ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1FJG:A114:A582

Extra

PDB:
ATOM 1 O3' U A 113 122.590 87.586 -10.095 1.00 43.80 O
ATOM 2 P G A 114 121.076 87.108 -9.810 1.00 40.61 P
ATOM 3 OP1 G A 114 120.467 88.161 -8.948 1.00 48.12 O
ATOM 4 OP2 G A 114 121.069 85.699 -9.352 1.00 48.12 O
ATOM 5 O5' G A 114 120.386 87.156 -11.246 1.00 40.61 O
ATOM 6 C5' G A 114 120.339 88.388 -11.963 1.00 40.61 C
ATOM 7 C4' G A 114 120.034 88.151 -13.412 1.00 40.61 C
ATOM 8 O4' G A 114 121.090 87.394 -14.057 1.00 40.61 O
ATOM 9 C3' G A 114 118.785 87.365 -13.724 1.00 40.61 C
ATOM 10 O3' G A 114 117.647 88.190 -13.643 1.00 40.61 O
ATOM 11 C2' G A 114 119.040 86.909 -15.155 1.00 40.61 C
ATOM 12 O2' G A 114 118.760 87.951 -16.062 1.00 40.61 O
ATOM 13 C1' G A 114 120.550 86.670 -15.152 1.00 40.61 C
ATOM 14 N9 G A 114 120.917 85.264 -15.020 1.00 48.12 N
ATOM 15 C8 G A 114 121.288 84.617 -13.870 1.00 48.12 C
ATOM 16 N7 G A 114 121.570 83.357 -14.060 1.00 48.12 N
ATOM 17 C5 G A 114 121.366 83.155 -15.417 1.00 48.12 C
ATOM 18 C6 G A 114 121.509 81.975 -16.207 1.00 48.12 C
ATOM 19 O6 G A 114 121.839 80.830 -15.846 1.00 48.12 O
ATOM 20 N1 G A 114 121.224 82.219 -17.543 1.00 48.12 N
ATOM 21 C2 G A 114 120.855 83.427 -18.058 1.00 48.12 C
ATOM 22 N2 G A 114 120.675 83.455 -19.377 1.00 48.12 N
ATOM 23 N3 G A 114 120.689 84.530 -17.332 1.00 48.12 N
ATOM 24 C4 G A 114 120.965 84.321 -16.028 1.00 48.12 C
ATOM 25 P G A 115 116.186 87.525 -13.616 1.00 50.01 P
ATOM 26 OP1 G A 115 115.273 88.655 -13.315 1.00 41.24 O
ATOM 27 OP2 G A 115 116.183 86.329 -12.732 1.00 41.24 O
ATOM 28 O5' G A 115 115.970 87.036 -15.121 1.00 50.01 O
TER

ATOM 1 O3' U B 581 108.922 96.120 -7.559 1.00 60.60 O
ATOM 2 P G B 582 109.875 95.438 -6.458 1.00 58.89 P
ATOM 3 OP1 G B 582 109.020 94.878 -5.384 1.00 62.18 O
ATOM 4 OP2 G B 582 110.957 96.390 -6.096 1.00 62.18 O
ATOM 5 O5' G B 582 110.506 94.216 -7.259 1.00 58.89 O
ATOM 6 C5' G B 582 109.655 93.183 -7.784 1.00 58.89 C
ATOM 7 C4' G B 582 110.470 92.120 -8.473 1.00 58.89 C
ATOM 8 O4' G B 582 110.979 92.618 -9.736 1.00 58.89 O
ATOM 9 C3' G B 582 111.706 91.647 -7.740 1.00 58.89 C
ATOM 10 O3' G B 582 111.431 90.681 -6.759 1.00 58.89 O
ATOM 11 C2' G B 582 112.528 91.056 -8.865 1.00 58.89 C
ATOM 12 O2' G B 582 112.036 89.788 -9.222 1.00 58.89 O
ATOM 13 C1' G B 582 112.244 92.033 -10.001 1.00 58.89 C
ATOM 14 N9 G B 582 113.269 93.079 -10.033 1.00 62.18 N
ATOM 15 C8 G B 582 113.208 94.334 -9.471 1.00 62.18 C
ATOM 16 N7 G B 582 114.309 95.019 -9.628 1.00 62.18 N
ATOM 17 C5 G B 582 115.148 94.173 -10.346 1.00 62.18 C
ATOM 18 C6 G B 582 116.483 94.359 -10.802 1.00 62.18 C
ATOM 19 O6 G B 582 117.217 95.337 -10.660 1.00 62.18 O
ATOM 20 N1 G B 582 116.951 93.245 -11.483 1.00 62.18 N
ATOM 21 C2 G B 582 116.240 92.100 -11.699 1.00 62.18 C
ATOM 22 N2 G B 582 116.860 91.145 -12.387 1.00 62.18 N
ATOM 23 N3 G B 582 115.006 91.904 -11.275 1.00 62.18 N
ATOM 24 C4 G B 582 114.522 92.976 -10.612 1.00 62.18 C
ATOM 25 P U B 583 112.388 90.575 -5.473 1.00 52.11 P
ATOM 26 OP1 U B 583 111.837 89.487 -4.641 1.00 66.52 O
ATOM 27 OP2 U B 583 112.622 91.912 -4.877 1.00 66.52 O
ATOM 28 O5' U B 583 113.779 90.080 -6.053 1.00 52.11 O
TER

Atoms:
OP1: (120.467,88.161,-8.948)
OP2: (121.069,85.699,-9.352)
C3': (118.785,87.365,-13.724)
C1': (120.550,86.670,-15.152)
C5': (120.339,88.388,-11.963)
O6: (121.839,80.830,-15.846)
O4': (121.090,87.394,-14.057)
C8: (121.288,84.617,-13.870)
C2: (120.855,83.427,-18.058)
C6: (121.509,81.975,-16.207)
C5: (121.366,83.155,-15.417)
C4: (120.965,84.321,-16.028)
P: (121.076,87.108,-9.810)
C4': (120.034,88.151,-13.412)
C2': (119.040,86.909,-15.155)
O2': (118.760,87.951,-16.062)
N1: (121.224,82.219,-17.543)
N2: (120.675,83.455,-19.377)
N3: (120.689,84.530,-17.332)
N7: (121.570,83.357,-14.060)
N9: (120.917,85.264,-15.020)
O5': (120.386,87.156,-11.246)
O3': (117.647,88.190,-13.643)
OP1: (109.020,94.878,-5.384)
OP2: (110.957,96.390,-6.096)
C3': (111.706,91.647,-7.740)
C1': (112.244,92.033,-10.001)
C5': (109.655,93.183,-7.784)
O6: (117.217,95.337,-10.660)
O4': (110.979,92.618,-9.736)
C8: (113.208,94.334,-9.471)
C2: (116.240,92.100,-11.699)
C6: (116.483,94.359,-10.802)
C5: (115.148,94.173,-10.346)
C4: (114.522,92.976,-10.612)
P: (109.875,95.438,-6.458)
C4': (110.470,92.120,-8.473)
C2': (112.528,91.056,-8.865)
O2': (112.036,89.788,-9.222)
N1: (116.951,93.245,-11.483)
N2: (116.860,91.145,-12.387)
N3: (115.006,91.904,-11.275)
N7: (114.309,95.019,-9.628)
N9: (113.269,93.079,-10.033)
O5': (110.506,94.216,-7.259)
O3': (111.431,90.681,-6.759)
Image (generated by PyMOL):
PyMOL image
show in jmol