Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1XMQ:A114:A582
Extra
PDB:
ATOM 1 O3' U A 113 121.607 87.251 -10.892 1.00 39.39 O
ATOM 2 P G A 114 120.095 86.794 -10.607 1.00 38.70 P
ATOM 3 OP1 G A 114 119.542 87.879 -9.764 1.00 34.29 O
ATOM 4 OP2 G A 114 120.054 85.386 -10.111 1.00 34.29 O
ATOM 5 O5' G A 114 119.400 86.817 -12.037 1.00 38.70 O
ATOM 6 C5' G A 114 119.325 88.027 -12.774 1.00 38.70 C
ATOM 7 C4' G A 114 118.933 87.752 -14.198 1.00 38.70 C
ATOM 8 O4' G A 114 119.972 87.012 -14.883 1.00 38.70 O
ATOM 9 C3' G A 114 117.682 86.932 -14.428 1.00 38.70 C
ATOM 10 O3' G A 114 116.515 87.741 -14.272 1.00 38.70 O
ATOM 11 C2' G A 114 117.884 86.453 -15.861 1.00 38.70 C
ATOM 12 O2' G A 114 117.575 87.462 -16.793 1.00 38.70 O
ATOM 13 C1' G A 114 119.397 86.247 -15.925 1.00 38.70 C
ATOM 14 N9 G A 114 119.816 84.853 -15.789 1.00 34.29 N
ATOM 15 C8 G A 114 120.213 84.215 -14.640 1.00 34.29 C
ATOM 16 N7 G A 114 120.518 82.959 -14.830 1.00 34.29 N
ATOM 17 C5 G A 114 120.315 82.752 -16.186 1.00 34.29 C
ATOM 18 C6 G A 114 120.481 81.576 -16.972 1.00 34.29 C
ATOM 19 O6 G A 114 120.868 80.452 -16.612 1.00 34.29 O
ATOM 20 N1 G A 114 120.150 81.802 -18.302 1.00 34.29 N
ATOM 21 C2 G A 114 119.725 83.003 -18.811 1.00 34.29 C
ATOM 22 N2 G A 114 119.440 83.015 -20.110 1.00 34.29 N
ATOM 23 N3 G A 114 119.582 84.110 -18.094 1.00 34.29 N
ATOM 24 C4 G A 114 119.887 83.911 -16.798 1.00 34.29 C
ATOM 25 P G A 115 115.061 87.048 -14.166 1.00 42.84 P
ATOM 26 OP1 G A 115 114.105 88.162 -13.894 1.00 38.17 O
ATOM 27 OP2 G A 115 115.109 85.888 -13.224 1.00 38.17 O
ATOM 28 O5' G A 115 114.833 86.539 -15.658 1.00 42.84 O
TER
ATOM 1 O3' U B 581 107.959 95.574 -8.187 1.00 55.45 O
ATOM 2 P G B 582 108.946 95.035 -7.042 1.00 55.66 P
ATOM 3 OP1 G B 582 108.109 94.601 -5.886 1.00 51.78 O
ATOM 4 OP2 G B 582 109.985 96.083 -6.834 1.00 51.78 O
ATOM 5 O5' G B 582 109.583 93.733 -7.702 1.00 55.66 O
ATOM 6 C5' G B 582 108.714 92.678 -8.155 1.00 55.66 C
ATOM 7 C4' G B 582 109.461 91.672 -8.998 1.00 55.66 C
ATOM 8 O4' G B 582 109.869 92.261 -10.259 1.00 55.66 O
ATOM 9 C3' G B 582 110.734 91.094 -8.417 1.00 55.66 C
ATOM 10 O3' G B 582 110.468 90.053 -7.508 1.00 55.66 O
ATOM 11 C2' G B 582 111.447 90.591 -9.660 1.00 55.66 C
ATOM 12 O2' G B 582 110.934 89.356 -10.110 1.00 55.66 O
ATOM 13 C1' G B 582 111.085 91.670 -10.680 1.00 55.66 C
ATOM 14 N9 G B 582 112.114 92.702 -10.716 1.00 51.78 N
ATOM 15 C8 G B 582 112.059 93.954 -10.162 1.00 51.78 C
ATOM 16 N7 G B 582 113.152 94.637 -10.340 1.00 51.78 N
ATOM 17 C5 G B 582 113.977 93.786 -11.059 1.00 51.78 C
ATOM 18 C6 G B 582 115.293 93.970 -11.539 1.00 51.78 C
ATOM 19 O6 G B 582 116.022 94.959 -11.426 1.00 51.78 O
ATOM 20 N1 G B 582 115.751 92.848 -12.211 1.00 51.78 N
ATOM 21 C2 G B 582 115.038 91.701 -12.401 1.00 51.78 C
ATOM 22 N2 G B 582 115.644 90.733 -13.084 1.00 51.78 N
ATOM 23 N3 G B 582 113.817 91.514 -11.960 1.00 51.78 N
ATOM 24 C4 G B 582 113.350 92.591 -11.302 1.00 51.78 C
ATOM 25 P U B 583 111.410 89.878 -6.221 1.00 55.61 P
ATOM 26 OP1 U B 583 110.851 88.757 -5.423 1.00 66.25 O
ATOM 27 OP2 U B 583 111.628 91.198 -5.581 1.00 66.25 O
ATOM 28 O5' U B 583 112.805 89.423 -6.832 1.00 55.61 O
TER
ATOM 2 P G A 114 120.095 86.794 -10.607 1.00 38.70 P
ATOM 3 OP1 G A 114 119.542 87.879 -9.764 1.00 34.29 O
ATOM 4 OP2 G A 114 120.054 85.386 -10.111 1.00 34.29 O
ATOM 5 O5' G A 114 119.400 86.817 -12.037 1.00 38.70 O
ATOM 6 C5' G A 114 119.325 88.027 -12.774 1.00 38.70 C
ATOM 7 C4' G A 114 118.933 87.752 -14.198 1.00 38.70 C
ATOM 8 O4' G A 114 119.972 87.012 -14.883 1.00 38.70 O
ATOM 9 C3' G A 114 117.682 86.932 -14.428 1.00 38.70 C
ATOM 10 O3' G A 114 116.515 87.741 -14.272 1.00 38.70 O
ATOM 11 C2' G A 114 117.884 86.453 -15.861 1.00 38.70 C
ATOM 12 O2' G A 114 117.575 87.462 -16.793 1.00 38.70 O
ATOM 13 C1' G A 114 119.397 86.247 -15.925 1.00 38.70 C
ATOM 14 N9 G A 114 119.816 84.853 -15.789 1.00 34.29 N
ATOM 15 C8 G A 114 120.213 84.215 -14.640 1.00 34.29 C
ATOM 16 N7 G A 114 120.518 82.959 -14.830 1.00 34.29 N
ATOM 17 C5 G A 114 120.315 82.752 -16.186 1.00 34.29 C
ATOM 18 C6 G A 114 120.481 81.576 -16.972 1.00 34.29 C
ATOM 19 O6 G A 114 120.868 80.452 -16.612 1.00 34.29 O
ATOM 20 N1 G A 114 120.150 81.802 -18.302 1.00 34.29 N
ATOM 21 C2 G A 114 119.725 83.003 -18.811 1.00 34.29 C
ATOM 22 N2 G A 114 119.440 83.015 -20.110 1.00 34.29 N
ATOM 23 N3 G A 114 119.582 84.110 -18.094 1.00 34.29 N
ATOM 24 C4 G A 114 119.887 83.911 -16.798 1.00 34.29 C
ATOM 25 P G A 115 115.061 87.048 -14.166 1.00 42.84 P
ATOM 26 OP1 G A 115 114.105 88.162 -13.894 1.00 38.17 O
ATOM 27 OP2 G A 115 115.109 85.888 -13.224 1.00 38.17 O
ATOM 28 O5' G A 115 114.833 86.539 -15.658 1.00 42.84 O
TER
ATOM 1 O3' U B 581 107.959 95.574 -8.187 1.00 55.45 O
ATOM 2 P G B 582 108.946 95.035 -7.042 1.00 55.66 P
ATOM 3 OP1 G B 582 108.109 94.601 -5.886 1.00 51.78 O
ATOM 4 OP2 G B 582 109.985 96.083 -6.834 1.00 51.78 O
ATOM 5 O5' G B 582 109.583 93.733 -7.702 1.00 55.66 O
ATOM 6 C5' G B 582 108.714 92.678 -8.155 1.00 55.66 C
ATOM 7 C4' G B 582 109.461 91.672 -8.998 1.00 55.66 C
ATOM 8 O4' G B 582 109.869 92.261 -10.259 1.00 55.66 O
ATOM 9 C3' G B 582 110.734 91.094 -8.417 1.00 55.66 C
ATOM 10 O3' G B 582 110.468 90.053 -7.508 1.00 55.66 O
ATOM 11 C2' G B 582 111.447 90.591 -9.660 1.00 55.66 C
ATOM 12 O2' G B 582 110.934 89.356 -10.110 1.00 55.66 O
ATOM 13 C1' G B 582 111.085 91.670 -10.680 1.00 55.66 C
ATOM 14 N9 G B 582 112.114 92.702 -10.716 1.00 51.78 N
ATOM 15 C8 G B 582 112.059 93.954 -10.162 1.00 51.78 C
ATOM 16 N7 G B 582 113.152 94.637 -10.340 1.00 51.78 N
ATOM 17 C5 G B 582 113.977 93.786 -11.059 1.00 51.78 C
ATOM 18 C6 G B 582 115.293 93.970 -11.539 1.00 51.78 C
ATOM 19 O6 G B 582 116.022 94.959 -11.426 1.00 51.78 O
ATOM 20 N1 G B 582 115.751 92.848 -12.211 1.00 51.78 N
ATOM 21 C2 G B 582 115.038 91.701 -12.401 1.00 51.78 C
ATOM 22 N2 G B 582 115.644 90.733 -13.084 1.00 51.78 N
ATOM 23 N3 G B 582 113.817 91.514 -11.960 1.00 51.78 N
ATOM 24 C4 G B 582 113.350 92.591 -11.302 1.00 51.78 C
ATOM 25 P U B 583 111.410 89.878 -6.221 1.00 55.61 P
ATOM 26 OP1 U B 583 110.851 88.757 -5.423 1.00 66.25 O
ATOM 27 OP2 U B 583 111.628 91.198 -5.581 1.00 66.25 O
ATOM 28 O5' U B 583 112.805 89.423 -6.832 1.00 55.61 O
TER
Atoms:
OP1: (119.542,87.879,-9.764)
OP2: (120.054,85.386,-10.111)
C3': (117.682,86.932,-14.428)
C1': (119.397,86.247,-15.925)
C5': (119.325,88.027,-12.774)
O6: (120.868,80.452,-16.612)
O4': (119.972,87.012,-14.883)
C8: (120.213,84.215,-14.640)
C2: (119.725,83.003,-18.811)
C6: (120.481,81.576,-16.972)
C5: (120.315,82.752,-16.186)
C4: (119.887,83.911,-16.798)
P: (120.095,86.794,-10.607)
C4': (118.933,87.752,-14.198)
C2': (117.884,86.453,-15.861)
O2': (117.575,87.462,-16.793)
N1: (120.150,81.802,-18.302)
N2: (119.440,83.015,-20.110)
N3: (119.582,84.110,-18.094)
N7: (120.518,82.959,-14.830)
N9: (119.816,84.853,-15.789)
O5': (119.400,86.817,-12.037)
O3': (116.515,87.741,-14.272)
OP2: (120.054,85.386,-10.111)
C3': (117.682,86.932,-14.428)
C1': (119.397,86.247,-15.925)
C5': (119.325,88.027,-12.774)
O6: (120.868,80.452,-16.612)
O4': (119.972,87.012,-14.883)
C8: (120.213,84.215,-14.640)
C2: (119.725,83.003,-18.811)
C6: (120.481,81.576,-16.972)
C5: (120.315,82.752,-16.186)
C4: (119.887,83.911,-16.798)
P: (120.095,86.794,-10.607)
C4': (118.933,87.752,-14.198)
C2': (117.884,86.453,-15.861)
O2': (117.575,87.462,-16.793)
N1: (120.150,81.802,-18.302)
N2: (119.440,83.015,-20.110)
N3: (119.582,84.110,-18.094)
N7: (120.518,82.959,-14.830)
N9: (119.816,84.853,-15.789)
O5': (119.400,86.817,-12.037)
O3': (116.515,87.741,-14.272)
OP1: (108.109,94.601,-5.886)
OP2: (109.985,96.083,-6.834)
C3': (110.734,91.094,-8.417)
C1': (111.085,91.670,-10.680)
C5': (108.714,92.678,-8.155)
O6: (116.022,94.959,-11.426)
O4': (109.869,92.261,-10.259)
C8: (112.059,93.954,-10.162)
C2: (115.038,91.701,-12.401)
C6: (115.293,93.970,-11.539)
C5: (113.977,93.786,-11.059)
C4: (113.350,92.591,-11.302)
P: (108.946,95.035,-7.042)
C4': (109.461,91.672,-8.998)
C2': (111.447,90.591,-9.660)
O2': (110.934,89.356,-10.110)
N1: (115.751,92.848,-12.211)
N2: (115.644,90.733,-13.084)
N3: (113.817,91.514,-11.960)
N7: (113.152,94.637,-10.340)
N9: (112.114,92.702,-10.716)
O5': (109.583,93.733,-7.702)
O3': (110.468,90.053,-7.508)
OP2: (109.985,96.083,-6.834)
C3': (110.734,91.094,-8.417)
C1': (111.085,91.670,-10.680)
C5': (108.714,92.678,-8.155)
O6: (116.022,94.959,-11.426)
O4': (109.869,92.261,-10.259)
C8: (112.059,93.954,-10.162)
C2: (115.038,91.701,-12.401)
C6: (115.293,93.970,-11.539)
C5: (113.977,93.786,-11.059)
C4: (113.350,92.591,-11.302)
P: (108.946,95.035,-7.042)
C4': (109.461,91.672,-8.998)
C2': (111.447,90.591,-9.660)
O2': (110.934,89.356,-10.110)
N1: (115.751,92.848,-12.211)
N2: (115.644,90.733,-13.084)
N3: (113.817,91.514,-11.960)
N7: (113.152,94.637,-10.340)
N9: (112.114,92.702,-10.716)
O5': (109.583,93.733,-7.702)
O3': (110.468,90.053,-7.508)
Image (generated by PyMOL):