Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A225:A224
Extra
PDB:
ATOM 1 O3' C A 224 -85.795 -54.588 79.415 1.00 0.01 O
ATOM 2 P A A 225 -87.373 -54.498 79.489 1.00 0.01 P
ATOM 3 OP1 A A 225 -87.902 -55.306 78.374 1.00 0.01 O
ATOM 4 OP2 A A 225 -87.726 -53.060 79.571 1.00 0.01 O
ATOM 5 O5' A A 225 -87.701 -55.221 80.854 1.00 0.01 O
ATOM 6 C5' A A 225 -87.429 -56.598 81.007 1.00 0.01 C
ATOM 7 C4' A A 225 -87.861 -57.090 82.350 1.00 0.01 C
ATOM 8 O4' A A 225 -87.162 -56.367 83.387 1.00 0.01 O
ATOM 9 C3' A A 225 -89.335 -56.924 82.664 1.00 0.01 C
ATOM 10 O3' A A 225 -90.091 -58.018 82.164 1.00 0.01 O
ATOM 11 C2' A A 225 -89.351 -56.830 84.177 1.00 0.01 C
ATOM 12 O2' A A 225 -89.325 -58.132 84.736 1.00 0.01 O
ATOM 13 C1' A A 225 -88.011 -56.145 84.480 1.00 0.01 C
ATOM 14 N9 A A 225 -88.123 -54.687 84.666 1.00 0.01 N
ATOM 15 C8 A A 225 -87.879 -53.793 83.658 1.00 0.01 C
ATOM 16 N7 A A 225 -87.955 -52.529 83.991 1.00 0.01 N
ATOM 17 C5 A A 225 -88.240 -52.594 85.326 1.00 0.01 C
ATOM 18 C6 A A 225 -88.440 -51.547 86.221 1.00 0.01 C
ATOM 19 N6 A A 225 -88.359 -50.278 85.790 1.00 0.01 N
ATOM 20 N1 A A 225 -88.698 -51.866 87.510 1.00 0.01 N
ATOM 21 C2 A A 225 -88.746 -53.163 87.810 1.00 0.01 C
ATOM 22 N3 A A 225 -88.583 -54.250 87.043 1.00 0.01 N
ATOM 23 C4 A A 225 -88.324 -53.901 85.780 1.00 0.01 C
ATOM 24 P A A 226 -91.691 -58.001 82.184 1.00 0.01 P
ATOM 25 OP1 A A 226 -92.149 -59.397 81.987 1.00 0.01 O
ATOM 26 OP2 A A 226 -92.143 -56.951 81.241 1.00 0.01 O
ATOM 27 O5' A A 226 -91.988 -57.547 83.643 1.00 0.01 O
TER
ATOM 1 O3' U B 223 -80.513 -50.375 79.533 1.00 0.23 O
ATOM 2 P C B 224 -82.090 -50.270 79.321 1.00 0.01 P
ATOM 3 OP1 C B 224 -82.330 -49.523 78.052 1.00 0.01 O
ATOM 4 OP2 C B 224 -82.656 -49.737 80.598 1.00 0.01 O
ATOM 5 O5' C B 224 -82.510 -51.779 79.152 1.00 0.01 O
ATOM 6 C5' C B 224 -83.773 -52.208 79.573 1.00 0.01 C
ATOM 7 C4' C B 224 -83.716 -53.602 80.077 1.00 0.01 C
ATOM 8 O4' C B 224 -82.914 -53.658 81.274 1.00 0.01 O
ATOM 9 C3' C B 224 -85.027 -54.173 80.502 1.00 0.01 C
ATOM 10 O3' C B 224 -85.795 -54.588 79.415 1.00 0.01 O
ATOM 11 C2' C B 224 -84.612 -55.291 81.452 1.00 0.01 C
ATOM 12 O2' C B 224 -84.146 -56.432 80.750 1.00 0.01 O
ATOM 13 C1' C B 224 -83.430 -54.648 82.148 1.00 0.01 C
ATOM 14 N1 C B 224 -83.831 -54.009 83.410 1.00 0.01 N
ATOM 15 C2 C B 224 -84.213 -54.862 84.427 1.00 0.01 C
ATOM 16 O2 C B 224 -84.176 -56.061 84.172 1.00 0.01 O
ATOM 17 N3 C B 224 -84.603 -54.328 85.613 1.00 0.01 N
ATOM 18 C4 C B 224 -84.616 -52.995 85.784 1.00 0.01 C
ATOM 19 N4 C B 224 -84.989 -52.491 86.962 1.00 0.01 N
ATOM 20 C5 C B 224 -84.236 -52.106 84.749 1.00 0.01 C
ATOM 21 C6 C B 224 -83.855 -52.644 83.587 1.00 0.01 C
ATOM 22 P A B 225 -87.373 -54.498 79.489 1.00 0.01 P
ATOM 23 OP1 A B 225 -87.902 -55.306 78.374 1.00 0.01 O
ATOM 24 OP2 A B 225 -87.726 -53.060 79.571 1.00 0.01 O
ATOM 25 O5' A B 225 -87.701 -55.221 80.854 1.00 0.01 O
TER
ATOM 2 P A A 225 -87.373 -54.498 79.489 1.00 0.01 P
ATOM 3 OP1 A A 225 -87.902 -55.306 78.374 1.00 0.01 O
ATOM 4 OP2 A A 225 -87.726 -53.060 79.571 1.00 0.01 O
ATOM 5 O5' A A 225 -87.701 -55.221 80.854 1.00 0.01 O
ATOM 6 C5' A A 225 -87.429 -56.598 81.007 1.00 0.01 C
ATOM 7 C4' A A 225 -87.861 -57.090 82.350 1.00 0.01 C
ATOM 8 O4' A A 225 -87.162 -56.367 83.387 1.00 0.01 O
ATOM 9 C3' A A 225 -89.335 -56.924 82.664 1.00 0.01 C
ATOM 10 O3' A A 225 -90.091 -58.018 82.164 1.00 0.01 O
ATOM 11 C2' A A 225 -89.351 -56.830 84.177 1.00 0.01 C
ATOM 12 O2' A A 225 -89.325 -58.132 84.736 1.00 0.01 O
ATOM 13 C1' A A 225 -88.011 -56.145 84.480 1.00 0.01 C
ATOM 14 N9 A A 225 -88.123 -54.687 84.666 1.00 0.01 N
ATOM 15 C8 A A 225 -87.879 -53.793 83.658 1.00 0.01 C
ATOM 16 N7 A A 225 -87.955 -52.529 83.991 1.00 0.01 N
ATOM 17 C5 A A 225 -88.240 -52.594 85.326 1.00 0.01 C
ATOM 18 C6 A A 225 -88.440 -51.547 86.221 1.00 0.01 C
ATOM 19 N6 A A 225 -88.359 -50.278 85.790 1.00 0.01 N
ATOM 20 N1 A A 225 -88.698 -51.866 87.510 1.00 0.01 N
ATOM 21 C2 A A 225 -88.746 -53.163 87.810 1.00 0.01 C
ATOM 22 N3 A A 225 -88.583 -54.250 87.043 1.00 0.01 N
ATOM 23 C4 A A 225 -88.324 -53.901 85.780 1.00 0.01 C
ATOM 24 P A A 226 -91.691 -58.001 82.184 1.00 0.01 P
ATOM 25 OP1 A A 226 -92.149 -59.397 81.987 1.00 0.01 O
ATOM 26 OP2 A A 226 -92.143 -56.951 81.241 1.00 0.01 O
ATOM 27 O5' A A 226 -91.988 -57.547 83.643 1.00 0.01 O
TER
ATOM 1 O3' U B 223 -80.513 -50.375 79.533 1.00 0.23 O
ATOM 2 P C B 224 -82.090 -50.270 79.321 1.00 0.01 P
ATOM 3 OP1 C B 224 -82.330 -49.523 78.052 1.00 0.01 O
ATOM 4 OP2 C B 224 -82.656 -49.737 80.598 1.00 0.01 O
ATOM 5 O5' C B 224 -82.510 -51.779 79.152 1.00 0.01 O
ATOM 6 C5' C B 224 -83.773 -52.208 79.573 1.00 0.01 C
ATOM 7 C4' C B 224 -83.716 -53.602 80.077 1.00 0.01 C
ATOM 8 O4' C B 224 -82.914 -53.658 81.274 1.00 0.01 O
ATOM 9 C3' C B 224 -85.027 -54.173 80.502 1.00 0.01 C
ATOM 10 O3' C B 224 -85.795 -54.588 79.415 1.00 0.01 O
ATOM 11 C2' C B 224 -84.612 -55.291 81.452 1.00 0.01 C
ATOM 12 O2' C B 224 -84.146 -56.432 80.750 1.00 0.01 O
ATOM 13 C1' C B 224 -83.430 -54.648 82.148 1.00 0.01 C
ATOM 14 N1 C B 224 -83.831 -54.009 83.410 1.00 0.01 N
ATOM 15 C2 C B 224 -84.213 -54.862 84.427 1.00 0.01 C
ATOM 16 O2 C B 224 -84.176 -56.061 84.172 1.00 0.01 O
ATOM 17 N3 C B 224 -84.603 -54.328 85.613 1.00 0.01 N
ATOM 18 C4 C B 224 -84.616 -52.995 85.784 1.00 0.01 C
ATOM 19 N4 C B 224 -84.989 -52.491 86.962 1.00 0.01 N
ATOM 20 C5 C B 224 -84.236 -52.106 84.749 1.00 0.01 C
ATOM 21 C6 C B 224 -83.855 -52.644 83.587 1.00 0.01 C
ATOM 22 P A B 225 -87.373 -54.498 79.489 1.00 0.01 P
ATOM 23 OP1 A B 225 -87.902 -55.306 78.374 1.00 0.01 O
ATOM 24 OP2 A B 225 -87.726 -53.060 79.571 1.00 0.01 O
ATOM 25 O5' A B 225 -87.701 -55.221 80.854 1.00 0.01 O
TER
Atoms:
OP1: (-87.902,-55.306,78.374)
OP2: (-87.726,-53.060,79.571)
C3': (-89.335,-56.924,82.664)
C1': (-88.011,-56.145,84.480)
C5': (-87.429,-56.598,81.007)
O4': (-87.162,-56.367,83.387)
C8: (-87.879,-53.793,83.658)
O2': (-89.325,-58.132,84.736)
C6: (-88.440,-51.547,86.221)
C5: (-88.240,-52.594,85.326)
C4: (-88.324,-53.901,85.780)
P: (-87.373,-54.498,79.489)
C4': (-87.861,-57.090,82.350)
C2': (-89.351,-56.830,84.177)
C2: (-88.746,-53.163,87.810)
N1: (-88.698,-51.866,87.510)
N3: (-88.583,-54.250,87.043)
N6: (-88.359,-50.278,85.790)
N7: (-87.955,-52.529,83.991)
N9: (-88.123,-54.687,84.666)
O5': (-87.701,-55.221,80.854)
O3': (-90.091,-58.018,82.164)
OP2: (-87.726,-53.060,79.571)
C3': (-89.335,-56.924,82.664)
C1': (-88.011,-56.145,84.480)
C5': (-87.429,-56.598,81.007)
O4': (-87.162,-56.367,83.387)
C8: (-87.879,-53.793,83.658)
O2': (-89.325,-58.132,84.736)
C6: (-88.440,-51.547,86.221)
C5: (-88.240,-52.594,85.326)
C4: (-88.324,-53.901,85.780)
P: (-87.373,-54.498,79.489)
C4': (-87.861,-57.090,82.350)
C2': (-89.351,-56.830,84.177)
C2: (-88.746,-53.163,87.810)
N1: (-88.698,-51.866,87.510)
N3: (-88.583,-54.250,87.043)
N6: (-88.359,-50.278,85.790)
N7: (-87.955,-52.529,83.991)
N9: (-88.123,-54.687,84.666)
O5': (-87.701,-55.221,80.854)
O3': (-90.091,-58.018,82.164)
C2: (-84.213,-54.862,84.427)
OP1: (-82.330,-49.523,78.052)
OP2: (-82.656,-49.737,80.598)
C4: (-84.616,-52.995,85.784)
O5': (-82.510,-51.779,79.152)
C3': (-85.027,-54.173,80.502)
C1': (-83.430,-54.648,82.148)
O4': (-82.914,-53.658,81.274)
C5': (-83.773,-52.208,79.573)
P: (-82.090,-50.270,79.321)
O2: (-84.176,-56.061,84.172)
C4': (-83.716,-53.602,80.077)
C2': (-84.612,-55.291,81.452)
O2': (-84.146,-56.432,80.750)
N1: (-83.831,-54.009,83.410)
N3: (-84.603,-54.328,85.613)
N4: (-84.989,-52.491,86.962)
C6: (-83.855,-52.644,83.587)
C5: (-84.236,-52.106,84.749)
O3': (-85.795,-54.588,79.415)
OP1: (-82.330,-49.523,78.052)
OP2: (-82.656,-49.737,80.598)
C4: (-84.616,-52.995,85.784)
O5': (-82.510,-51.779,79.152)
C3': (-85.027,-54.173,80.502)
C1': (-83.430,-54.648,82.148)
O4': (-82.914,-53.658,81.274)
C5': (-83.773,-52.208,79.573)
P: (-82.090,-50.270,79.321)
O2: (-84.176,-56.061,84.172)
C4': (-83.716,-53.602,80.077)
C2': (-84.612,-55.291,81.452)
O2': (-84.146,-56.432,80.750)
N1: (-83.831,-54.009,83.410)
N3: (-84.603,-54.328,85.613)
N4: (-84.989,-52.491,86.962)
C6: (-83.855,-52.644,83.587)
C5: (-84.236,-52.106,84.749)
O3': (-85.795,-54.588,79.415)
Image (generated by PyMOL):