ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A595:A1283

Extra

PDB:
ATOM 1 O3' C A 594 1.868 122.713 91.994 1.00 53.29 O
ATOM 2 P G A 595 3.431 123.091 91.891 1.00 54.08 P
ATOM 3 OP1 G A 595 4.255 122.208 92.776 1.00 53.46 O
ATOM 4 OP2 G A 595 3.499 124.564 92.053 1.00 52.76 O
ATOM 5 O5' G A 595 3.809 122.740 90.384 1.00 52.34 O
ATOM 6 C5' G A 595 3.650 121.406 89.878 1.00 50.99 C
ATOM 7 C4' G A 595 3.883 121.386 88.390 1.00 50.04 C
ATOM 8 O4' G A 595 2.903 122.241 87.739 1.00 49.79 O
ATOM 9 C3' G A 595 5.209 121.952 87.915 1.00 48.76 C
ATOM 10 O3' G A 595 6.274 121.015 88.008 1.00 50.06 O
ATOM 11 C2' G A 595 4.899 122.276 86.464 1.00 47.36 C
ATOM 12 O2' G A 595 4.857 121.112 85.675 1.00 47.50 O
ATOM 13 C1' G A 595 3.476 122.813 86.571 1.00 46.17 C
ATOM 14 N9 G A 595 3.446 124.267 86.681 1.00 43.24 N
ATOM 15 C8 G A 595 3.035 125.018 87.750 1.00 42.09 C
ATOM 16 N7 G A 595 3.095 126.297 87.527 1.00 41.23 N
ATOM 17 C5 G A 595 3.581 126.395 86.233 1.00 41.13 C
ATOM 18 C6 G A 595 3.840 127.533 85.434 1.00 41.49 C
ATOM 19 O6 G A 595 3.661 128.730 85.706 1.00 42.87 O
ATOM 20 N1 G A 595 4.343 127.178 84.192 1.00 40.07 N
ATOM 21 C2 G A 595 4.556 125.898 83.764 1.00 39.72 C
ATOM 22 N2 G A 595 5.049 125.765 82.519 1.00 38.88 N
ATOM 23 N3 G A 595 4.305 124.831 84.493 1.00 40.18 N
ATOM 24 C4 G A 595 3.820 125.152 85.707 1.00 41.15 C
ATOM 25 P A A 596 7.746 121.525 88.402 1.00 51.15 P
ATOM 26 OP1 A A 596 8.678 120.401 88.176 1.00 50.53 O
ATOM 27 OP2 A A 596 7.692 122.194 89.731 1.00 51.14 O
ATOM 28 O5' A A 596 8.064 122.647 87.326 1.00 50.73 O
TER

ATOM 1 O3' G B1282 10.117 129.902 80.873 1.00 51.80 O
ATOM 2 P G B1283 10.156 128.290 80.985 1.00 51.46 P
ATOM 3 OP1 G B1283 9.586 127.932 82.292 1.00 50.76 O
ATOM 4 OP2 G B1283 11.511 127.786 80.606 1.00 51.28 O
ATOM 5 O5' G B1283 9.097 127.782 79.911 1.00 50.52 O
ATOM 6 C5' G B1283 7.690 127.953 80.160 1.00 49.49 C
ATOM 7 C4' G B1283 6.873 127.296 79.079 1.00 48.34 C
ATOM 8 O4' G B1283 7.300 127.815 77.792 1.00 47.05 O
ATOM 9 C3' G B1283 7.035 125.792 78.908 1.00 47.33 C
ATOM 10 O3' G B1283 6.339 124.991 79.853 1.00 46.29 O
ATOM 11 C2' G B1283 6.509 125.586 77.499 1.00 47.07 C
ATOM 12 O2' G B1283 5.099 125.581 77.420 1.00 47.52 O
ATOM 13 C1' G B1283 7.089 126.817 76.794 1.00 46.45 C
ATOM 14 N9 G B1283 8.363 126.483 76.163 1.00 44.93 N
ATOM 15 C8 G B1283 9.604 126.922 76.518 1.00 45.22 C
ATOM 16 N7 G B1283 10.557 126.376 75.814 1.00 45.82 N
ATOM 17 C5 G B1283 9.904 125.533 74.935 1.00 44.51 C
ATOM 18 C6 G B1283 10.423 124.664 73.957 1.00 45.31 C
ATOM 19 O6 G B1283 11.602 124.419 73.701 1.00 45.83 O
ATOM 20 N1 G B1283 9.414 124.024 73.247 1.00 44.93 N
ATOM 21 C2 G B1283 8.074 124.190 73.464 1.00 44.71 C
ATOM 22 N2 G B1283 7.254 123.518 72.633 1.00 44.44 N
ATOM 23 N3 G B1283 7.578 124.972 74.416 1.00 43.96 N
ATOM 24 C4 G B1283 8.550 125.610 75.106 1.00 44.22 C
ATOM 25 P G B1284 6.932 123.550 80.232 1.00 47.68 P
ATOM 26 OP1 G B1284 6.081 122.932 81.275 1.00 48.58 O
ATOM 27 OP2 G B1284 8.378 123.726 80.479 1.00 48.31 O
ATOM 28 O5' G B1284 6.780 122.684 78.903 1.00 44.89 O
TER

Atoms:
OP1: (4.255,122.208,92.776)
OP2: (3.499,124.564,92.053)
C3': (5.209,121.952,87.915)
C1': (3.476,122.813,86.571)
C5': (3.650,121.406,89.878)
O6: (3.661,128.730,85.706)
O4': (2.903,122.241,87.739)
C8: (3.035,125.018,87.750)
C2: (4.556,125.898,83.764)
C6: (3.840,127.533,85.434)
C5: (3.581,126.395,86.233)
C4: (3.820,125.152,85.707)
P: (3.431,123.091,91.891)
C4': (3.883,121.386,88.390)
C2': (4.899,122.276,86.464)
O2': (4.857,121.112,85.675)
N1: (4.343,127.178,84.192)
N2: (5.049,125.765,82.519)
N3: (4.305,124.831,84.493)
N7: (3.095,126.297,87.527)
N9: (3.446,124.267,86.681)
O5': (3.809,122.740,90.384)
O3': (6.274,121.015,88.008)
OP1: (9.586,127.932,82.292)
OP2: (11.511,127.786,80.606)
C3': (7.035,125.792,78.908)
C1': (7.089,126.817,76.794)
C5': (7.690,127.953,80.160)
O6: (11.602,124.419,73.701)
O4': (7.300,127.815,77.792)
C8: (9.604,126.922,76.518)
C2: (8.074,124.190,73.464)
C6: (10.423,124.664,73.957)
C5: (9.904,125.533,74.935)
C4: (8.550,125.610,75.106)
P: (10.156,128.290,80.985)
C4': (6.873,127.296,79.079)
C2': (6.509,125.586,77.499)
O2': (5.099,125.581,77.420)
N1: (9.414,124.024,73.247)
N2: (7.254,123.518,72.633)
N3: (7.578,124.972,74.416)
N7: (10.557,126.376,75.814)
N9: (8.363,126.483,76.163)
O5': (9.097,127.782,79.911)
O3': (6.339,124.991,79.853)
Image (generated by PyMOL):
PyMOL image
show in jmol