50.835,103.333,114.259)
N1: (48.685,103.692,111.324)
N3: (47.465,105.663,110.770)
N4: (45.876,105.595,109.127)
C6: (47.971,102.983,110.398)
C5: (47.032,103.572,109.649)
O3': (49.251,101.371,115.323)
OP1: (52.441,98.305,111.929)
OP2: (53.162,96.313,110.448)
C3': (52.786,100.053,107.492)
C1': (51.781,102.170,107.508)
C5': (51.225,99.448,109.414)
O6: (49.484,107.480,109.038)
O4': (50.784,101.253,107.902)
C8: (52.119,104.103,109.139)
C2: (48.667,105.011,106.620)
C6: (49.576,106.427,108.407)
C5: (50.524,105.383,108.560)
C4: (50.434,104.281,107.741)
P: (52.854,97.765,110.602)
C4': (51.354,99.922,107.994)
C2': (53.109,101.498,107.858)
O2': (54.187,102.028,107.126)
N1: (48.666,106.146,107.390)
N2: (47.716,104.932,105.677)
N3: (49.538,104.028,106.760)
N7: (51.591,105.259,109.435)
N9: (51.469,103.461,108.115)
O5': (51.734,98.121,109.530)
O3': (52.780,99.880,106.073)
OP2: (53.162,96.313,110.448)
C3': (52.786,100.053,107.492)
C1': (51.781,102.170,107.508)
C5': (51.225,99.448,109.414)
O6: (49.484,107.480,109.038)
O4': (50.784,101.253,107.902)
C8: (52.119,104.103,109.139)
C2: (48.667,105.011,106.620)
C6: (49.576,106.427,108.407)
C5: (50.524,105.383,108.560)
C4: (50.434,104.281,107.741)
P: (52.854,97.765,110.602)
C4': (51.354,99.922,107.994)
C2': (53.109,101.498,107.858)
O2': (54.187,102.028,107.126)
N1: (48.666,106.146,107.390)
N2: (47.716,104.932,105.677)
N3: (49.538,104.028,106.760)
N7: (51.591,105.259,109.435)
N9: (51.469,103.461,108.115)
O5': (51.734,98.121,109.530)
O3': (52.780,99.880,106.073)
Image (generated by PyMOL):