ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2UUB:A114:A582

Extra

PDB:
ATOM 1 O3' U A 113 121.025 86.491 -11.161 1.00 36.58 O
ATOM 2 P G A 114 119.531 86.001 -10.871 1.00 37.30 P
ATOM 3 OP1 G A 114 118.934 87.071 -10.028 1.00 37.80 O
ATOM 4 OP2 G A 114 119.553 84.602 -10.391 1.00 37.46 O
ATOM 5 O5' G A 114 118.841 86.057 -12.294 1.00 38.46 O
ATOM 6 C5' G A 114 118.693 87.313 -12.962 1.00 39.06 C
ATOM 7 C4' G A 114 118.350 87.110 -14.411 1.00 39.86 C
ATOM 8 O4' G A 114 119.408 86.387 -15.082 1.00 40.33 O
ATOM 9 C3' G A 114 117.103 86.307 -14.715 1.00 40.87 C
ATOM 10 O3' G A 114 115.934 87.114 -14.581 1.00 41.82 O
ATOM 11 C2' G A 114 117.350 85.859 -16.153 1.00 40.39 C
ATOM 12 O2' G A 114 117.043 86.866 -17.090 1.00 40.55 O
ATOM 13 C1' G A 114 118.864 85.659 -16.169 1.00 40.52 C
ATOM 14 N9 G A 114 119.259 84.259 -16.063 1.00 40.95 N
ATOM 15 C8 G A 114 119.621 83.579 -14.925 1.00 41.23 C
ATOM 16 N7 G A 114 119.905 82.323 -15.148 1.00 41.32 N
ATOM 17 C5 G A 114 119.724 82.165 -16.516 1.00 40.30 C
ATOM 18 C6 G A 114 119.881 81.014 -17.339 1.00 39.22 C
ATOM 19 O6 G A 114 120.230 79.876 -17.015 1.00 39.43 O
ATOM 20 N1 G A 114 119.584 81.292 -18.666 1.00 38.88 N
ATOM 21 C2 G A 114 119.190 82.516 -19.148 1.00 39.31 C
ATOM 22 N2 G A 114 118.934 82.577 -20.464 1.00 36.28 N
ATOM 23 N3 G A 114 119.053 83.599 -18.395 1.00 40.32 N
ATOM 24 C4 G A 114 119.330 83.350 -17.097 1.00 40.32 C
ATOM 25 P G A 115 114.483 86.420 -14.521 1.00 41.44 P
ATOM 26 OP1 G A 115 113.525 87.547 -14.345 1.00 40.69 O
ATOM 27 OP2 G A 115 114.506 85.313 -13.537 1.00 39.82 O
ATOM 28 O5' G A 115 114.317 85.840 -15.994 1.00 40.05 O
TER

ATOM 1 O3' U B 581 107.424 94.945 -8.553 1.00 52.51 O
ATOM 2 P G B 582 108.381 94.236 -7.475 1.00 53.60 P
ATOM 3 OP1 G B 582 107.500 93.728 -6.376 1.00 52.35 O
ATOM 4 OP2 G B 582 109.494 95.161 -7.135 1.00 52.38 O
ATOM 5 O5' G B 582 108.956 92.973 -8.275 1.00 52.28 O
ATOM 6 C5' G B 582 108.072 91.926 -8.717 1.00 51.27 C
ATOM 7 C4' G B 582 108.828 90.869 -9.494 1.00 51.92 C
ATOM 8 O4' G B 582 109.263 91.399 -10.778 1.00 52.95 O
ATOM 9 C3' G B 582 110.096 90.324 -8.861 1.00 50.69 C
ATOM 10 O3' G B 582 109.861 89.349 -7.887 1.00 49.93 O
ATOM 11 C2' G B 582 110.859 89.787 -10.065 1.00 51.42 C
ATOM 12 O2' G B 582 110.450 88.508 -10.496 1.00 51.10 O
ATOM 13 C1' G B 582 110.512 90.824 -11.132 1.00 52.13 C
ATOM 14 N9 G B 582 111.522 91.876 -11.103 1.00 53.19 N
ATOM 15 C8 G B 582 111.431 93.105 -10.490 1.00 53.83 C
ATOM 16 N7 G B 582 112.529 93.804 -10.580 1.00 53.92 N
ATOM 17 C5 G B 582 113.390 92.995 -11.307 1.00 53.30 C
ATOM 18 C6 G B 582 114.719 93.211 -11.709 1.00 53.10 C
ATOM 19 O6 G B 582 115.443 94.192 -11.486 1.00 52.93 O
ATOM 20 N1 G B 582 115.209 92.134 -12.441 1.00 52.80 N
ATOM 21 C2 G B 582 114.509 90.998 -12.743 1.00 50.44 C
ATOM 22 N2 G B 582 115.144 90.095 -13.485 1.00 49.64 N
ATOM 23 N3 G B 582 113.276 90.774 -12.355 1.00 52.30 N
ATOM 24 C4 G B 582 112.777 91.808 -11.649 1.00 53.31 C
ATOM 25 P U B 583 110.852 89.252 -6.626 1.00 51.88 P
ATOM 26 OP1 U B 583 110.354 88.165 -5.728 1.00 51.66 O
ATOM 27 OP2 U B 583 111.063 90.615 -6.079 1.00 49.71 O
ATOM 28 O5' U B 583 112.227 88.764 -7.275 1.00 53.54 O
TER

Atoms:
OP1: (118.934,87.071,-10.028)
OP2: (119.553,84.602,-10.391)
C3': (117.103,86.307,-14.715)
C1': (118.864,85.659,-16.169)
C5': (118.693,87.313,-12.962)
O6: (120.230,79.876,-17.015)
O4': (119.408,86.387,-15.082)
C8: (119.621,83.579,-14.925)
C2: (119.190,82.516,-19.148)
C6: (119.881,81.014,-17.339)
C5: (119.724,82.165,-16.516)
C4: (119.330,83.350,-17.097)
P: (119.531,86.001,-10.871)
C4': (118.350,87.110,-14.411)
C2': (117.350,85.859,-16.153)
O2': (117.043,86.866,-17.090)
N1: (119.584,81.292,-18.666)
N2: (118.934,82.577,-20.464)
N3: (119.053,83.599,-18.395)
N7: (119.905,82.323,-15.148)
N9: (119.259,84.259,-16.063)
O5': (118.841,86.057,-12.294)
O3': (115.934,87.114,-14.581)
OP1: (107.500,93.728,-6.376)
OP2: (109.494,95.161,-7.135)
C3': (110.096,90.324,-8.861)
C1': (110.512,90.824,-11.132)
C5': (108.072,91.926,-8.717)
O6: (115.443,94.192,-11.486)
O4': (109.263,91.399,-10.778)
C8: (111.431,93.105,-10.490)
C2: (114.509,90.998,-12.743)
C6: (114.719,93.211,-11.709)
C5: (113.390,92.995,-11.307)
C4: (112.777,91.808,-11.649)
P: (108.381,94.236,-7.475)
C4': (108.828,90.869,-9.494)
C2': (110.859,89.787,-10.065)
O2': (110.450,88.508,-10.496)
N1: (115.209,92.134,-12.441)
N2: (115.144,90.095,-13.485)
N3: (113.276,90.774,-12.355)
N7: (112.529,93.804,-10.580)
N9: (111.522,91.876,-11.103)
O5': (108.956,92.973,-8.275)
O3': (109.861,89.349,-7.887)
Image (generated by PyMOL):
PyMOL image
show in jmol