ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1E:A644:A709

Extra

PDB:
ATOM 1 O3' A A 643 -7.052 125.671 71.872 1.00 66.76 O
ATOM 2 P G A 644 -6.429 124.308 71.328 1.00 72.60 P
ATOM 3 OP1 G A 644 -5.204 124.667 70.579 1.00 75.34 O
ATOM 4 OP2 G A 644 -7.526 123.560 70.664 1.00 74.18 O
ATOM 5 O5' G A 644 -6.009 123.527 72.659 1.00 75.41 O
ATOM 6 C5' G A 644 -6.852 122.508 73.185 1.00 73.30 C
ATOM 7 C4' G A 644 -6.072 121.547 74.068 1.00 69.08 C
ATOM 8 O4' G A 644 -4.984 120.949 73.322 1.00 68.56 O
ATOM 9 C3' G A 644 -5.399 122.172 75.281 1.00 70.66 C
ATOM 10 O3' G A 644 -6.333 122.322 76.334 1.00 77.47 O
ATOM 11 C2' G A 644 -4.367 121.101 75.591 1.00 68.30 C
ATOM 12 O2' G A 644 -4.937 119.932 76.145 1.00 82.52 O
ATOM 13 C1' G A 644 -3.867 120.824 74.179 1.00 68.96 C
ATOM 14 N9 G A 644 -2.880 121.815 73.791 1.00 68.81 N
ATOM 15 C8 G A 644 -3.003 122.784 72.828 1.00 69.69 C
ATOM 16 N7 G A 644 -1.943 123.535 72.723 1.00 78.75 N
ATOM 17 C5 G A 644 -1.069 123.035 73.683 1.00 78.04 C
ATOM 18 C6 G A 644 0.238 123.448 74.034 1.00 77.58 C
ATOM 19 O6 G A 644 0.905 124.373 73.541 1.00 88.87 O
ATOM 20 N1 G A 644 0.763 122.667 75.063 1.00 62.50 N
ATOM 21 C2 G A 644 0.109 121.618 75.664 1.00 67.86 C
ATOM 22 N2 G A 644 0.771 120.971 76.632 1.00 72.60 N
ATOM 23 N3 G A 644 -1.113 121.222 75.344 1.00 76.31 N
ATOM 24 C4 G A 644 -1.636 121.976 74.350 1.00 74.08 C
ATOM 25 P G A 645 -6.244 123.588 77.309 1.00 68.96 P
ATOM 26 OP1 G A 645 -7.426 123.537 78.204 1.00 59.36 O
ATOM 27 OP2 G A 645 -6.002 124.800 76.491 1.00 66.04 O
ATOM 28 O5' G A 645 -4.932 123.264 78.166 1.00 46.87 O
TER

ATOM 1 O3' G B 708 -15.403 114.643 81.809 1.00 49.28 O
ATOM 2 P G B 709 -16.226 115.956 81.364 1.00 52.10 P
ATOM 3 OP1 G B 709 -17.350 116.164 82.309 1.00 50.61 O
ATOM 4 OP2 G B 709 -16.499 115.914 79.902 1.00 44.77 O
ATOM 5 O5' G B 709 -15.110 117.066 81.629 1.00 49.07 O
ATOM 6 C5' G B 709 -15.079 118.250 80.867 1.00 46.91 C
ATOM 7 C4' G B 709 -13.653 118.755 80.849 1.00 49.88 C
ATOM 8 O4' G B 709 -12.835 117.772 80.191 1.00 47.91 O
ATOM 9 C3' G B 709 -13.449 120.046 80.076 1.00 54.65 C
ATOM 10 O3' G B 709 -13.401 121.115 81.005 1.00 52.26 O
ATOM 11 C2' G B 709 -12.097 119.868 79.403 1.00 55.69 C
ATOM 12 O2' G B 709 -11.019 120.175 80.264 1.00 53.69 O
ATOM 13 C1' G B 709 -12.104 118.376 79.142 1.00 54.98 C
ATOM 14 N9 G B 709 -12.637 118.007 77.829 1.00 54.43 N
ATOM 15 C8 G B 709 -13.765 117.282 77.520 1.00 51.88 C
ATOM 16 N7 G B 709 -13.935 117.106 76.237 1.00 44.83 N
ATOM 17 C5 G B 709 -12.853 117.763 75.663 1.00 52.22 C
ATOM 18 C6 G B 709 -12.491 117.932 74.306 1.00 63.09 C
ATOM 19 O6 G B 709 -13.079 117.521 73.300 1.00 70.06 O
ATOM 20 N1 G B 709 -11.315 118.659 74.164 1.00 52.07 N
ATOM 21 C2 G B 709 -10.580 119.156 75.211 1.00 51.17 C
ATOM 22 N2 G B 709 -9.473 119.830 74.893 1.00 72.80 N
ATOM 23 N3 G B 709 -10.900 119.013 76.484 1.00 50.16 N
ATOM 24 C4 G B 709 -12.046 118.312 76.631 1.00 53.28 C
ATOM 25 P C B 710 -14.097 122.491 80.604 1.00 56.80 P
ATOM 26 OP1 C B 710 -14.065 123.334 81.830 1.00 62.30 O
ATOM 27 OP2 C B 710 -15.393 122.165 79.955 1.00 55.50 O
ATOM 28 O5' C B 710 -13.103 123.059 79.465 1.00 51.57 O
TER

Atoms:
OP1: (-5.204,124.667,70.579)
OP2: (-7.526,123.560,70.664)
C3': (-5.399,122.172,75.281)
C1': (-3.867,120.824,74.179)
C5': (-6.852,122.508,73.185)
O6: (0.905,124.373,73.541)
O4': (-4.984,120.949,73.322)
C8: (-3.003,122.784,72.828)
C2: (0.109,121.618,75.664)
C6: (0.238,123.448,74.034)
C5: (-1.069,123.035,73.683)
C4: (-1.636,121.976,74.350)
P: (-6.429,124.308,71.328)
C4': (-6.072,121.547,74.068)
C2': (-4.367,121.101,75.591)
O2': (-4.937,119.932,76.145)
N1: (0.763,122.667,75.063)
N2: (0.771,120.971,76.632)
N3: (-1.113,121.222,75.344)
N7: (-1.943,123.535,72.723)
N9: (-2.880,121.815,73.791)
O5': (-6.009,123.527,72.659)
O3': (-6.333,122.322,76.334)
OP1: (-17.350,116.164,82.309)
OP2: (-16.499,115.914,79.902)
C3': (-13.449,120.046,80.076)
C1': (-12.104,118.376,79.142)
C5': (-15.079,118.250,80.867)
O6: (-13.079,117.521,73.300)
O4': (-12.835,117.772,80.191)
C8: (-13.765,117.282,77.520)
C2: (-10.580,119.156,75.211)
C6: (-12.491,117.932,74.306)
C5: (-12.853,117.763,75.663)
C4: (-12.046,118.312,76.631)
P: (-16.226,115.956,81.364)
C4': (-13.653,118.755,80.849)
C2': (-12.097,119.868,79.403)
O2': (-11.019,120.175,80.264)
N1: (-11.315,118.659,74.164)
N2: (-9.473,119.830,74.893)
N3: (-10.900,119.013,76.484)
N7: (-13.935,117.106,76.237)
N9: (-12.637,118.007,77.829)
O5': (-15.110,117.066,81.629)
O3': (-13.401,121.115,81.005)
Image (generated by PyMOL):
PyMOL image
show in jmol