Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JJ2:0539:0538
Extra
PDB:
ATOM 1 O3' C A 538 -2.139 133.747 77.398 1.00 47.53 O
ATOM 2 P A A 539 -1.843 132.170 77.382 1.00 48.37 P
ATOM 3 OP1 A A 539 -3.141 131.470 77.189 1.00 49.24 O
ATOM 4 OP2 A A 539 -1.012 131.842 78.571 1.00 46.18 O
ATOM 5 O5' A A 539 -0.973 131.962 76.062 1.00 44.02 O
ATOM 6 C5' A A 539 -1.498 132.272 74.755 1.00 40.18 C
ATOM 7 C4' A A 539 -0.388 132.211 73.733 1.00 40.78 C
ATOM 8 O4' A A 539 0.593 133.224 74.061 1.00 41.76 O
ATOM 9 C3' A A 539 0.387 130.902 73.722 1.00 40.61 C
ATOM 10 O3' A A 539 -0.227 129.971 72.839 1.00 38.66 O
ATOM 11 C2' A A 539 1.769 131.322 73.241 1.00 39.83 C
ATOM 12 O2' A A 539 1.826 131.464 71.836 1.00 37.01 O
ATOM 13 C1' A A 539 1.897 132.710 73.871 1.00 40.70 C
ATOM 14 N9 A A 539 2.604 132.797 75.151 1.00 42.64 N
ATOM 15 C8 A A 539 2.068 132.719 76.415 1.00 43.12 C
ATOM 16 N7 A A 539 2.935 132.931 77.372 1.00 41.94 N
ATOM 17 C5 A A 539 4.128 133.144 76.698 1.00 41.67 C
ATOM 18 C6 A A 539 5.424 133.437 77.149 1.00 40.81 C
ATOM 19 N6 A A 539 5.738 133.590 78.434 1.00 38.04 N
ATOM 20 N1 A A 539 6.396 133.576 76.220 1.00 40.37 N
ATOM 21 C2 A A 539 6.073 133.431 74.928 1.00 40.48 C
ATOM 22 N3 A A 539 4.891 133.165 74.381 1.00 40.07 N
ATOM 23 C4 A A 539 3.947 133.036 75.331 1.00 41.42 C
ATOM 24 P A A 540 -0.899 128.645 73.428 1.00 38.11 P
ATOM 25 OP1 A A 540 -2.064 128.302 72.567 1.00 39.96 O
ATOM 26 OP2 A A 540 -1.094 128.835 74.884 1.00 39.17 O
ATOM 27 O5' A A 540 0.203 127.524 73.209 1.00 38.71 O
TER
ATOM 1 O3' A B 537 0.094 136.374 82.530 1.00 51.68 O
ATOM 2 P C B 538 0.367 134.952 81.844 1.00 52.61 P
ATOM 3 OP1 C B 538 -0.524 133.967 82.492 1.00 52.34 O
ATOM 4 OP2 C B 538 1.833 134.726 81.845 1.00 53.16 O
ATOM 5 O5' C B 538 -0.090 135.143 80.329 1.00 51.75 O
ATOM 6 C5' C B 538 -1.433 135.533 79.990 1.00 48.94 C
ATOM 7 C4' C B 538 -1.532 135.801 78.507 1.00 49.80 C
ATOM 8 O4' C B 538 -0.658 136.905 78.154 1.00 51.98 O
ATOM 9 C3' C B 538 -1.079 134.662 77.610 1.00 49.09 C
ATOM 10 O3' C B 538 -2.139 133.747 77.398 1.00 47.53 O
ATOM 11 C2' C B 538 -0.699 135.382 76.325 1.00 51.26 C
ATOM 12 O2' C B 538 -1.825 135.706 75.538 1.00 52.06 O
ATOM 13 C1' C B 538 -0.089 136.675 76.872 1.00 53.12 C
ATOM 14 N1 C B 538 1.385 136.652 77.003 1.00 55.29 N
ATOM 15 C2 C B 538 2.179 136.953 75.879 1.00 55.22 C
ATOM 16 O2 C B 538 1.626 137.209 74.796 1.00 55.89 O
ATOM 17 N3 C B 538 3.526 136.956 76.005 1.00 55.44 N
ATOM 18 C4 C B 538 4.087 136.673 77.185 1.00 56.77 C
ATOM 19 N4 C B 538 5.420 136.702 77.269 1.00 57.53 N
ATOM 20 C5 C B 538 3.308 136.352 78.334 1.00 56.48 C
ATOM 21 C6 C B 538 1.977 136.351 78.200 1.00 55.86 C
ATOM 22 P A B 539 -1.843 132.170 77.382 1.00 48.37 P
ATOM 23 OP1 A B 539 -3.141 131.470 77.189 1.00 49.24 O
ATOM 24 OP2 A B 539 -1.012 131.842 78.571 1.00 46.18 O
ATOM 25 O5' A B 539 -0.973 131.962 76.062 1.00 44.02 O
TER
ATOM 2 P A A 539 -1.843 132.170 77.382 1.00 48.37 P
ATOM 3 OP1 A A 539 -3.141 131.470 77.189 1.00 49.24 O
ATOM 4 OP2 A A 539 -1.012 131.842 78.571 1.00 46.18 O
ATOM 5 O5' A A 539 -0.973 131.962 76.062 1.00 44.02 O
ATOM 6 C5' A A 539 -1.498 132.272 74.755 1.00 40.18 C
ATOM 7 C4' A A 539 -0.388 132.211 73.733 1.00 40.78 C
ATOM 8 O4' A A 539 0.593 133.224 74.061 1.00 41.76 O
ATOM 9 C3' A A 539 0.387 130.902 73.722 1.00 40.61 C
ATOM 10 O3' A A 539 -0.227 129.971 72.839 1.00 38.66 O
ATOM 11 C2' A A 539 1.769 131.322 73.241 1.00 39.83 C
ATOM 12 O2' A A 539 1.826 131.464 71.836 1.00 37.01 O
ATOM 13 C1' A A 539 1.897 132.710 73.871 1.00 40.70 C
ATOM 14 N9 A A 539 2.604 132.797 75.151 1.00 42.64 N
ATOM 15 C8 A A 539 2.068 132.719 76.415 1.00 43.12 C
ATOM 16 N7 A A 539 2.935 132.931 77.372 1.00 41.94 N
ATOM 17 C5 A A 539 4.128 133.144 76.698 1.00 41.67 C
ATOM 18 C6 A A 539 5.424 133.437 77.149 1.00 40.81 C
ATOM 19 N6 A A 539 5.738 133.590 78.434 1.00 38.04 N
ATOM 20 N1 A A 539 6.396 133.576 76.220 1.00 40.37 N
ATOM 21 C2 A A 539 6.073 133.431 74.928 1.00 40.48 C
ATOM 22 N3 A A 539 4.891 133.165 74.381 1.00 40.07 N
ATOM 23 C4 A A 539 3.947 133.036 75.331 1.00 41.42 C
ATOM 24 P A A 540 -0.899 128.645 73.428 1.00 38.11 P
ATOM 25 OP1 A A 540 -2.064 128.302 72.567 1.00 39.96 O
ATOM 26 OP2 A A 540 -1.094 128.835 74.884 1.00 39.17 O
ATOM 27 O5' A A 540 0.203 127.524 73.209 1.00 38.71 O
TER
ATOM 1 O3' A B 537 0.094 136.374 82.530 1.00 51.68 O
ATOM 2 P C B 538 0.367 134.952 81.844 1.00 52.61 P
ATOM 3 OP1 C B 538 -0.524 133.967 82.492 1.00 52.34 O
ATOM 4 OP2 C B 538 1.833 134.726 81.845 1.00 53.16 O
ATOM 5 O5' C B 538 -0.090 135.143 80.329 1.00 51.75 O
ATOM 6 C5' C B 538 -1.433 135.533 79.990 1.00 48.94 C
ATOM 7 C4' C B 538 -1.532 135.801 78.507 1.00 49.80 C
ATOM 8 O4' C B 538 -0.658 136.905 78.154 1.00 51.98 O
ATOM 9 C3' C B 538 -1.079 134.662 77.610 1.00 49.09 C
ATOM 10 O3' C B 538 -2.139 133.747 77.398 1.00 47.53 O
ATOM 11 C2' C B 538 -0.699 135.382 76.325 1.00 51.26 C
ATOM 12 O2' C B 538 -1.825 135.706 75.538 1.00 52.06 O
ATOM 13 C1' C B 538 -0.089 136.675 76.872 1.00 53.12 C
ATOM 14 N1 C B 538 1.385 136.652 77.003 1.00 55.29 N
ATOM 15 C2 C B 538 2.179 136.953 75.879 1.00 55.22 C
ATOM 16 O2 C B 538 1.626 137.209 74.796 1.00 55.89 O
ATOM 17 N3 C B 538 3.526 136.956 76.005 1.00 55.44 N
ATOM 18 C4 C B 538 4.087 136.673 77.185 1.00 56.77 C
ATOM 19 N4 C B 538 5.420 136.702 77.269 1.00 57.53 N
ATOM 20 C5 C B 538 3.308 136.352 78.334 1.00 56.48 C
ATOM 21 C6 C B 538 1.977 136.351 78.200 1.00 55.86 C
ATOM 22 P A B 539 -1.843 132.170 77.382 1.00 48.37 P
ATOM 23 OP1 A B 539 -3.141 131.470 77.189 1.00 49.24 O
ATOM 24 OP2 A B 539 -1.012 131.842 78.571 1.00 46.18 O
ATOM 25 O5' A B 539 -0.973 131.962 76.062 1.00 44.02 O
TER
Atoms:
OP1: (-3.141,131.470,77.189)
OP2: (-1.012,131.842,78.571)
C3': (0.387,130.902,73.722)
C1': (1.897,132.710,73.871)
C5': (-1.498,132.272,74.755)
O4': (0.593,133.224,74.061)
C8: (2.068,132.719,76.415)
O2': (1.826,131.464,71.836)
C6: (5.424,133.437,77.149)
C5: (4.128,133.144,76.698)
C4: (3.947,133.036,75.331)
P: (-1.843,132.170,77.382)
C4': (-0.388,132.211,73.733)
C2': (1.769,131.322,73.241)
C2: (6.073,133.431,74.928)
N1: (6.396,133.576,76.220)
N3: (4.891,133.165,74.381)
N6: (5.738,133.590,78.434)
N7: (2.935,132.931,77.372)
N9: (2.604,132.797,75.151)
O5': (-0.973,131.962,76.062)
O3': (-0.227,129.971,72.839)
OP2: (-1.012,131.842,78.571)
C3': (0.387,130.902,73.722)
C1': (1.897,132.710,73.871)
C5': (-1.498,132.272,74.755)
O4': (0.593,133.224,74.061)
C8: (2.068,132.719,76.415)
O2': (1.826,131.464,71.836)
C6: (5.424,133.437,77.149)
C5: (4.128,133.144,76.698)
C4: (3.947,133.036,75.331)
P: (-1.843,132.170,77.382)
C4': (-0.388,132.211,73.733)
C2': (1.769,131.322,73.241)
C2: (6.073,133.431,74.928)
N1: (6.396,133.576,76.220)
N3: (4.891,133.165,74.381)
N6: (5.738,133.590,78.434)
N7: (2.935,132.931,77.372)
N9: (2.604,132.797,75.151)
O5': (-0.973,131.962,76.062)
O3': (-0.227,129.971,72.839)
C2: (2.179,136.953,75.879)
OP1: (-0.524,133.967,82.492)
OP2: (1.833,134.726,81.845)
C4: (4.087,136.673,77.185)
O5': (-0.090,135.143,80.329)
C3': (-1.079,134.662,77.610)
C1': (-0.089,136.675,76.872)
O4': (-0.658,136.905,78.154)
C5': (-1.433,135.533,79.990)
P: (0.367,134.952,81.844)
O2: (1.626,137.209,74.796)
C4': (-1.532,135.801,78.507)
C2': (-0.699,135.382,76.325)
O2': (-1.825,135.706,75.538)
N1: (1.385,136.652,77.003)
N3: (3.526,136.956,76.005)
N4: (5.420,136.702,77.269)
C6: (1.977,136.351,78.200)
C5: (3.308,136.352,78.334)
O3': (-2.139,133.747,77.398)
OP1: (-0.524,133.967,82.492)
OP2: (1.833,134.726,81.845)
C4: (4.087,136.673,77.185)
O5': (-0.090,135.143,80.329)
C3': (-1.079,134.662,77.610)
C1': (-0.089,136.675,76.872)
O4': (-0.658,136.905,78.154)
C5': (-1.433,135.533,79.990)
P: (0.367,134.952,81.844)
O2: (1.626,137.209,74.796)
C4': (-1.532,135.801,78.507)
C2': (-0.699,135.382,76.325)
O2': (-1.825,135.706,75.538)
N1: (1.385,136.652,77.003)
N3: (3.526,136.956,76.005)
N4: (5.420,136.702,77.269)
C6: (1.977,136.351,78.200)
C5: (3.308,136.352,78.334)
O3': (-2.139,133.747,77.398)
Image (generated by PyMOL):