Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A1376:A1378
Extra
PDB:
ATOM 1 O3' A A1375 -53.807 101.066 77.424 1.00 8.58 O
ATOM 2 P C A1376 -54.596 102.332 76.837 1.00 30.50 P
ATOM 3 OP1 C A1376 -56.030 101.922 76.761 1.00 25.41 O
ATOM 4 OP2 C A1376 -53.871 102.786 75.609 1.00 23.34 O
ATOM 5 O5' C A1376 -54.438 103.438 77.974 1.00 17.49 O
ATOM 6 C5' C A1376 -55.018 103.237 79.284 1.00 17.49 C
ATOM 7 C4' C A1376 -54.671 104.390 80.190 1.00 17.49 C
ATOM 8 O4' C A1376 -53.264 104.339 80.556 1.00 17.49 O
ATOM 9 C3' C A1376 -54.903 105.734 79.528 1.00 17.49 C
ATOM 10 O3' C A1376 -55.364 106.653 80.503 1.00 17.49 O
ATOM 11 C2' C A1376 -53.509 106.108 79.043 1.00 17.49 C
ATOM 12 O2' C A1376 -53.322 107.496 78.876 1.00 17.49 O
ATOM 13 C1' C A1376 -52.639 105.535 80.161 1.00 17.49 C
ATOM 14 N1 C A1376 -51.247 105.248 79.783 1.00 21.66 N
ATOM 15 C2 C A1376 -50.217 105.809 80.541 1.00 23.38 C
ATOM 16 O2 C A1376 -50.503 106.481 81.547 1.00 24.58 O
ATOM 17 N3 C A1376 -48.938 105.608 80.169 1.00 24.60 N
ATOM 18 C4 C A1376 -48.669 104.878 79.091 1.00 24.23 C
ATOM 19 N4 C A1376 -47.385 104.743 78.720 1.00 24.85 N
ATOM 20 C5 C A1376 -49.697 104.261 78.329 1.00 24.09 C
ATOM 21 C6 C A1376 -50.959 104.470 78.706 1.00 21.42 C
ATOM 22 P C A1377 -56.940 106.835 80.738 1.00 51.65 P
ATOM 23 OP1 C A1377 -57.653 106.562 79.461 1.00 80.21 O
ATOM 24 OP2 C A1377 -57.128 108.135 81.423 1.00 82.32 O
ATOM 25 O5' C A1377 -57.322 105.669 81.750 1.00 10.97 O
TER
ATOM 1 O3' C B1377 -56.665 102.044 84.110 1.00 14.72 O
ATOM 2 P G B1378 -55.255 101.824 84.840 1.00 39.57 P
ATOM 3 OP1 G B1378 -55.416 100.588 85.640 1.00 28.94 O
ATOM 4 OP2 G B1378 -54.828 103.070 85.509 1.00 30.23 O
ATOM 5 O5' G B1378 -54.256 101.529 83.639 1.00 6.74 O
ATOM 6 C5' G B1378 -54.516 100.433 82.760 1.00 6.60 C
ATOM 7 C4' G B1378 -53.260 100.014 82.062 1.00 6.60 C
ATOM 8 O4' G B1378 -52.786 101.147 81.306 1.00 6.60 O
ATOM 9 C3' G B1378 -52.083 99.606 82.938 1.00 6.60 C
ATOM 10 O3' G B1378 -52.092 98.222 83.305 1.00 6.60 O
ATOM 11 C2' G B1378 -50.907 99.883 82.021 1.00 6.60 C
ATOM 12 O2' G B1378 -50.753 98.787 81.140 1.00 8.34 O
ATOM 13 C1' G B1378 -51.376 101.144 81.282 1.00 6.60 C
ATOM 14 N9 G B1378 -50.925 102.336 81.987 1.00 5.17 N
ATOM 15 C8 G B1378 -51.666 103.120 82.834 1.00 5.60 C
ATOM 16 N7 G B1378 -50.956 104.045 83.416 1.00 6.16 N
ATOM 17 C5 G B1378 -49.681 103.873 82.900 1.00 6.64 C
ATOM 18 C6 G B1378 -48.488 104.572 83.172 1.00 8.49 C
ATOM 19 O6 G B1378 -48.307 105.493 83.971 1.00 8.78 O
ATOM 20 N1 G B1378 -47.432 104.092 82.415 1.00 9.25 N
ATOM 21 C2 G B1378 -47.522 103.056 81.527 1.00 8.85 C
ATOM 22 N2 G B1378 -46.398 102.714 80.904 1.00 9.99 N
ATOM 23 N3 G B1378 -48.631 102.395 81.270 1.00 7.61 N
ATOM 24 C4 G B1378 -49.659 102.850 81.989 1.00 5.90 C
ATOM 25 P C B1379 -51.655 97.783 84.798 1.00 27.66 P
ATOM 26 OP1 C B1379 -51.759 96.303 84.851 1.00 45.52 O
ATOM 27 OP2 C B1379 -52.402 98.613 85.796 1.00 45.81 O
ATOM 28 O5' C B1379 -50.113 98.161 84.893 1.00 6.19 O
TER
ATOM 2 P C A1376 -54.596 102.332 76.837 1.00 30.50 P
ATOM 3 OP1 C A1376 -56.030 101.922 76.761 1.00 25.41 O
ATOM 4 OP2 C A1376 -53.871 102.786 75.609 1.00 23.34 O
ATOM 5 O5' C A1376 -54.438 103.438 77.974 1.00 17.49 O
ATOM 6 C5' C A1376 -55.018 103.237 79.284 1.00 17.49 C
ATOM 7 C4' C A1376 -54.671 104.390 80.190 1.00 17.49 C
ATOM 8 O4' C A1376 -53.264 104.339 80.556 1.00 17.49 O
ATOM 9 C3' C A1376 -54.903 105.734 79.528 1.00 17.49 C
ATOM 10 O3' C A1376 -55.364 106.653 80.503 1.00 17.49 O
ATOM 11 C2' C A1376 -53.509 106.108 79.043 1.00 17.49 C
ATOM 12 O2' C A1376 -53.322 107.496 78.876 1.00 17.49 O
ATOM 13 C1' C A1376 -52.639 105.535 80.161 1.00 17.49 C
ATOM 14 N1 C A1376 -51.247 105.248 79.783 1.00 21.66 N
ATOM 15 C2 C A1376 -50.217 105.809 80.541 1.00 23.38 C
ATOM 16 O2 C A1376 -50.503 106.481 81.547 1.00 24.58 O
ATOM 17 N3 C A1376 -48.938 105.608 80.169 1.00 24.60 N
ATOM 18 C4 C A1376 -48.669 104.878 79.091 1.00 24.23 C
ATOM 19 N4 C A1376 -47.385 104.743 78.720 1.00 24.85 N
ATOM 20 C5 C A1376 -49.697 104.261 78.329 1.00 24.09 C
ATOM 21 C6 C A1376 -50.959 104.470 78.706 1.00 21.42 C
ATOM 22 P C A1377 -56.940 106.835 80.738 1.00 51.65 P
ATOM 23 OP1 C A1377 -57.653 106.562 79.461 1.00 80.21 O
ATOM 24 OP2 C A1377 -57.128 108.135 81.423 1.00 82.32 O
ATOM 25 O5' C A1377 -57.322 105.669 81.750 1.00 10.97 O
TER
ATOM 1 O3' C B1377 -56.665 102.044 84.110 1.00 14.72 O
ATOM 2 P G B1378 -55.255 101.824 84.840 1.00 39.57 P
ATOM 3 OP1 G B1378 -55.416 100.588 85.640 1.00 28.94 O
ATOM 4 OP2 G B1378 -54.828 103.070 85.509 1.00 30.23 O
ATOM 5 O5' G B1378 -54.256 101.529 83.639 1.00 6.74 O
ATOM 6 C5' G B1378 -54.516 100.433 82.760 1.00 6.60 C
ATOM 7 C4' G B1378 -53.260 100.014 82.062 1.00 6.60 C
ATOM 8 O4' G B1378 -52.786 101.147 81.306 1.00 6.60 O
ATOM 9 C3' G B1378 -52.083 99.606 82.938 1.00 6.60 C
ATOM 10 O3' G B1378 -52.092 98.222 83.305 1.00 6.60 O
ATOM 11 C2' G B1378 -50.907 99.883 82.021 1.00 6.60 C
ATOM 12 O2' G B1378 -50.753 98.787 81.140 1.00 8.34 O
ATOM 13 C1' G B1378 -51.376 101.144 81.282 1.00 6.60 C
ATOM 14 N9 G B1378 -50.925 102.336 81.987 1.00 5.17 N
ATOM 15 C8 G B1378 -51.666 103.120 82.834 1.00 5.60 C
ATOM 16 N7 G B1378 -50.956 104.045 83.416 1.00 6.16 N
ATOM 17 C5 G B1378 -49.681 103.873 82.900 1.00 6.64 C
ATOM 18 C6 G B1378 -48.488 104.572 83.172 1.00 8.49 C
ATOM 19 O6 G B1378 -48.307 105.493 83.971 1.00 8.78 O
ATOM 20 N1 G B1378 -47.432 104.092 82.415 1.00 9.25 N
ATOM 21 C2 G B1378 -47.522 103.056 81.527 1.00 8.85 C
ATOM 22 N2 G B1378 -46.398 102.714 80.904 1.00 9.99 N
ATOM 23 N3 G B1378 -48.631 102.395 81.270 1.00 7.61 N
ATOM 24 C4 G B1378 -49.659 102.850 81.989 1.00 5.90 C
ATOM 25 P C B1379 -51.655 97.783 84.798 1.00 27.66 P
ATOM 26 OP1 C B1379 -51.759 96.303 84.851 1.00 45.52 O
ATOM 27 OP2 C B1379 -52.402 98.613 85.796 1.00 45.81 O
ATOM 28 O5' C B1379 -50.113 98.161 84.893 1.00 6.19 O
TER
Atoms:
C2: (-50.217,105.809,80.541)
OP1: (-56.030,101.922,76.761)
OP2: (-53.871,102.786,75.609)
C4: (-48.669,104.878,79.091)
O5': (-54.438,103.438,77.974)
C3': (-54.903,105.734,79.528)
C1': (-52.639,105.535,80.161)
O4': (-53.264,104.339,80.556)
C5': (-55.018,103.237,79.284)
P: (-54.596,102.332,76.837)
O2: (-50.503,106.481,81.547)
C4': (-54.671,104.390,80.190)
C2': (-53.509,106.108,79.043)
O2': (-53.322,107.496,78.876)
N1: (-51.247,105.248,79.783)
N3: (-48.938,105.608,80.169)
N4: (-47.385,104.743,78.720)
C6: (-50.959,104.470,78.706)
C5: (-49.697,104.261,78.329)
O3': (-55.364,106.653,80.503)
OP1: (-56.030,101.922,76.761)
OP2: (-53.871,102.786,75.609)
C4: (-48.669,104.878,79.091)
O5': (-54.438,103.438,77.974)
C3': (-54.903,105.734,79.528)
C1': (-52.639,105.535,80.161)
O4': (-53.264,104.339,80.556)
C5': (-55.018,103.237,79.284)
P: (-54.596,102.332,76.837)
O2: (-50.503,106.481,81.547)
C4': (-54.671,104.390,80.190)
C2': (-53.509,106.108,79.043)
O2': (-53.322,107.496,78.876)
N1: (-51.247,105.248,79.783)
N3: (-48.938,105.608,80.169)
N4: (-47.385,104.743,78.720)
C6: (-50.959,104.470,78.706)
C5: (-49.697,104.261,78.329)
O3': (-55.364,106.653,80.503)
OP1: (-55.416,100.588,85.640)
OP2: (-54.828,103.070,85.509)
C3': (-52.083,99.606,82.938)
C1': (-51.376,101.144,81.282)
C5': (-54.516,100.433,82.760)
O6: (-48.307,105.493,83.971)
O4': (-52.786,101.147,81.306)
C8: (-51.666,103.120,82.834)
C2: (-47.522,103.056,81.527)
C6: (-48.488,104.572,83.172)
C5: (-49.681,103.873,82.900)
C4: (-49.659,102.850,81.989)
P: (-55.255,101.824,84.840)
C4': (-53.260,100.014,82.062)
C2': (-50.907,99.883,82.021)
O2': (-50.753,98.787,81.140)
N1: (-47.432,104.092,82.415)
N2: (-46.398,102.714,80.904)
N3: (-48.631,102.395,81.270)
N7: (-50.956,104.045,83.416)
N9: (-50.925,102.336,81.987)
O5': (-54.256,101.529,83.639)
O3': (-52.092,98.222,83.305)
OP2: (-54.828,103.070,85.509)
C3': (-52.083,99.606,82.938)
C1': (-51.376,101.144,81.282)
C5': (-54.516,100.433,82.760)
O6: (-48.307,105.493,83.971)
O4': (-52.786,101.147,81.306)
C8: (-51.666,103.120,82.834)
C2: (-47.522,103.056,81.527)
C6: (-48.488,104.572,83.172)
C5: (-49.681,103.873,82.900)
C4: (-49.659,102.850,81.989)
P: (-55.255,101.824,84.840)
C4': (-53.260,100.014,82.062)
C2': (-50.907,99.883,82.021)
O2': (-50.753,98.787,81.140)
N1: (-47.432,104.092,82.415)
N2: (-46.398,102.714,80.904)
N3: (-48.631,102.395,81.270)
N7: (-50.956,104.045,83.416)
N9: (-50.925,102.336,81.987)
O5': (-54.256,101.529,83.639)
O3': (-52.092,98.222,83.305)
Image (generated by PyMOL):