ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A105:A573

Extra

PDB:
ATOM 1 O3' U A 104 46.740 26.591 59.319 1.00 85.63 O
ATOM 2 P G A 105 45.741 26.407 60.574 1.00 89.39 P
ATOM 3 OP1 G A 105 45.978 27.542 61.499 1.00 89.93 O
ATOM 4 OP2 G A 105 45.893 25.008 61.074 1.00 83.28 O
ATOM 5 O5' G A 105 44.283 26.548 59.931 1.00 77.80 O
ATOM 6 C5' G A 105 43.931 27.706 59.177 1.00 78.02 C
ATOM 7 C4' G A 105 42.699 27.455 58.336 1.00 73.00 C
ATOM 8 O4' G A 105 42.973 26.491 57.291 1.00 70.99 O
ATOM 9 C3' G A 105 41.485 26.880 59.042 1.00 74.23 C
ATOM 10 O3' G A 105 40.731 27.866 59.726 1.00 75.85 O
ATOM 11 C2' G A 105 40.677 26.286 57.897 1.00 72.12 C
ATOM 12 O2' G A 105 39.825 27.222 57.286 1.00 70.91 O
ATOM 13 C1' G A 105 41.765 25.851 56.919 1.00 73.18 C
ATOM 14 N9 G A 105 41.926 24.399 56.941 1.00 79.73 N
ATOM 15 C8 G A 105 42.764 23.653 57.737 1.00 79.54 C
ATOM 16 N7 G A 105 42.618 22.364 57.570 1.00 76.06 N
ATOM 17 C5 G A 105 41.635 22.250 56.594 1.00 78.68 C
ATOM 18 C6 G A 105 41.044 21.096 56.010 1.00 79.91 C
ATOM 19 O6 G A 105 41.279 19.903 56.244 1.00 79.92 O
ATOM 20 N1 G A 105 40.081 21.436 55.068 1.00 81.42 N
ATOM 21 C2 G A 105 39.727 22.715 54.724 1.00 84.65 C
ATOM 22 N2 G A 105 38.770 22.826 53.790 1.00 84.20 N
ATOM 23 N3 G A 105 40.269 23.800 55.256 1.00 84.42 N
ATOM 24 C4 G A 105 41.208 23.495 56.182 1.00 81.64 C
ATOM 25 P G A 106 39.452 27.420 60.577 1.00 75.09 P
ATOM 26 OP1 G A 106 38.950 28.603 61.307 1.00 84.60 O
ATOM 27 OP2 G A 106 39.876 26.226 61.344 1.00 70.63 O
ATOM 28 O5' G A 106 38.393 27.015 59.449 1.00 73.16 O
TER

ATOM 1 O3' U B 572 38.540 37.686 67.770 1.00 83.09 O
ATOM 2 P G B 573 39.873 36.992 68.380 1.00 89.55 P
ATOM 3 OP1 G B 573 39.739 36.901 69.861 1.00 79.10 O
ATOM 4 OP2 G B 573 41.054 37.693 67.803 1.00 90.03 O
ATOM 5 O5' G B 573 39.855 35.494 67.819 1.00 84.79 O
ATOM 6 C5' G B 573 39.217 34.462 68.570 1.00 78.19 C
ATOM 7 C4' G B 573 38.883 33.275 67.702 1.00 80.52 C
ATOM 8 O4' G B 573 38.323 33.747 66.451 1.00 80.73 O
ATOM 9 C3' G B 573 40.034 32.382 67.281 1.00 82.15 C
ATOM 10 O3' G B 573 40.337 31.424 68.281 1.00 73.94 O
ATOM 11 C2' G B 573 39.487 31.726 66.027 1.00 84.94 C
ATOM 12 O2' G B 573 38.608 30.660 66.332 1.00 90.46 O
ATOM 13 C1' G B 573 38.718 32.886 65.400 1.00 83.20 C
ATOM 14 N9 G B 573 39.619 33.627 64.530 1.00 85.08 N
ATOM 15 C8 G B 573 40.141 34.876 64.744 1.00 89.10 C
ATOM 16 N7 G B 573 40.943 35.261 63.794 1.00 91.00 N
ATOM 17 C5 G B 573 40.944 34.207 62.899 1.00 90.16 C
ATOM 18 C6 G B 573 41.625 34.052 61.676 1.00 90.22 C
ATOM 19 O6 G B 573 42.380 34.856 61.108 1.00 93.92 O
ATOM 20 N1 G B 573 41.355 32.816 61.094 1.00 86.93 N
ATOM 21 C2 G B 573 40.531 31.859 61.629 1.00 88.19 C
ATOM 22 N2 G B 573 40.410 30.728 60.927 1.00 90.73 N
ATOM 23 N3 G B 573 39.880 32.001 62.766 1.00 85.72 N
ATOM 24 C4 G B 573 40.131 33.191 63.342 1.00 87.66 C
ATOM 25 P U B 574 41.855 31.268 68.780 1.00 77.56 P
ATOM 26 OP1 U B 574 41.820 30.480 70.046 1.00 71.23 O
ATOM 27 OP2 U B 574 42.451 32.633 68.784 1.00 79.48 O
ATOM 28 O5' U B 574 42.566 30.440 67.613 1.00 85.60 O
TER

Atoms:
OP1: (45.978,27.542,61.499)
OP2: (45.893,25.008,61.074)
C3': (41.485,26.880,59.042)
C1': (41.765,25.851,56.919)
C5': (43.931,27.706,59.177)
O6: (41.279,19.903,56.244)
O4': (42.973,26.491,57.291)
C8: (42.764,23.653,57.737)
C2: (39.727,22.715,54.724)
C6: (41.044,21.096,56.010)
C5: (41.635,22.250,56.594)
C4: (41.208,23.495,56.182)
P: (45.741,26.407,60.574)
C4': (42.699,27.455,58.336)
C2': (40.677,26.286,57.897)
O2': (39.825,27.222,57.286)
N1: (40.081,21.436,55.068)
N2: (38.770,22.826,53.790)
N3: (40.269,23.800,55.256)
N7: (42.618,22.364,57.570)
N9: (41.926,24.399,56.941)
O5': (44.283,26.548,59.931)
O3': (40.731,27.866,59.726)
OP1: (39.739,36.901,69.861)
OP2: (41.054,37.693,67.803)
C3': (40.034,32.382,67.281)
C1': (38.718,32.886,65.400)
C5': (39.217,34.462,68.570)
O6: (42.380,34.856,61.108)
O4': (38.323,33.747,66.451)
C8: (40.141,34.876,64.744)
C2: (40.531,31.859,61.629)
C6: (41.625,34.052,61.676)
C5: (40.944,34.207,62.899)
C4: (40.131,33.191,63.342)
P: (39.873,36.992,68.380)
C4': (38.883,33.275,67.702)
C2': (39.487,31.726,66.027)
O2': (38.608,30.660,66.332)
N1: (41.355,32.816,61.094)
N2: (40.410,30.728,60.927)
N3: (39.880,32.001,62.766)
N7: (40.943,35.261,63.794)
N9: (39.619,33.627,64.530)
O5': (39.855,35.494,67.819)
O3': (40.337,31.424,68.281)
Image (generated by PyMOL):
PyMOL image
show in jmol