ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5B:21618:21620

Extra

PDB:
ATOM 1 O3' A A1617 -64.838 -19.120 70.675 1.00 76.13 O
ATOM 2 P C A1618 -65.237 -20.475 71.406 1.00 77.48 P
ATOM 3 OP1 C A1618 -66.105 -21.230 70.481 1.00 78.40 O
ATOM 4 OP2 C A1618 -65.770 -20.105 72.728 1.00 77.40 O
ATOM 5 O5' C A1618 -63.835 -21.212 71.568 1.00 77.30 O
ATOM 6 C5' C A1618 -62.807 -21.036 70.607 1.00 76.83 C
ATOM 7 C4' C A1618 -61.450 -21.301 71.197 1.00 76.37 C
ATOM 8 O4' C A1618 -61.059 -20.170 72.025 1.00 75.48 O
ATOM 9 C3' C A1618 -61.362 -22.533 72.090 1.00 77.01 C
ATOM 10 O3' C A1618 -60.098 -23.172 71.896 1.00 76.90 O
ATOM 11 C2' C A1618 -61.429 -21.927 73.492 1.00 76.59 C
ATOM 12 O2' C A1618 -60.860 -22.713 74.511 1.00 76.78 O
ATOM 13 C1' C A1618 -60.673 -20.631 73.298 1.00 75.51 C
ATOM 14 N1 C A1618 -61.007 -19.608 74.282 1.00 74.99 N
ATOM 15 C2 C A1618 -60.051 -19.133 75.157 1.00 74.29 C
ATOM 16 O2 C A1618 -58.902 -19.588 75.032 1.00 74.11 O
ATOM 17 N3 C A1618 -60.402 -18.197 76.083 1.00 73.86 N
ATOM 18 C4 C A1618 -61.662 -17.740 76.150 1.00 74.11 C
ATOM 19 N4 C A1618 -62.033 -16.822 77.047 1.00 73.72 N
ATOM 20 C5 C A1618 -62.655 -18.223 75.260 1.00 74.83 C
ATOM 21 C6 C A1618 -62.284 -19.156 74.365 1.00 75.25 C
ATOM 22 P C A1619 -59.945 -24.397 70.851 1.00 75.69 P
ATOM 23 OP1 C A1619 -61.289 -25.045 70.719 1.00 76.68 O
ATOM 24 OP2 C A1619 -58.801 -25.220 71.306 1.00 75.71 O
ATOM 25 O5' C A1619 -59.562 -23.659 69.503 1.00 75.18 O
TER

ATOM 1 O3' C B1619 -58.396 -20.328 66.978 1.00 72.96 O
ATOM 2 P G B1620 -57.760 -19.128 67.832 1.00 72.97 P
ATOM 3 OP1 G B1620 -57.190 -18.124 66.862 1.00 72.30 O
ATOM 4 OP2 G B1620 -56.843 -19.754 68.842 1.00 72.87 O
ATOM 5 O5' G B1620 -59.047 -18.504 68.562 1.00 73.05 O
ATOM 6 C5' G B1620 -60.018 -17.757 67.833 1.00 73.10 C
ATOM 7 C4' G B1620 -60.868 -16.901 68.743 1.00 72.88 C
ATOM 8 O4' G B1620 -61.150 -17.613 69.982 1.00 73.26 O
ATOM 9 C3' G B1620 -60.251 -15.596 69.199 1.00 71.89 C
ATOM 10 O3' G B1620 -60.374 -14.566 68.246 1.00 71.50 O
ATOM 11 C2' G B1620 -61.005 -15.313 70.476 1.00 71.92 C
ATOM 12 O2' G B1620 -62.299 -14.831 70.174 1.00 72.22 O
ATOM 13 C1' G B1620 -61.125 -16.717 71.064 1.00 72.67 C
ATOM 14 N9 G B1620 -59.960 -17.052 71.910 1.00 72.33 N
ATOM 15 C8 G B1620 -58.954 -17.951 71.636 1.00 72.44 C
ATOM 16 N7 G B1620 -58.025 -18.011 72.556 1.00 72.06 N
ATOM 17 C5 G B1620 -58.429 -17.075 73.491 1.00 71.64 C
ATOM 18 C6 G B1620 -57.840 -16.691 74.711 1.00 71.15 C
ATOM 19 O6 G B1620 -56.817 -17.101 75.227 1.00 70.96 O
ATOM 20 N1 G B1620 -58.571 -15.717 75.354 1.00 70.88 N
ATOM 21 C2 G B1620 -59.726 -15.181 74.856 1.00 71.06 C
ATOM 22 N2 G B1620 -60.324 -14.232 75.590 1.00 70.76 N
ATOM 23 N3 G B1620 -60.296 -15.536 73.726 1.00 71.53 N
ATOM 24 C4 G B1620 -59.607 -16.487 73.105 1.00 71.80 C
ATOM 25 P C B1621 -59.092 -13.671 67.870 1.00 75.51 P
ATOM 26 OP1 C B1621 -59.494 -12.765 66.768 1.00 75.34 O
ATOM 27 OP2 C B1621 -57.963 -14.609 67.641 1.00 75.57 O
ATOM 28 O5' C B1621 -58.829 -12.825 69.205 1.00 74.85 O
TER

Atoms:
C2: (-60.051,-19.133,75.157)
OP1: (-66.105,-21.230,70.481)
OP2: (-65.770,-20.105,72.728)
C4: (-61.662,-17.740,76.150)
O5': (-63.835,-21.212,71.568)
C3': (-61.362,-22.533,72.090)
C1': (-60.673,-20.631,73.298)
O4': (-61.059,-20.170,72.025)
C5': (-62.807,-21.036,70.607)
P: (-65.237,-20.475,71.406)
O2: (-58.902,-19.588,75.032)
C4': (-61.450,-21.301,71.197)
C2': (-61.429,-21.927,73.492)
O2': (-60.860,-22.713,74.511)
N1: (-61.007,-19.608,74.282)
N3: (-60.402,-18.197,76.083)
N4: (-62.033,-16.822,77.047)
C6: (-62.284,-19.156,74.365)
C5: (-62.655,-18.223,75.260)
O3': (-60.098,-23.172,71.896)
OP1: (-57.190,-18.124,66.862)
OP2: (-56.843,-19.754,68.842)
C3': (-60.251,-15.596,69.199)
C1': (-61.125,-16.717,71.064)
C5': (-60.018,-17.757,67.833)
O6: (-56.817,-17.101,75.227)
O4': (-61.150,-17.613,69.982)
C8: (-58.954,-17.951,71.636)
C2: (-59.726,-15.181,74.856)
C6: (-57.840,-16.691,74.711)
C5: (-58.429,-17.075,73.491)
C4: (-59.607,-16.487,73.105)
P: (-57.760,-19.128,67.832)
C4': (-60.868,-16.901,68.743)
C2': (-61.005,-15.313,70.476)
O2': (-62.299,-14.831,70.174)
N1: (-58.571,-15.717,75.354)
N2: (-60.324,-14.232,75.590)
N3: (-60.296,-15.536,73.726)
N7: (-58.025,-18.011,72.556)
N9: (-59.960,-17.052,71.910)
O5': (-59.047,-18.504,68.562)
O3': (-60.374,-14.566,68.246)
Image (generated by PyMOL):
PyMOL image
show in jmol