ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1N32:A114:A582

Extra

PDB:
ATOM 1 O3' U A 113 121.572 87.057 -10.827 1.00 36.49 O
ATOM 2 P G A 114 120.073 86.560 -10.580 1.00 43.46 P
ATOM 3 OP1 G A 114 119.442 87.627 -9.770 1.00 46.43 O
ATOM 4 OP2 G A 114 120.081 85.166 -10.075 1.00 46.43 O
ATOM 5 O5' G A 114 119.434 86.565 -12.035 1.00 36.29 O
ATOM 6 C5' G A 114 119.288 87.793 -12.740 1.00 36.29 C
ATOM 7 C4' G A 114 118.936 87.540 -14.173 1.00 36.29 C
ATOM 8 O4' G A 114 119.985 86.776 -14.813 1.00 36.29 O
ATOM 9 C3' G A 114 117.678 86.736 -14.432 1.00 36.29 C
ATOM 10 O3' G A 114 116.512 87.556 -14.320 1.00 36.29 O
ATOM 11 C2' G A 114 117.916 86.222 -15.850 1.00 36.29 C
ATOM 12 O2' G A 114 117.636 87.199 -16.836 1.00 36.29 O
ATOM 13 C1' G A 114 119.428 85.990 -15.853 1.00 36.29 C
ATOM 14 N9 G A 114 119.822 84.592 -15.679 1.00 34.88 N
ATOM 15 C8 G A 114 120.191 83.960 -14.514 1.00 34.88 C
ATOM 16 N7 G A 114 120.505 82.701 -14.691 1.00 34.88 N
ATOM 17 C5 G A 114 120.335 82.487 -16.050 1.00 34.88 C
ATOM 18 C6 G A 114 120.538 81.320 -16.826 1.00 34.88 C
ATOM 19 O6 G A 114 120.950 80.210 -16.454 1.00 34.88 O
ATOM 20 N1 G A 114 120.224 81.536 -18.166 1.00 34.88 N
ATOM 21 C2 G A 114 119.789 82.730 -18.688 1.00 34.88 C
ATOM 22 N2 G A 114 119.531 82.753 -19.994 1.00 34.88 N
ATOM 23 N3 G A 114 119.617 83.828 -17.978 1.00 34.88 N
ATOM 24 C4 G A 114 119.904 83.638 -16.676 1.00 34.88 C
ATOM 25 P G A 115 115.055 86.869 -14.237 1.00 42.97 P
ATOM 26 OP1 G A 115 114.081 87.935 -13.905 1.00 45.76 O
ATOM 27 OP2 G A 115 115.137 85.660 -13.377 1.00 45.76 O
ATOM 28 O5' G A 115 114.792 86.406 -15.739 1.00 34.56 O
TER

ATOM 1 O3' U B 581 107.974 95.404 -8.046 1.00 32.24 O
ATOM 2 P G B 582 108.957 94.701 -6.992 1.00 54.46 P
ATOM 3 OP1 G B 582 108.103 94.194 -5.882 1.00 58.59 O
ATOM 4 OP2 G B 582 110.072 95.635 -6.691 1.00 58.59 O
ATOM 5 O5' G B 582 109.541 93.462 -7.806 1.00 45.34 O
ATOM 6 C5' G B 582 108.653 92.445 -8.299 1.00 45.34 C
ATOM 7 C4' G B 582 109.402 91.435 -9.127 1.00 45.34 C
ATOM 8 O4' G B 582 109.857 92.045 -10.360 1.00 45.34 O
ATOM 9 C3' G B 582 110.658 90.854 -8.512 1.00 45.34 C
ATOM 10 O3' G B 582 110.379 89.815 -7.612 1.00 45.34 O
ATOM 11 C2' G B 582 111.435 90.379 -9.731 1.00 45.34 C
ATOM 12 O2' G B 582 111.011 89.129 -10.238 1.00 45.34 O
ATOM 13 C1' G B 582 111.094 91.469 -10.742 1.00 45.34 C
ATOM 14 N9 G B 582 112.105 92.513 -10.716 1.00 47.27 N
ATOM 15 C8 G B 582 112.008 93.753 -10.139 1.00 47.27 C
ATOM 16 N7 G B 582 113.087 94.468 -10.286 1.00 47.27 N
ATOM 17 C5 G B 582 113.946 93.647 -11.001 1.00 47.27 C
ATOM 18 C6 G B 582 115.257 93.874 -11.456 1.00 47.27 C
ATOM 19 O6 G B 582 115.951 94.887 -11.326 1.00 47.27 O
ATOM 20 N1 G B 582 115.759 92.770 -12.130 1.00 47.27 N
ATOM 21 C2 G B 582 115.083 91.602 -12.345 1.00 47.27 C
ATOM 22 N2 G B 582 115.731 90.663 -13.026 1.00 47.27 N
ATOM 23 N3 G B 582 113.861 91.376 -11.926 1.00 47.27 N
ATOM 24 C4 G B 582 113.354 92.435 -11.267 1.00 47.27 C
ATOM 25 P U B 583 111.285 89.666 -6.301 1.00 49.45 P
ATOM 26 OP1 U B 583 110.765 88.503 -5.536 1.00 58.67 O
ATOM 27 OP2 U B 583 111.393 90.998 -5.649 1.00 58.67 O
ATOM 28 O5' U B 583 112.716 89.282 -6.881 1.00 49.67 O
TER

Atoms:
OP1: (119.442,87.627,-9.770)
OP2: (120.081,85.166,-10.075)
C3': (117.678,86.736,-14.432)
C1': (119.428,85.990,-15.853)
C5': (119.288,87.793,-12.740)
O6: (120.950,80.210,-16.454)
O4': (119.985,86.776,-14.813)
C8: (120.191,83.960,-14.514)
C2: (119.789,82.730,-18.688)
C6: (120.538,81.320,-16.826)
C5: (120.335,82.487,-16.050)
C4: (119.904,83.638,-16.676)
P: (120.073,86.560,-10.580)
C4': (118.936,87.540,-14.173)
C2': (117.916,86.222,-15.850)
O2': (117.636,87.199,-16.836)
N1: (120.224,81.536,-18.166)
N2: (119.531,82.753,-19.994)
N3: (119.617,83.828,-17.978)
N7: (120.505,82.701,-14.691)
N9: (119.822,84.592,-15.679)
O5': (119.434,86.565,-12.035)
O3': (116.512,87.556,-14.320)
OP1: (108.103,94.194,-5.882)
OP2: (110.072,95.635,-6.691)
C3': (110.658,90.854,-8.512)
C1': (111.094,91.469,-10.742)
C5': (108.653,92.445,-8.299)
O6: (115.951,94.887,-11.326)
O4': (109.857,92.045,-10.360)
C8: (112.008,93.753,-10.139)
C2: (115.083,91.602,-12.345)
C6: (115.257,93.874,-11.456)
C5: (113.946,93.647,-11.001)
C4: (113.354,92.435,-11.267)
P: (108.957,94.701,-6.992)
C4': (109.402,91.435,-9.127)
C2': (111.435,90.379,-9.731)
O2': (111.011,89.129,-10.238)
N1: (115.759,92.770,-12.130)
N2: (115.731,90.663,-13.026)
N3: (113.861,91.376,-11.926)
N7: (113.087,94.468,-10.286)
N9: (112.105,92.513,-10.716)
O5': (109.541,93.462,-7.806)
O3': (110.379,89.815,-7.612)
Image (generated by PyMOL):
PyMOL image
show in jmol