ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OGE:A114:A582

Extra

PDB:
ATOM 1 O3' U A 113 46.886 25.968 59.552 1.00 79.38 O
ATOM 2 P G A 114 45.772 25.879 60.712 1.00 70.47 P
ATOM 3 OP1 G A 114 45.967 27.056 61.572 1.00 84.80 O
ATOM 4 OP2 G A 114 45.865 24.528 61.325 1.00 86.53 O
ATOM 5 O5' G A 114 44.404 26.015 59.899 1.00 65.46 O
ATOM 6 C5' G A 114 44.146 27.175 59.124 1.00 73.49 C
ATOM 7 C4' G A 114 42.998 26.973 58.173 1.00 70.88 C
ATOM 8 O4' G A 114 43.344 25.981 57.175 1.00 74.75 O
ATOM 9 C3' G A 114 41.708 26.449 58.777 1.00 74.93 C
ATOM 10 O3' G A 114 40.963 27.457 59.438 1.00 83.31 O
ATOM 11 C2' G A 114 40.996 25.859 57.559 1.00 79.42 C
ATOM 12 O2' G A 114 40.384 26.886 56.780 1.00 74.72 O
ATOM 13 C1' G A 114 42.179 25.285 56.768 1.00 78.78 C
ATOM 14 N9 G A 114 42.368 23.842 57.030 1.00 79.09 N
ATOM 15 C8 G A 114 43.229 23.267 57.938 1.00 80.61 C
ATOM 16 N7 G A 114 43.162 21.963 57.957 1.00 79.94 N
ATOM 17 C5 G A 114 42.198 21.657 57.008 1.00 79.04 C
ATOM 18 C6 G A 114 41.703 20.398 56.593 1.00 83.24 C
ATOM 19 O6 G A 114 42.028 19.266 56.990 1.00 83.18 O
ATOM 20 N1 G A 114 40.732 20.557 55.611 1.00 81.47 N
ATOM 21 C2 G A 114 40.301 21.749 55.097 1.00 73.41 C
ATOM 22 N2 G A 114 39.356 21.687 54.153 1.00 77.57 N
ATOM 23 N3 G A 114 40.761 22.918 55.472 1.00 74.05 N
ATOM 24 C4 G A 114 41.700 22.801 56.425 1.00 76.00 C
ATOM 25 P G A 115 39.673 27.070 60.299 1.00 80.06 P
ATOM 26 OP1 G A 115 39.045 28.342 60.730 1.00 71.79 O
ATOM 27 OP2 G A 115 40.123 26.099 61.335 1.00 72.47 O
ATOM 28 O5' G A 115 38.742 26.343 59.227 1.00 78.78 O
TER

ATOM 1 O3' U B 581 38.805 37.401 68.203 1.00 96.01 O
ATOM 2 P G B 582 40.092 36.544 68.629 1.00 91.78 P
ATOM 3 OP1 G B 582 39.955 36.229 70.073 1.00110.08 O
ATOM 4 OP2 G B 582 41.287 37.294 68.172 1.00116.13 O
ATOM 5 O5' G B 582 39.924 35.213 67.765 1.00104.95 O
ATOM 6 C5' G B 582 38.796 34.363 67.945 1.00 97.44 C
ATOM 7 C4' G B 582 38.857 33.137 67.056 1.00 93.63 C
ATOM 8 O4' G B 582 38.599 33.500 65.676 1.00 99.72 O
ATOM 9 C3' G B 582 40.186 32.414 66.984 1.00 81.43 C
ATOM 10 O3' G B 582 40.437 31.608 68.108 1.00 89.79 O
ATOM 11 C2' G B 582 40.041 31.624 65.703 1.00 84.66 C
ATOM 12 O2' G B 582 39.172 30.522 65.905 1.00 87.77 O
ATOM 13 C1' G B 582 39.324 32.641 64.822 1.00 94.97 C
ATOM 14 N9 G B 582 40.274 33.447 64.040 1.00100.21 N
ATOM 15 C8 G B 582 40.723 34.723 64.280 1.00101.28 C
ATOM 16 N7 G B 582 41.576 35.136 63.382 1.00101.60 N
ATOM 17 C5 G B 582 41.694 34.065 62.502 1.00104.53 C
ATOM 18 C6 G B 582 42.478 33.913 61.327 1.00105.77 C
ATOM 19 O6 G B 582 43.258 34.732 60.809 1.00107.43 O
ATOM 20 N1 G B 582 42.278 32.651 60.760 1.00103.87 N
ATOM 21 C2 G B 582 41.447 31.670 61.256 1.00100.38 C
ATOM 22 N2 G B 582 41.377 30.516 60.580 1.00 99.56 N
ATOM 23 N3 G B 582 40.723 31.803 62.345 1.00100.68 N
ATOM 24 C4 G B 582 40.895 33.017 62.903 1.00103.23 C
ATOM 25 P U B 583 41.944 31.221 68.473 1.00 99.33 P
ATOM 26 OP1 U B 583 41.888 30.177 69.534 1.00102.20 O
ATOM 27 OP2 U B 583 42.667 32.486 68.754 1.00 88.99 O
ATOM 28 O5' U B 583 42.469 30.593 67.111 1.00 99.83 O
TER

Atoms:
OP1: (45.967,27.056,61.572)
OP2: (45.865,24.528,61.325)
C3': (41.708,26.449,58.777)
C1': (42.179,25.285,56.768)
C5': (44.146,27.175,59.124)
O6: (42.028,19.266,56.990)
O4': (43.344,25.981,57.175)
C8: (43.229,23.267,57.938)
C2: (40.301,21.749,55.097)
C6: (41.703,20.398,56.593)
C5: (42.198,21.657,57.008)
C4: (41.700,22.801,56.425)
P: (45.772,25.879,60.712)
C4': (42.998,26.973,58.173)
C2': (40.996,25.859,57.559)
O2': (40.384,26.886,56.780)
N1: (40.732,20.557,55.611)
N2: (39.356,21.687,54.153)
N3: (40.761,22.918,55.472)
N7: (43.162,21.963,57.957)
N9: (42.368,23.842,57.030)
O5': (44.404,26.015,59.899)
O3': (40.963,27.457,59.438)
OP1: (39.955,36.229,70.073)
OP2: (41.287,37.294,68.172)
C3': (40.186,32.414,66.984)
C1': (39.324,32.641,64.822)
C5': (38.796,34.363,67.945)
O6: (43.258,34.732,60.809)
O4': (38.599,33.500,65.676)
C8: (40.723,34.723,64.280)
C2: (41.447,31.670,61.256)
C6: (42.478,33.913,61.327)
C5: (41.694,34.065,62.502)
C4: (40.895,33.017,62.903)
P: (40.092,36.544,68.629)
C4': (38.857,33.137,67.056)
C2': (40.041,31.624,65.703)
O2': (39.172,30.522,65.905)
N1: (42.278,32.651,60.760)
N2: (41.377,30.516,60.580)
N3: (40.723,31.803,62.345)
N7: (41.576,35.136,63.382)
N9: (40.274,33.447,64.040)
O5': (39.924,35.213,67.765)
O3': (40.437,31.608,68.108)
Image (generated by PyMOL):
PyMOL image
show in jmol