ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1WSU:G16:G4

Extra

PDB:
ATOM 1 O3' A A 15 7.911 9.202 29.728 1.00108.46 O
ATOM 2 P A A 16 8.158 10.046 31.069 1.00110.38 P
ATOM 3 OP1 A A 16 6.910 10.788 31.379 1.00112.07 O
ATOM 4 OP2 A A 16 9.438 10.787 30.929 1.00108.85 O
ATOM 5 O5' A A 16 8.348 8.923 32.178 1.00110.02 O
ATOM 6 C5' A A 16 8.712 9.266 33.503 1.00108.54 C
ATOM 7 C4' A A 16 8.720 8.036 34.373 1.00108.12 C
ATOM 8 O4' A A 16 9.686 7.077 33.872 1.00107.20 O
ATOM 9 C3' A A 16 9.175 8.297 35.791 1.00108.78 C
ATOM 10 O3' A A 16 8.084 8.804 36.540 1.00107.57 O
ATOM 11 C2' A A 16 9.639 6.919 36.250 1.00108.62 C
ATOM 12 O2' A A 16 8.579 6.094 36.688 1.00111.20 O
ATOM 13 C1' A A 16 10.244 6.355 34.960 1.00110.32 C
ATOM 14 N9 A A 16 11.702 6.473 34.898 1.00113.83 N
ATOM 15 C8 A A 16 12.626 5.925 35.757 1.00114.68 C
ATOM 16 N7 A A 16 13.870 6.177 35.428 1.00112.16 N
ATOM 17 C5 A A 16 13.760 6.949 34.279 1.00111.52 C
ATOM 18 C6 A A 16 14.721 7.540 33.442 1.00111.02 C
ATOM 19 N6 A A 16 16.035 7.435 33.632 1.00109.05 N
ATOM 20 N1 A A 16 14.278 8.253 32.384 1.00113.82 N
ATOM 21 C2 A A 16 12.956 8.358 32.189 1.00114.50 C
ATOM 22 N3 A A 16 11.956 7.846 32.901 1.00112.88 N
ATOM 23 C4 A A 16 12.430 7.144 33.945 1.00112.82 C
ATOM 24 P C A 17 8.163 10.290 37.128 1.00106.05 P
ATOM 25 OP1 C A 17 6.900 10.571 37.856 1.00108.51 O
ATOM 26 OP2 C A 17 8.593 11.185 36.023 1.00105.81 O
ATOM 27 O5' C A 17 9.336 10.185 38.197 1.00104.12 O
TER

ATOM 1 O3' G B 3 25.349 7.491 36.022 1.00108.85 O
ATOM 2 P U B 4 25.040 6.054 35.377 1.00109.91 P
ATOM 3 OP1 U B 4 26.178 5.160 35.719 1.00113.68 O
ATOM 4 OP2 U B 4 24.676 6.268 33.950 1.00104.70 O
ATOM 5 O5' U B 4 23.750 5.544 36.167 1.00109.13 O
ATOM 6 C5' U B 4 23.836 5.158 37.541 1.00101.31 C
ATOM 7 C4' U B 4 22.462 4.831 38.090 1.00 97.50 C
ATOM 8 O4' U B 4 21.624 6.017 38.028 1.00 96.96 O
ATOM 9 C3' U B 4 21.659 3.780 37.338 1.00 96.98 C
ATOM 10 O3' U B 4 22.010 2.457 37.724 1.00 99.60 O
ATOM 11 C2' U B 4 20.236 4.111 37.766 1.00 95.03 C
ATOM 12 O2' U B 4 19.924 3.624 39.057 1.00 93.24 O
ATOM 13 C1' U B 4 20.278 5.639 37.775 1.00 92.16 C
ATOM 14 N1 U B 4 19.877 6.191 36.474 1.00 85.25 N
ATOM 15 C2 U B 4 18.528 6.254 36.197 1.00 79.98 C
ATOM 16 O2 U B 4 17.673 5.901 36.989 1.00 76.26 O
ATOM 17 N3 U B 4 18.218 6.745 34.956 1.00 78.33 N
ATOM 18 C4 U B 4 19.099 7.175 33.988 1.00 78.37 C
ATOM 19 O4 U B 4 18.663 7.571 32.906 1.00 79.60 O
ATOM 20 C5 U B 4 20.477 7.090 34.357 1.00 79.45 C
ATOM 21 C6 U B 4 20.810 6.615 35.558 1.00 81.56 C
ATOM 22 P U B 5 21.776 1.241 36.697 1.00101.68 P
ATOM 23 OP1 U B 5 22.258 -0.002 37.358 1.00102.80 O
ATOM 24 OP2 U B 5 22.332 1.637 35.376 1.00 98.28 O
ATOM 25 O5' U B 5 20.191 1.145 36.551 1.00104.91 O
TER

Atoms:
OP1: (6.910,10.788,31.379)
OP2: (9.438,10.787,30.929)
C3': (9.175,8.297,35.791)
C1': (10.244,6.355,34.960)
C5': (8.712,9.266,33.503)
O4': (9.686,7.077,33.872)
C8: (12.626,5.925,35.757)
O2': (8.579,6.094,36.688)
C6: (14.721,7.540,33.442)
C5: (13.760,6.949,34.279)
C4: (12.430,7.144,33.945)
P: (8.158,10.046,31.069)
C4': (8.720,8.036,34.373)
C2': (9.639,6.919,36.250)
C2: (12.956,8.358,32.189)
N1: (14.278,8.253,32.384)
N3: (11.956,7.846,32.901)
N6: (16.035,7.435,33.632)
N7: (13.870,6.177,35.428)
N9: (11.702,6.473,34.898)
O5': (8.348,8.923,32.178)
O3': (8.084,8.804,36.540)
C4: (19.099,7.175,33.988)
N3: (18.218,6.745,34.956)
OP1: (26.178,5.160,35.719)
OP2: (24.676,6.268,33.950)
C2: (18.528,6.254,36.197)
C1': (20.278,5.639,37.775)
C3': (21.659,3.780,37.338)
O5': (23.750,5.544,36.167)
O4': (21.624,6.017,38.028)
C5': (23.836,5.158,37.541)
P: (25.040,6.054,35.377)
C4': (22.462,4.831,38.090)
C2': (20.236,4.111,37.766)
O2': (19.924,3.624,39.057)
N1: (19.877,6.191,36.474)
O4: (18.663,7.571,32.906)
O2: (17.673,5.901,36.989)
C6: (20.810,6.615,35.558)
C5: (20.477,7.090,34.357)
O3': (22.010,2.457,37.724)
Image (generated by PyMOL):
PyMOL image
show in jmol