Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A114:A582
Extra
PDB:
ATOM 1 O3' U A 113 122.212 87.463 -10.498 1.00 58.40 O
ATOM 2 P G A 114 120.684 86.981 -10.339 1.00 59.21 P
ATOM 3 OP1 G A 114 120.034 88.045 -9.520 1.00 60.03 O
ATOM 4 OP2 G A 114 120.640 85.575 -9.882 1.00 60.19 O
ATOM 5 O5' G A 114 120.105 87.032 -11.810 1.00 56.83 O
ATOM 6 C5' G A 114 120.026 88.270 -12.505 1.00 55.17 C
ATOM 7 C4' G A 114 119.646 88.040 -13.939 1.00 54.96 C
ATOM 8 O4' G A 114 120.685 87.292 -14.618 1.00 54.09 O
ATOM 9 C3' G A 114 118.385 87.243 -14.194 1.00 55.50 C
ATOM 10 O3' G A 114 117.221 88.055 -14.038 1.00 57.65 O
ATOM 11 C2' G A 114 118.600 86.757 -15.625 1.00 55.37 C
ATOM 12 O2' G A 114 118.287 87.723 -16.607 1.00 56.31 O
ATOM 13 C1' G A 114 120.110 86.537 -15.664 1.00 54.58 C
ATOM 14 N9 G A 114 120.481 85.135 -15.511 1.00 55.33 N
ATOM 15 C8 G A 114 120.768 84.459 -14.345 1.00 54.62 C
ATOM 16 N7 G A 114 121.061 83.199 -14.543 1.00 55.42 N
ATOM 17 C5 G A 114 120.969 83.034 -15.924 1.00 56.38 C
ATOM 18 C6 G A 114 121.182 81.875 -16.742 1.00 56.72 C
ATOM 19 O6 G A 114 121.547 80.733 -16.401 1.00 59.20 O
ATOM 20 N1 G A 114 120.938 82.151 -18.083 1.00 54.12 N
ATOM 21 C2 G A 114 120.560 83.369 -18.581 1.00 53.31 C
ATOM 22 N2 G A 114 120.348 83.421 -19.897 1.00 53.51 N
ATOM 23 N3 G A 114 120.393 84.456 -17.844 1.00 53.20 N
ATOM 24 C4 G A 114 120.606 84.217 -16.534 1.00 55.27 C
ATOM 25 P G A 115 115.752 87.378 -14.054 1.00 59.81 P
ATOM 26 OP1 G A 115 114.770 88.509 -13.922 1.00 57.10 O
ATOM 27 OP2 G A 115 115.739 86.248 -13.079 1.00 57.66 O
ATOM 28 O5' G A 115 115.626 86.814 -15.534 1.00 56.73 O
TER
ATOM 1 O3' U B 581 108.673 95.860 -8.228 1.00 70.09 O
ATOM 2 P G B 582 109.568 95.331 -7.004 1.00 71.00 P
ATOM 3 OP1 G B 582 108.641 94.964 -5.888 1.00 72.84 O
ATOM 4 OP2 G B 582 110.648 96.313 -6.747 1.00 71.61 O
ATOM 5 O5' G B 582 110.182 93.998 -7.576 1.00 69.67 O
ATOM 6 C5' G B 582 109.322 93.016 -8.160 1.00 68.57 C
ATOM 7 C4' G B 582 110.118 92.029 -8.971 1.00 67.86 C
ATOM 8 O4' G B 582 110.587 92.641 -10.199 1.00 67.28 O
ATOM 9 C3' G B 582 111.368 91.490 -8.310 1.00 66.97 C
ATOM 10 O3' G B 582 111.087 90.452 -7.426 1.00 68.72 O
ATOM 11 C2' G B 582 112.190 91.025 -9.500 1.00 66.62 C
ATOM 12 O2' G B 582 111.814 89.747 -9.961 1.00 67.11 O
ATOM 13 C1' G B 582 111.841 92.082 -10.552 1.00 65.79 C
ATOM 14 N9 G B 582 112.850 93.135 -10.537 1.00 63.02 N
ATOM 15 C8 G B 582 112.776 94.369 -9.938 1.00 62.44 C
ATOM 16 N7 G B 582 113.890 95.042 -10.017 1.00 61.07 N
ATOM 17 C5 G B 582 114.739 94.209 -10.726 1.00 59.86 C
ATOM 18 C6 G B 582 116.072 94.385 -11.098 1.00 58.96 C
ATOM 19 O6 G B 582 116.807 95.345 -10.867 1.00 60.41 O
ATOM 20 N1 G B 582 116.553 93.295 -11.812 1.00 59.39 N
ATOM 21 C2 G B 582 115.827 92.180 -12.131 1.00 58.94 C
ATOM 22 N2 G B 582 116.445 91.239 -12.846 1.00 58.54 N
ATOM 23 N3 G B 582 114.579 92.001 -11.780 1.00 61.29 N
ATOM 24 C4 G B 582 114.101 93.046 -11.080 1.00 61.48 C
ATOM 25 P U B 583 112.007 90.265 -6.126 1.00 72.14 P
ATOM 26 OP1 U B 583 111.471 89.091 -5.374 1.00 71.43 O
ATOM 27 OP2 U B 583 112.174 91.584 -5.455 1.00 71.45 O
ATOM 28 O5' U B 583 113.400 89.837 -6.730 1.00 73.66 O
TER
ATOM 2 P G A 114 120.684 86.981 -10.339 1.00 59.21 P
ATOM 3 OP1 G A 114 120.034 88.045 -9.520 1.00 60.03 O
ATOM 4 OP2 G A 114 120.640 85.575 -9.882 1.00 60.19 O
ATOM 5 O5' G A 114 120.105 87.032 -11.810 1.00 56.83 O
ATOM 6 C5' G A 114 120.026 88.270 -12.505 1.00 55.17 C
ATOM 7 C4' G A 114 119.646 88.040 -13.939 1.00 54.96 C
ATOM 8 O4' G A 114 120.685 87.292 -14.618 1.00 54.09 O
ATOM 9 C3' G A 114 118.385 87.243 -14.194 1.00 55.50 C
ATOM 10 O3' G A 114 117.221 88.055 -14.038 1.00 57.65 O
ATOM 11 C2' G A 114 118.600 86.757 -15.625 1.00 55.37 C
ATOM 12 O2' G A 114 118.287 87.723 -16.607 1.00 56.31 O
ATOM 13 C1' G A 114 120.110 86.537 -15.664 1.00 54.58 C
ATOM 14 N9 G A 114 120.481 85.135 -15.511 1.00 55.33 N
ATOM 15 C8 G A 114 120.768 84.459 -14.345 1.00 54.62 C
ATOM 16 N7 G A 114 121.061 83.199 -14.543 1.00 55.42 N
ATOM 17 C5 G A 114 120.969 83.034 -15.924 1.00 56.38 C
ATOM 18 C6 G A 114 121.182 81.875 -16.742 1.00 56.72 C
ATOM 19 O6 G A 114 121.547 80.733 -16.401 1.00 59.20 O
ATOM 20 N1 G A 114 120.938 82.151 -18.083 1.00 54.12 N
ATOM 21 C2 G A 114 120.560 83.369 -18.581 1.00 53.31 C
ATOM 22 N2 G A 114 120.348 83.421 -19.897 1.00 53.51 N
ATOM 23 N3 G A 114 120.393 84.456 -17.844 1.00 53.20 N
ATOM 24 C4 G A 114 120.606 84.217 -16.534 1.00 55.27 C
ATOM 25 P G A 115 115.752 87.378 -14.054 1.00 59.81 P
ATOM 26 OP1 G A 115 114.770 88.509 -13.922 1.00 57.10 O
ATOM 27 OP2 G A 115 115.739 86.248 -13.079 1.00 57.66 O
ATOM 28 O5' G A 115 115.626 86.814 -15.534 1.00 56.73 O
TER
ATOM 1 O3' U B 581 108.673 95.860 -8.228 1.00 70.09 O
ATOM 2 P G B 582 109.568 95.331 -7.004 1.00 71.00 P
ATOM 3 OP1 G B 582 108.641 94.964 -5.888 1.00 72.84 O
ATOM 4 OP2 G B 582 110.648 96.313 -6.747 1.00 71.61 O
ATOM 5 O5' G B 582 110.182 93.998 -7.576 1.00 69.67 O
ATOM 6 C5' G B 582 109.322 93.016 -8.160 1.00 68.57 C
ATOM 7 C4' G B 582 110.118 92.029 -8.971 1.00 67.86 C
ATOM 8 O4' G B 582 110.587 92.641 -10.199 1.00 67.28 O
ATOM 9 C3' G B 582 111.368 91.490 -8.310 1.00 66.97 C
ATOM 10 O3' G B 582 111.087 90.452 -7.426 1.00 68.72 O
ATOM 11 C2' G B 582 112.190 91.025 -9.500 1.00 66.62 C
ATOM 12 O2' G B 582 111.814 89.747 -9.961 1.00 67.11 O
ATOM 13 C1' G B 582 111.841 92.082 -10.552 1.00 65.79 C
ATOM 14 N9 G B 582 112.850 93.135 -10.537 1.00 63.02 N
ATOM 15 C8 G B 582 112.776 94.369 -9.938 1.00 62.44 C
ATOM 16 N7 G B 582 113.890 95.042 -10.017 1.00 61.07 N
ATOM 17 C5 G B 582 114.739 94.209 -10.726 1.00 59.86 C
ATOM 18 C6 G B 582 116.072 94.385 -11.098 1.00 58.96 C
ATOM 19 O6 G B 582 116.807 95.345 -10.867 1.00 60.41 O
ATOM 20 N1 G B 582 116.553 93.295 -11.812 1.00 59.39 N
ATOM 21 C2 G B 582 115.827 92.180 -12.131 1.00 58.94 C
ATOM 22 N2 G B 582 116.445 91.239 -12.846 1.00 58.54 N
ATOM 23 N3 G B 582 114.579 92.001 -11.780 1.00 61.29 N
ATOM 24 C4 G B 582 114.101 93.046 -11.080 1.00 61.48 C
ATOM 25 P U B 583 112.007 90.265 -6.126 1.00 72.14 P
ATOM 26 OP1 U B 583 111.471 89.091 -5.374 1.00 71.43 O
ATOM 27 OP2 U B 583 112.174 91.584 -5.455 1.00 71.45 O
ATOM 28 O5' U B 583 113.400 89.837 -6.730 1.00 73.66 O
TER
Atoms:
OP1: (120.034,88.045,-9.520)
OP2: (120.640,85.575,-9.882)
C3': (118.385,87.243,-14.194)
C1': (120.110,86.537,-15.664)
C5': (120.026,88.270,-12.505)
O6: (121.547,80.733,-16.401)
O4': (120.685,87.292,-14.618)
C8: (120.768,84.459,-14.345)
C2: (120.560,83.369,-18.581)
C6: (121.182,81.875,-16.742)
C5: (120.969,83.034,-15.924)
C4: (120.606,84.217,-16.534)
P: (120.684,86.981,-10.339)
C4': (119.646,88.040,-13.939)
C2': (118.600,86.757,-15.625)
O2': (118.287,87.723,-16.607)
N1: (120.938,82.151,-18.083)
N2: (120.348,83.421,-19.897)
N3: (120.393,84.456,-17.844)
N7: (121.061,83.199,-14.543)
N9: (120.481,85.135,-15.511)
O5': (120.105,87.032,-11.810)
O3': (117.221,88.055,-14.038)
OP2: (120.640,85.575,-9.882)
C3': (118.385,87.243,-14.194)
C1': (120.110,86.537,-15.664)
C5': (120.026,88.270,-12.505)
O6: (121.547,80.733,-16.401)
O4': (120.685,87.292,-14.618)
C8: (120.768,84.459,-14.345)
C2: (120.560,83.369,-18.581)
C6: (121.182,81.875,-16.742)
C5: (120.969,83.034,-15.924)
C4: (120.606,84.217,-16.534)
P: (120.684,86.981,-10.339)
C4': (119.646,88.040,-13.939)
C2': (118.600,86.757,-15.625)
O2': (118.287,87.723,-16.607)
N1: (120.938,82.151,-18.083)
N2: (120.348,83.421,-19.897)
N3: (120.393,84.456,-17.844)
N7: (121.061,83.199,-14.543)
N9: (120.481,85.135,-15.511)
O5': (120.105,87.032,-11.810)
O3': (117.221,88.055,-14.038)
OP1: (108.641,94.964,-5.888)
OP2: (110.648,96.313,-6.747)
C3': (111.368,91.490,-8.310)
C1': (111.841,92.082,-10.552)
C5': (109.322,93.016,-8.160)
O6: (116.807,95.345,-10.867)
O4': (110.587,92.641,-10.199)
C8: (112.776,94.369,-9.938)
C2: (115.827,92.180,-12.131)
C6: (116.072,94.385,-11.098)
C5: (114.739,94.209,-10.726)
C4: (114.101,93.046,-11.080)
P: (109.568,95.331,-7.004)
C4': (110.118,92.029,-8.971)
C2': (112.190,91.025,-9.500)
O2': (111.814,89.747,-9.961)
N1: (116.553,93.295,-11.812)
N2: (116.445,91.239,-12.846)
N3: (114.579,92.001,-11.780)
N7: (113.890,95.042,-10.017)
N9: (112.850,93.135,-10.537)
O5': (110.182,93.998,-7.576)
O3': (111.087,90.452,-7.426)
OP2: (110.648,96.313,-6.747)
C3': (111.368,91.490,-8.310)
C1': (111.841,92.082,-10.552)
C5': (109.322,93.016,-8.160)
O6: (116.807,95.345,-10.867)
O4': (110.587,92.641,-10.199)
C8: (112.776,94.369,-9.938)
C2: (115.827,92.180,-12.131)
C6: (116.072,94.385,-11.098)
C5: (114.739,94.209,-10.726)
C4: (114.101,93.046,-11.080)
P: (109.568,95.331,-7.004)
C4': (110.118,92.029,-8.971)
C2': (112.190,91.025,-9.500)
O2': (111.814,89.747,-9.961)
N1: (116.553,93.295,-11.812)
N2: (116.445,91.239,-12.846)
N3: (114.579,92.001,-11.780)
N7: (113.890,95.042,-10.017)
N9: (112.850,93.135,-10.537)
O5': (110.182,93.998,-7.576)
O3': (111.087,90.452,-7.426)
Image (generated by PyMOL):