ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A1582:A1581

Extra

PDB:
ATOM 1 O3' C A1581 16.701 -52.324 6.439 1.00 35.46 O
ATOM 2 P A A1582 16.668 -53.682 5.570 1.00 54.99 P
ATOM 3 OP1 A A1582 15.397 -54.379 5.908 1.00 65.26 O
ATOM 4 OP2 A A1582 17.940 -54.398 5.808 1.00 60.80 O
ATOM 5 O5' A A1582 16.620 -53.139 4.068 1.00 44.05 O
ATOM 6 C5' A A1582 15.383 -52.889 3.425 1.00 40.99 C
ATOM 7 C4' A A1582 15.567 -52.135 2.146 1.00 29.33 C
ATOM 8 O4' A A1582 16.439 -51.006 2.368 1.00 47.24 O
ATOM 9 C3' A A1582 16.253 -52.883 1.038 1.00 36.02 C
ATOM 10 O3' A A1582 15.415 -53.793 0.388 1.00 35.44 O
ATOM 11 C2' A A1582 16.748 -51.766 0.147 1.00 40.13 C
ATOM 12 O2' A A1582 15.681 -51.218 -0.594 1.00 48.61 O
ATOM 13 C1' A A1582 17.181 -50.743 1.189 1.00 48.14 C
ATOM 14 N9 A A1582 18.620 -50.856 1.499 1.00 46.85 N
ATOM 15 C8 A A1582 19.179 -51.435 2.603 1.00 47.01 C
ATOM 16 N7 A A1582 20.498 -51.402 2.604 1.00 51.87 N
ATOM 17 C5 A A1582 20.842 -50.755 1.429 1.00 46.45 C
ATOM 18 C6 A A1582 22.086 -50.412 0.866 1.00 47.28 C
ATOM 19 N6 A A1582 23.270 -50.688 1.431 1.00 49.92 N
ATOM 20 N1 A A1582 22.075 -49.785 -0.322 1.00 37.77 N
ATOM 21 C2 A A1582 20.894 -49.541 -0.867 1.00 41.97 C
ATOM 22 N3 A A1582 19.666 -49.804 -0.430 1.00 45.37 N
ATOM 23 C4 A A1582 19.694 -50.423 0.743 1.00 43.29 C
ATOM 24 P G A1583 15.738 -55.359 0.474 1.00 45.76 P
ATOM 25 OP1 G A1583 14.625 -56.074 -0.206 1.00 54.43 O
ATOM 26 OP2 G A1583 16.027 -55.667 1.899 1.00 43.14 O
ATOM 27 O5' G A1583 17.059 -55.484 -0.389 1.00 42.05 O
TER

ATOM 1 O3' U B1580 21.047 -52.260 10.446 1.00 38.67 O
ATOM 2 P C B1581 20.716 -53.182 9.173 1.00 46.08 P
ATOM 3 OP1 C B1581 20.377 -54.527 9.685 1.00 50.33 O
ATOM 4 OP2 C B1581 21.843 -53.048 8.215 1.00 45.61 O
ATOM 5 O5' C B1581 19.427 -52.485 8.577 1.00 39.16 O
ATOM 6 C5' C B1581 19.560 -51.278 7.862 1.00 39.15 C
ATOM 7 C4' C B1581 18.239 -50.702 7.437 1.00 39.70 C
ATOM 8 O4' C B1581 18.437 -49.294 7.159 1.00 41.97 O
ATOM 9 C3' C B1581 17.642 -51.305 6.160 1.00 40.50 C
ATOM 10 O3' C B1581 16.701 -52.324 6.439 1.00 35.46 O
ATOM 11 C2' C B1581 17.040 -50.120 5.424 1.00 44.04 C
ATOM 12 O2' C B1581 15.708 -49.900 5.859 1.00 42.94 O
ATOM 13 C1' C B1581 17.911 -48.953 5.906 1.00 48.71 C
ATOM 14 N1 C B1581 19.049 -48.660 4.998 1.00 39.13 N
ATOM 15 C2 C B1581 18.905 -47.914 3.818 1.00 50.46 C
ATOM 16 O2 C B1581 17.781 -47.509 3.467 1.00 55.84 O
ATOM 17 N3 C B1581 20.007 -47.670 3.059 1.00 51.21 N
ATOM 18 C4 C B1581 21.202 -48.109 3.437 1.00 40.26 C
ATOM 19 N4 C B1581 22.238 -47.858 2.657 1.00 39.83 N
ATOM 20 C5 C B1581 21.381 -48.841 4.627 1.00 40.76 C
ATOM 21 C6 C B1581 20.291 -49.073 5.366 1.00 40.52 C
ATOM 22 P A B1582 16.668 -53.682 5.570 1.00 54.99 P
ATOM 23 OP1 A B1582 15.397 -54.379 5.908 1.00 65.26 O
ATOM 24 OP2 A B1582 17.940 -54.398 5.808 1.00 60.80 O
ATOM 25 O5' A B1582 16.620 -53.139 4.068 1.00 44.05 O
TER

Atoms:
OP1: (15.397,-54.379,5.908)
OP2: (17.940,-54.398,5.808)
C3': (16.253,-52.883,1.038)
C1': (17.181,-50.743,1.189)
C5': (15.383,-52.889,3.425)
O4': (16.439,-51.006,2.368)
C8: (19.179,-51.435,2.603)
O2': (15.681,-51.218,-0.594)
C6: (22.086,-50.412,0.866)
C5: (20.842,-50.755,1.429)
C4: (19.694,-50.423,0.743)
P: (16.668,-53.682,5.570)
C4': (15.567,-52.135,2.146)
C2': (16.748,-51.766,0.147)
C2: (20.894,-49.541,-0.867)
N1: (22.075,-49.785,-0.322)
N3: (19.666,-49.804,-0.430)
N6: (23.270,-50.688,1.431)
N7: (20.498,-51.402,2.604)
N9: (18.620,-50.856,1.499)
O5': (16.620,-53.139,4.068)
O3': (15.415,-53.793,0.388)
C2: (18.905,-47.914,3.818)
OP1: (20.377,-54.527,9.685)
OP2: (21.843,-53.048,8.215)
C4: (21.202,-48.109,3.437)
O5': (19.427,-52.485,8.577)
C3': (17.642,-51.305,6.160)
C1': (17.911,-48.953,5.906)
O4': (18.437,-49.294,7.159)
C5': (19.560,-51.278,7.862)
P: (20.716,-53.182,9.173)
O2: (17.781,-47.509,3.467)
C4': (18.239,-50.702,7.437)
C2': (17.040,-50.120,5.424)
O2': (15.708,-49.900,5.859)
N1: (19.049,-48.660,4.998)
N3: (20.007,-47.670,3.059)
N4: (22.238,-47.858,2.657)
C6: (20.291,-49.073,5.366)
C5: (21.381,-48.841,4.627)
O3': (16.701,-52.324,6.439)
Image (generated by PyMOL):
PyMOL image
show in jmol