Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ6:01086:01018
Extra
PDB:
ATOM 1 O3' C A1085 45.302 99.108 111.681 1.00 59.59 O
ATOM 2 P C A1086 46.757 99.096 110.984 1.00 59.12 P
ATOM 3 OP1 C A1086 46.636 99.833 109.698 1.00 60.50 O
ATOM 4 OP2 C A1086 47.295 97.705 110.985 1.00 58.99 O
ATOM 5 O5' C A1086 47.637 99.988 111.963 1.00 57.94 O
ATOM 6 C5' C A1086 48.969 99.615 112.324 1.00 53.25 C
ATOM 7 C4' C A1086 49.742 100.843 112.694 1.00 52.01 C
ATOM 8 O4' C A1086 49.922 101.644 111.506 1.00 50.88 O
ATOM 9 C3' C A1086 49.043 101.763 113.682 1.00 51.71 C
ATOM 10 O3' C A1086 49.325 101.376 115.027 1.00 54.83 O
ATOM 11 C2' C A1086 49.662 103.117 113.366 1.00 51.34 C
ATOM 12 O2' C A1086 50.908 103.302 114.007 1.00 51.19 O
ATOM 13 C1' C A1086 49.859 103.020 111.846 1.00 51.09 C
ATOM 14 N1 C A1086 48.800 103.652 111.028 1.00 49.83 N
ATOM 15 C2 C A1086 48.574 105.038 111.139 1.00 48.75 C
ATOM 16 O2 C A1086 49.274 105.708 111.916 1.00 48.83 O
ATOM 17 N3 C A1086 47.603 105.607 110.393 1.00 47.10 N
ATOM 18 C4 C A1086 46.883 104.862 109.554 1.00 46.55 C
ATOM 19 N4 C A1086 45.945 105.469 108.831 1.00 47.08 N
ATOM 20 C5 C A1086 47.093 103.461 109.418 1.00 47.40 C
ATOM 21 C6 C A1086 48.046 102.902 110.168 1.00 47.55 C
ATOM 22 P U A1087 48.124 101.078 116.056 1.00 54.06 P
ATOM 23 OP1 U A1087 48.686 101.094 117.430 1.00 55.16 O
ATOM 24 OP2 U A1087 47.404 99.869 115.575 1.00 54.09 O
ATOM 25 O5' U A1087 47.175 102.340 115.906 1.00 54.41 O
TER
ATOM 1 O3' A B1017 54.283 98.718 109.938 1.00 49.36 O
ATOM 2 P G B1018 53.012 97.860 110.412 1.00 50.56 P
ATOM 3 OP1 G B1018 52.573 98.421 111.723 1.00 47.63 O
ATOM 4 OP2 G B1018 53.340 96.408 110.295 1.00 49.66 O
ATOM 5 O5' G B1018 51.904 98.190 109.318 1.00 50.10 O
ATOM 6 C5' G B1018 51.365 99.508 109.205 1.00 48.50 C
ATOM 7 C4' G B1018 51.520 100.009 107.793 1.00 47.58 C
ATOM 8 O4' G B1018 50.928 101.333 107.720 1.00 48.09 O
ATOM 9 C3' G B1018 52.956 100.164 107.297 1.00 46.36 C
ATOM 10 O3' G B1018 52.949 100.014 105.881 1.00 45.67 O
ATOM 11 C2' G B1018 53.249 101.620 107.648 1.00 47.17 C
ATOM 12 O2' G B1018 54.283 102.177 106.871 1.00 48.18 O
ATOM 13 C1' G B1018 51.904 102.263 107.313 1.00 47.23 C
ATOM 14 N9 G B1018 51.577 103.556 107.907 1.00 45.56 N
ATOM 15 C8 G B1018 52.221 104.219 108.924 1.00 46.38 C
ATOM 16 N7 G B1018 51.677 105.373 109.208 1.00 45.25 N
ATOM 17 C5 G B1018 50.607 105.473 108.332 1.00 44.91 C
ATOM 18 C6 G B1018 49.640 106.502 108.166 1.00 44.50 C
ATOM 19 O6 G B1018 49.523 107.562 108.788 1.00 43.99 O
ATOM 20 N1 G B1018 48.739 106.197 107.153 1.00 45.56 N
ATOM 21 C2 G B1018 48.756 105.051 106.399 1.00 45.63 C
ATOM 22 N2 G B1018 47.808 104.950 105.462 1.00 47.67 N
ATOM 23 N3 G B1018 49.638 104.082 106.549 1.00 45.98 N
ATOM 24 C4 G B1018 50.531 104.358 107.524 1.00 45.92 C
ATOM 25 P C B1019 53.761 98.813 105.180 1.00 48.20 P
ATOM 26 OP1 C B1019 53.355 98.799 103.748 1.00 50.70 O
ATOM 27 OP2 C B1019 53.614 97.570 105.977 1.00 49.07 O
ATOM 28 O5' C B1019 55.272 99.319 105.191 1.00 48.23 O
TER
ATOM 2 P C A1086 46.757 99.096 110.984 1.00 59.12 P
ATOM 3 OP1 C A1086 46.636 99.833 109.698 1.00 60.50 O
ATOM 4 OP2 C A1086 47.295 97.705 110.985 1.00 58.99 O
ATOM 5 O5' C A1086 47.637 99.988 111.963 1.00 57.94 O
ATOM 6 C5' C A1086 48.969 99.615 112.324 1.00 53.25 C
ATOM 7 C4' C A1086 49.742 100.843 112.694 1.00 52.01 C
ATOM 8 O4' C A1086 49.922 101.644 111.506 1.00 50.88 O
ATOM 9 C3' C A1086 49.043 101.763 113.682 1.00 51.71 C
ATOM 10 O3' C A1086 49.325 101.376 115.027 1.00 54.83 O
ATOM 11 C2' C A1086 49.662 103.117 113.366 1.00 51.34 C
ATOM 12 O2' C A1086 50.908 103.302 114.007 1.00 51.19 O
ATOM 13 C1' C A1086 49.859 103.020 111.846 1.00 51.09 C
ATOM 14 N1 C A1086 48.800 103.652 111.028 1.00 49.83 N
ATOM 15 C2 C A1086 48.574 105.038 111.139 1.00 48.75 C
ATOM 16 O2 C A1086 49.274 105.708 111.916 1.00 48.83 O
ATOM 17 N3 C A1086 47.603 105.607 110.393 1.00 47.10 N
ATOM 18 C4 C A1086 46.883 104.862 109.554 1.00 46.55 C
ATOM 19 N4 C A1086 45.945 105.469 108.831 1.00 47.08 N
ATOM 20 C5 C A1086 47.093 103.461 109.418 1.00 47.40 C
ATOM 21 C6 C A1086 48.046 102.902 110.168 1.00 47.55 C
ATOM 22 P U A1087 48.124 101.078 116.056 1.00 54.06 P
ATOM 23 OP1 U A1087 48.686 101.094 117.430 1.00 55.16 O
ATOM 24 OP2 U A1087 47.404 99.869 115.575 1.00 54.09 O
ATOM 25 O5' U A1087 47.175 102.340 115.906 1.00 54.41 O
TER
ATOM 1 O3' A B1017 54.283 98.718 109.938 1.00 49.36 O
ATOM 2 P G B1018 53.012 97.860 110.412 1.00 50.56 P
ATOM 3 OP1 G B1018 52.573 98.421 111.723 1.00 47.63 O
ATOM 4 OP2 G B1018 53.340 96.408 110.295 1.00 49.66 O
ATOM 5 O5' G B1018 51.904 98.190 109.318 1.00 50.10 O
ATOM 6 C5' G B1018 51.365 99.508 109.205 1.00 48.50 C
ATOM 7 C4' G B1018 51.520 100.009 107.793 1.00 47.58 C
ATOM 8 O4' G B1018 50.928 101.333 107.720 1.00 48.09 O
ATOM 9 C3' G B1018 52.956 100.164 107.297 1.00 46.36 C
ATOM 10 O3' G B1018 52.949 100.014 105.881 1.00 45.67 O
ATOM 11 C2' G B1018 53.249 101.620 107.648 1.00 47.17 C
ATOM 12 O2' G B1018 54.283 102.177 106.871 1.00 48.18 O
ATOM 13 C1' G B1018 51.904 102.263 107.313 1.00 47.23 C
ATOM 14 N9 G B1018 51.577 103.556 107.907 1.00 45.56 N
ATOM 15 C8 G B1018 52.221 104.219 108.924 1.00 46.38 C
ATOM 16 N7 G B1018 51.677 105.373 109.208 1.00 45.25 N
ATOM 17 C5 G B1018 50.607 105.473 108.332 1.00 44.91 C
ATOM 18 C6 G B1018 49.640 106.502 108.166 1.00 44.50 C
ATOM 19 O6 G B1018 49.523 107.562 108.788 1.00 43.99 O
ATOM 20 N1 G B1018 48.739 106.197 107.153 1.00 45.56 N
ATOM 21 C2 G B1018 48.756 105.051 106.399 1.00 45.63 C
ATOM 22 N2 G B1018 47.808 104.950 105.462 1.00 47.67 N
ATOM 23 N3 G B1018 49.638 104.082 106.549 1.00 45.98 N
ATOM 24 C4 G B1018 50.531 104.358 107.524 1.00 45.92 C
ATOM 25 P C B1019 53.761 98.813 105.180 1.00 48.20 P
ATOM 26 OP1 C B1019 53.355 98.799 103.748 1.00 50.70 O
ATOM 27 OP2 C B1019 53.614 97.570 105.977 1.00 49.07 O
ATOM 28 O5' C B1019 55.272 99.319 105.191 1.00 48.23 O
TER
Atoms:
C2: (48.574,105.038,111.139)
OP1: (46.636,99.833,109.698)
OP2: (47.295,97.705,110.985)
C4: (46.883,104.862,109.554)
O5': (47.637,99.988,111.963)
C3': (49.043,101.763,113.682)
C1': (49.859,103.020,111.846)
O4': (49.922,101.644,111.506)
C5': (48.969,99.615,112.324)
P: (46.757,99.096,110.984)
O2: (49.274,105.708,111.916)
C4': (49.742,100.843,112.694)
C2': (49.662,103.117,113.366)
O2': (50.908,103.302,114.007)
N1: (48.800,103.652,111.028)
N3: (47.603,105.607,110.393)
N4: (45.945,105.469,108.831)
C6: (48.046,102.902,110.168)
C5: (47.093,103.461,109.418)
O3': (49.325,101.376,115.027)
OP1: (46.636,99.833,109.698)
OP2: (47.295,97.705,110.985)
C4: (46.883,104.862,109.554)
O5': (47.637,99.988,111.963)
C3': (49.043,101.763,113.682)
C1': (49.859,103.020,111.846)
O4': (49.922,101.644,111.506)
C5': (48.969,99.615,112.324)
P: (46.757,99.096,110.984)
O2: (49.274,105.708,111.916)
C4': (49.742,100.843,112.694)
C2': (49.662,103.117,113.366)
O2': (50.908,103.302,114.007)
N1: (48.800,103.652,111.028)
N3: (47.603,105.607,110.393)
N4: (45.945,105.469,108.831)
C6: (48.046,102.902,110.168)
C5: (47.093,103.461,109.418)
O3': (49.325,101.376,115.027)
OP1: (52.573,98.421,111.723)
OP2: (53.340,96.408,110.295)
C3': (52.956,100.164,107.297)
C1': (51.904,102.263,107.313)
C5': (51.365,99.508,109.205)
O6: (49.523,107.562,108.788)
O4': (50.928,101.333,107.720)
C8: (52.221,104.219,108.924)
C2: (48.756,105.051,106.399)
C6: (49.640,106.502,108.166)
C5: (50.607,105.473,108.332)
C4: (50.531,104.358,107.524)
P: (53.012,97.860,110.412)
C4': (51.520,100.009,107.793)
C2': (53.249,101.620,107.648)
O2': (54.283,102.177,106.871)
N1: (48.739,106.197,107.153)
N2: (47.808,104.950,105.462)
N3: (49.638,104.082,106.549)
N7: (51.677,105.373,109.208)
N9: (51.577,103.556,107.907)
O5': (51.904,98.190,109.318)
O3': (52.949,100.014,105.881)
OP2: (53.340,96.408,110.295)
C3': (52.956,100.164,107.297)
C1': (51.904,102.263,107.313)
C5': (51.365,99.508,109.205)
O6: (49.523,107.562,108.788)
O4': (50.928,101.333,107.720)
C8: (52.221,104.219,108.924)
C2: (48.756,105.051,106.399)
C6: (49.640,106.502,108.166)
C5: (50.607,105.473,108.332)
C4: (50.531,104.358,107.524)
P: (53.012,97.860,110.412)
C4': (51.520,100.009,107.793)
C2': (53.249,101.620,107.648)
O2': (54.283,102.177,106.871)
N1: (48.739,106.197,107.153)
N2: (47.808,104.950,105.462)
N3: (49.638,104.082,106.549)
N7: (51.677,105.373,109.208)
N9: (51.577,103.556,107.907)
O5': (51.904,98.190,109.318)
O3': (52.949,100.014,105.881)
Image (generated by PyMOL):