Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02008:02007
Extra
PDB:
ATOM 1 O3' C A2007 32.135 131.194 98.254 1.00 34.80 O
ATOM 2 P A A2008 32.428 132.630 98.901 1.00 36.97 P
ATOM 3 OP1 A A2008 31.141 133.057 99.500 1.00 37.68 O
ATOM 4 OP2 A A2008 33.102 133.502 97.905 1.00 35.47 O
ATOM 5 O5' A A2008 33.469 132.329 100.066 1.00 36.54 O
ATOM 6 C5' A A2008 33.158 131.404 101.118 1.00 34.51 C
ATOM 7 C4' A A2008 34.357 131.223 102.006 1.00 33.83 C
ATOM 8 O4' A A2008 35.431 130.609 101.252 1.00 33.40 O
ATOM 9 C3' A A2008 34.943 132.522 102.528 1.00 33.32 C
ATOM 10 O3' A A2008 34.233 132.915 103.699 1.00 32.44 O
ATOM 11 C2' A A2008 36.394 132.144 102.801 1.00 34.12 C
ATOM 12 O2' A A2008 36.577 131.490 104.039 1.00 35.91 O
ATOM 13 C1' A A2008 36.673 131.150 101.667 1.00 33.75 C
ATOM 14 N9 A A2008 37.335 131.740 100.501 1.00 34.13 N
ATOM 15 C8 A A2008 36.760 132.373 99.423 1.00 33.40 C
ATOM 16 N7 A A2008 37.624 132.808 98.543 1.00 31.70 N
ATOM 17 C5 A A2008 38.854 132.437 99.072 1.00 32.05 C
ATOM 18 C6 A A2008 40.175 132.622 98.620 1.00 31.49 C
ATOM 19 N6 A A2008 40.491 133.262 97.492 1.00 28.92 N
ATOM 20 N1 A A2008 41.174 132.126 99.384 1.00 31.58 N
ATOM 21 C2 A A2008 40.859 131.498 100.522 1.00 31.71 C
ATOM 22 N3 A A2008 39.664 131.269 101.055 1.00 33.02 N
ATOM 23 C4 A A2008 38.691 131.771 100.273 1.00 32.94 C
ATOM 24 P U A2009 34.348 134.419 104.250 1.00 34.54 P
ATOM 25 OP1 U A2009 33.002 134.803 104.755 1.00 34.40 O
ATOM 26 OP2 U A2009 35.016 135.264 103.221 1.00 32.94 O
ATOM 27 O5' U A2009 35.309 134.281 105.513 1.00 34.38 O
TER
ATOM 1 O3' A B2006 34.258 130.326 92.504 1.00 33.62 O
ATOM 2 P C B2007 34.201 131.626 93.447 1.00 33.02 P
ATOM 3 OP1 C B2007 33.032 132.426 93.019 1.00 33.11 O
ATOM 4 OP2 C B2007 35.543 132.249 93.500 1.00 32.75 O
ATOM 5 O5' C B2007 33.887 131.056 94.893 1.00 32.83 O
ATOM 6 C5' C B2007 32.639 130.432 95.175 1.00 31.65 C
ATOM 7 C4' C B2007 32.725 129.666 96.466 1.00 33.10 C
ATOM 8 O4' C B2007 33.716 128.612 96.345 1.00 32.67 O
ATOM 9 C3' C B2007 33.191 130.450 97.683 1.00 32.09 C
ATOM 10 O3' C B2007 32.135 131.194 98.254 1.00 34.80 O
ATOM 11 C2' C B2007 33.623 129.324 98.602 1.00 32.86 C
ATOM 12 O2' C B2007 32.503 128.647 99.143 1.00 31.63 O
ATOM 13 C1' C B2007 34.333 128.404 97.607 1.00 33.16 C
ATOM 14 N1 C B2007 35.764 128.748 97.503 1.00 32.32 N
ATOM 15 C2 C B2007 36.649 128.217 98.448 1.00 31.40 C
ATOM 16 O2 C B2007 36.208 127.445 99.310 1.00 31.80 O
ATOM 17 N3 C B2007 37.959 128.558 98.396 1.00 30.70 N
ATOM 18 C4 C B2007 38.394 129.389 97.443 1.00 31.22 C
ATOM 19 N4 C B2007 39.690 129.708 97.428 1.00 27.92 N
ATOM 20 C5 C B2007 37.518 129.933 96.461 1.00 31.30 C
ATOM 21 C6 C B2007 36.224 129.586 96.525 1.00 31.32 C
ATOM 22 P A B2008 32.428 132.630 98.901 1.00 36.97 P
ATOM 23 OP1 A B2008 31.141 133.057 99.500 1.00 37.68 O
ATOM 24 OP2 A B2008 33.102 133.502 97.905 1.00 35.47 O
ATOM 25 O5' A B2008 33.469 132.329 100.066 1.00 36.54 O
TER
ATOM 2 P A A2008 32.428 132.630 98.901 1.00 36.97 P
ATOM 3 OP1 A A2008 31.141 133.057 99.500 1.00 37.68 O
ATOM 4 OP2 A A2008 33.102 133.502 97.905 1.00 35.47 O
ATOM 5 O5' A A2008 33.469 132.329 100.066 1.00 36.54 O
ATOM 6 C5' A A2008 33.158 131.404 101.118 1.00 34.51 C
ATOM 7 C4' A A2008 34.357 131.223 102.006 1.00 33.83 C
ATOM 8 O4' A A2008 35.431 130.609 101.252 1.00 33.40 O
ATOM 9 C3' A A2008 34.943 132.522 102.528 1.00 33.32 C
ATOM 10 O3' A A2008 34.233 132.915 103.699 1.00 32.44 O
ATOM 11 C2' A A2008 36.394 132.144 102.801 1.00 34.12 C
ATOM 12 O2' A A2008 36.577 131.490 104.039 1.00 35.91 O
ATOM 13 C1' A A2008 36.673 131.150 101.667 1.00 33.75 C
ATOM 14 N9 A A2008 37.335 131.740 100.501 1.00 34.13 N
ATOM 15 C8 A A2008 36.760 132.373 99.423 1.00 33.40 C
ATOM 16 N7 A A2008 37.624 132.808 98.543 1.00 31.70 N
ATOM 17 C5 A A2008 38.854 132.437 99.072 1.00 32.05 C
ATOM 18 C6 A A2008 40.175 132.622 98.620 1.00 31.49 C
ATOM 19 N6 A A2008 40.491 133.262 97.492 1.00 28.92 N
ATOM 20 N1 A A2008 41.174 132.126 99.384 1.00 31.58 N
ATOM 21 C2 A A2008 40.859 131.498 100.522 1.00 31.71 C
ATOM 22 N3 A A2008 39.664 131.269 101.055 1.00 33.02 N
ATOM 23 C4 A A2008 38.691 131.771 100.273 1.00 32.94 C
ATOM 24 P U A2009 34.348 134.419 104.250 1.00 34.54 P
ATOM 25 OP1 U A2009 33.002 134.803 104.755 1.00 34.40 O
ATOM 26 OP2 U A2009 35.016 135.264 103.221 1.00 32.94 O
ATOM 27 O5' U A2009 35.309 134.281 105.513 1.00 34.38 O
TER
ATOM 1 O3' A B2006 34.258 130.326 92.504 1.00 33.62 O
ATOM 2 P C B2007 34.201 131.626 93.447 1.00 33.02 P
ATOM 3 OP1 C B2007 33.032 132.426 93.019 1.00 33.11 O
ATOM 4 OP2 C B2007 35.543 132.249 93.500 1.00 32.75 O
ATOM 5 O5' C B2007 33.887 131.056 94.893 1.00 32.83 O
ATOM 6 C5' C B2007 32.639 130.432 95.175 1.00 31.65 C
ATOM 7 C4' C B2007 32.725 129.666 96.466 1.00 33.10 C
ATOM 8 O4' C B2007 33.716 128.612 96.345 1.00 32.67 O
ATOM 9 C3' C B2007 33.191 130.450 97.683 1.00 32.09 C
ATOM 10 O3' C B2007 32.135 131.194 98.254 1.00 34.80 O
ATOM 11 C2' C B2007 33.623 129.324 98.602 1.00 32.86 C
ATOM 12 O2' C B2007 32.503 128.647 99.143 1.00 31.63 O
ATOM 13 C1' C B2007 34.333 128.404 97.607 1.00 33.16 C
ATOM 14 N1 C B2007 35.764 128.748 97.503 1.00 32.32 N
ATOM 15 C2 C B2007 36.649 128.217 98.448 1.00 31.40 C
ATOM 16 O2 C B2007 36.208 127.445 99.310 1.00 31.80 O
ATOM 17 N3 C B2007 37.959 128.558 98.396 1.00 30.70 N
ATOM 18 C4 C B2007 38.394 129.389 97.443 1.00 31.22 C
ATOM 19 N4 C B2007 39.690 129.708 97.428 1.00 27.92 N
ATOM 20 C5 C B2007 37.518 129.933 96.461 1.00 31.30 C
ATOM 21 C6 C B2007 36.224 129.586 96.525 1.00 31.32 C
ATOM 22 P A B2008 32.428 132.630 98.901 1.00 36.97 P
ATOM 23 OP1 A B2008 31.141 133.057 99.500 1.00 37.68 O
ATOM 24 OP2 A B2008 33.102 133.502 97.905 1.00 35.47 O
ATOM 25 O5' A B2008 33.469 132.329 100.066 1.00 36.54 O
TER
Atoms:
OP1: (31.141,133.057,99.500)
OP2: (33.102,133.502,97.905)
C3': (34.943,132.522,102.528)
C1': (36.673,131.150,101.667)
C5': (33.158,131.404,101.118)
O4': (35.431,130.609,101.252)
C8: (36.760,132.373,99.423)
O2': (36.577,131.490,104.039)
C6: (40.175,132.622,98.620)
C5: (38.854,132.437,99.072)
C4: (38.691,131.771,100.273)
P: (32.428,132.630,98.901)
C4': (34.357,131.223,102.006)
C2': (36.394,132.144,102.801)
C2: (40.859,131.498,100.522)
N1: (41.174,132.126,99.384)
N3: (39.664,131.269,101.055)
N6: (40.491,133.262,97.492)
N7: (37.624,132.808,98.543)
N9: (37.335,131.740,100.501)
O5': (33.469,132.329,100.066)
O3': (34.233,132.915,103.699)
OP2: (33.102,133.502,97.905)
C3': (34.943,132.522,102.528)
C1': (36.673,131.150,101.667)
C5': (33.158,131.404,101.118)
O4': (35.431,130.609,101.252)
C8: (36.760,132.373,99.423)
O2': (36.577,131.490,104.039)
C6: (40.175,132.622,98.620)
C5: (38.854,132.437,99.072)
C4: (38.691,131.771,100.273)
P: (32.428,132.630,98.901)
C4': (34.357,131.223,102.006)
C2': (36.394,132.144,102.801)
C2: (40.859,131.498,100.522)
N1: (41.174,132.126,99.384)
N3: (39.664,131.269,101.055)
N6: (40.491,133.262,97.492)
N7: (37.624,132.808,98.543)
N9: (37.335,131.740,100.501)
O5': (33.469,132.329,100.066)
O3': (34.233,132.915,103.699)
C2: (36.649,128.217,98.448)
OP1: (33.032,132.426,93.019)
OP2: (35.543,132.249,93.500)
C4: (38.394,129.389,97.443)
O5': (33.887,131.056,94.893)
C3': (33.191,130.450,97.683)
C1': (34.333,128.404,97.607)
O4': (33.716,128.612,96.345)
C5': (32.639,130.432,95.175)
P: (34.201,131.626,93.447)
O2: (36.208,127.445,99.310)
C4': (32.725,129.666,96.466)
C2': (33.623,129.324,98.602)
O2': (32.503,128.647,99.143)
N1: (35.764,128.748,97.503)
N3: (37.959,128.558,98.396)
N4: (39.690,129.708,97.428)
C6: (36.224,129.586,96.525)
C5: (37.518,129.933,96.461)
O3': (32.135,131.194,98.254)
OP1: (33.032,132.426,93.019)
OP2: (35.543,132.249,93.500)
C4: (38.394,129.389,97.443)
O5': (33.887,131.056,94.893)
C3': (33.191,130.450,97.683)
C1': (34.333,128.404,97.607)
O4': (33.716,128.612,96.345)
C5': (32.639,130.432,95.175)
P: (34.201,131.626,93.447)
O2: (36.208,127.445,99.310)
C4': (32.725,129.666,96.466)
C2': (33.623,129.324,98.602)
O2': (32.503,128.647,99.143)
N1: (35.764,128.748,97.503)
N3: (37.959,128.558,98.396)
N4: (39.690,129.708,97.428)
C6: (36.224,129.586,96.525)
C5: (37.518,129.933,96.461)
O3': (32.135,131.194,98.254)
Image (generated by PyMOL):