Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:01086:01018
Extra
PDB:
ATOM 1 O3' C A1085 45.544 99.146 111.638 1.00 46.46 O
ATOM 2 P C A1086 47.012 99.082 110.985 1.00 45.80 P
ATOM 3 OP1 C A1086 46.982 99.888 109.743 1.00 47.31 O
ATOM 4 OP2 C A1086 47.438 97.662 110.918 1.00 46.09 O
ATOM 5 O5' C A1086 47.908 99.856 112.048 1.00 44.58 O
ATOM 6 C5' C A1086 49.316 99.608 112.173 1.00 42.65 C
ATOM 7 C4' C A1086 50.027 100.876 112.577 1.00 41.71 C
ATOM 8 O4' C A1086 50.197 101.726 111.420 1.00 39.68 O
ATOM 9 C3' C A1086 49.306 101.744 113.603 1.00 41.49 C
ATOM 10 O3' C A1086 49.583 101.317 114.942 1.00 42.66 O
ATOM 11 C2' C A1086 49.905 103.121 113.340 1.00 40.73 C
ATOM 12 O2' C A1086 51.146 103.305 113.990 1.00 42.08 O
ATOM 13 C1' C A1086 50.122 103.086 111.820 1.00 39.85 C
ATOM 14 N1 C A1086 49.070 103.759 111.027 1.00 38.75 N
ATOM 15 C2 C A1086 48.877 105.140 111.183 1.00 38.55 C
ATOM 16 O2 C A1086 49.611 105.773 111.960 1.00 38.58 O
ATOM 17 N3 C A1086 47.903 105.751 110.474 1.00 38.93 N
ATOM 18 C4 C A1086 47.151 105.048 109.625 1.00 38.56 C
ATOM 19 N4 C A1086 46.203 105.698 108.941 1.00 39.42 N
ATOM 20 C5 C A1086 47.337 103.649 109.436 1.00 37.70 C
ATOM 21 C6 C A1086 48.292 103.051 110.152 1.00 37.86 C
ATOM 22 P U A1087 48.380 100.950 115.947 1.00 42.61 P
ATOM 23 OP1 U A1087 48.963 100.881 117.312 1.00 40.03 O
ATOM 24 OP2 U A1087 47.650 99.777 115.397 1.00 41.51 O
ATOM 25 O5' U A1087 47.415 102.209 115.889 1.00 41.19 O
TER
ATOM 1 O3' A B1017 54.435 98.793 110.085 1.00 39.58 O
ATOM 2 P G B1018 53.179 97.892 110.523 1.00 39.80 P
ATOM 3 OP1 G B1018 52.680 98.413 111.829 1.00 37.29 O
ATOM 4 OP2 G B1018 53.572 96.467 110.402 1.00 40.32 O
ATOM 5 O5' G B1018 52.094 98.184 109.397 1.00 38.91 O
ATOM 6 C5' G B1018 51.561 99.504 109.221 1.00 38.39 C
ATOM 7 C4' G B1018 51.711 99.935 107.784 1.00 36.75 C
ATOM 8 O4' G B1018 51.166 101.276 107.632 1.00 35.03 O
ATOM 9 C3' G B1018 53.147 100.018 107.287 1.00 35.33 C
ATOM 10 O3' G B1018 53.125 99.807 105.878 1.00 36.28 O
ATOM 11 C2' G B1018 53.502 101.464 107.602 1.00 34.01 C
ATOM 12 O2' G B1018 54.583 101.952 106.843 1.00 33.55 O
ATOM 13 C1' G B1018 52.192 102.160 107.230 1.00 34.01 C
ATOM 14 N9 G B1018 51.930 103.456 107.849 1.00 32.81 N
ATOM 15 C8 G B1018 52.636 104.075 108.853 1.00 32.89 C
ATOM 16 N7 G B1018 52.125 105.223 109.205 1.00 32.47 N
ATOM 17 C5 G B1018 51.021 105.376 108.379 1.00 31.49 C
ATOM 18 C6 G B1018 50.071 106.426 108.301 1.00 31.69 C
ATOM 19 O6 G B1018 50.009 107.465 108.976 1.00 30.34 O
ATOM 20 N1 G B1018 49.114 106.177 107.319 1.00 32.94 N
ATOM 21 C2 G B1018 49.070 105.058 106.520 1.00 33.96 C
ATOM 22 N2 G B1018 48.059 104.996 105.637 1.00 34.01 N
ATOM 23 N3 G B1018 49.951 104.073 106.585 1.00 33.64 N
ATOM 24 C4 G B1018 50.891 104.297 107.531 1.00 32.57 C
ATOM 25 P C B1019 53.996 98.626 105.223 1.00 39.00 P
ATOM 26 OP1 C B1019 53.573 98.479 103.804 1.00 41.01 O
ATOM 27 OP2 C B1019 53.946 97.443 106.119 1.00 40.26 O
ATOM 28 O5' C B1019 55.473 99.216 105.200 1.00 37.00 O
TER
ATOM 2 P C A1086 47.012 99.082 110.985 1.00 45.80 P
ATOM 3 OP1 C A1086 46.982 99.888 109.743 1.00 47.31 O
ATOM 4 OP2 C A1086 47.438 97.662 110.918 1.00 46.09 O
ATOM 5 O5' C A1086 47.908 99.856 112.048 1.00 44.58 O
ATOM 6 C5' C A1086 49.316 99.608 112.173 1.00 42.65 C
ATOM 7 C4' C A1086 50.027 100.876 112.577 1.00 41.71 C
ATOM 8 O4' C A1086 50.197 101.726 111.420 1.00 39.68 O
ATOM 9 C3' C A1086 49.306 101.744 113.603 1.00 41.49 C
ATOM 10 O3' C A1086 49.583 101.317 114.942 1.00 42.66 O
ATOM 11 C2' C A1086 49.905 103.121 113.340 1.00 40.73 C
ATOM 12 O2' C A1086 51.146 103.305 113.990 1.00 42.08 O
ATOM 13 C1' C A1086 50.122 103.086 111.820 1.00 39.85 C
ATOM 14 N1 C A1086 49.070 103.759 111.027 1.00 38.75 N
ATOM 15 C2 C A1086 48.877 105.140 111.183 1.00 38.55 C
ATOM 16 O2 C A1086 49.611 105.773 111.960 1.00 38.58 O
ATOM 17 N3 C A1086 47.903 105.751 110.474 1.00 38.93 N
ATOM 18 C4 C A1086 47.151 105.048 109.625 1.00 38.56 C
ATOM 19 N4 C A1086 46.203 105.698 108.941 1.00 39.42 N
ATOM 20 C5 C A1086 47.337 103.649 109.436 1.00 37.70 C
ATOM 21 C6 C A1086 48.292 103.051 110.152 1.00 37.86 C
ATOM 22 P U A1087 48.380 100.950 115.947 1.00 42.61 P
ATOM 23 OP1 U A1087 48.963 100.881 117.312 1.00 40.03 O
ATOM 24 OP2 U A1087 47.650 99.777 115.397 1.00 41.51 O
ATOM 25 O5' U A1087 47.415 102.209 115.889 1.00 41.19 O
TER
ATOM 1 O3' A B1017 54.435 98.793 110.085 1.00 39.58 O
ATOM 2 P G B1018 53.179 97.892 110.523 1.00 39.80 P
ATOM 3 OP1 G B1018 52.680 98.413 111.829 1.00 37.29 O
ATOM 4 OP2 G B1018 53.572 96.467 110.402 1.00 40.32 O
ATOM 5 O5' G B1018 52.094 98.184 109.397 1.00 38.91 O
ATOM 6 C5' G B1018 51.561 99.504 109.221 1.00 38.39 C
ATOM 7 C4' G B1018 51.711 99.935 107.784 1.00 36.75 C
ATOM 8 O4' G B1018 51.166 101.276 107.632 1.00 35.03 O
ATOM 9 C3' G B1018 53.147 100.018 107.287 1.00 35.33 C
ATOM 10 O3' G B1018 53.125 99.807 105.878 1.00 36.28 O
ATOM 11 C2' G B1018 53.502 101.464 107.602 1.00 34.01 C
ATOM 12 O2' G B1018 54.583 101.952 106.843 1.00 33.55 O
ATOM 13 C1' G B1018 52.192 102.160 107.230 1.00 34.01 C
ATOM 14 N9 G B1018 51.930 103.456 107.849 1.00 32.81 N
ATOM 15 C8 G B1018 52.636 104.075 108.853 1.00 32.89 C
ATOM 16 N7 G B1018 52.125 105.223 109.205 1.00 32.47 N
ATOM 17 C5 G B1018 51.021 105.376 108.379 1.00 31.49 C
ATOM 18 C6 G B1018 50.071 106.426 108.301 1.00 31.69 C
ATOM 19 O6 G B1018 50.009 107.465 108.976 1.00 30.34 O
ATOM 20 N1 G B1018 49.114 106.177 107.319 1.00 32.94 N
ATOM 21 C2 G B1018 49.070 105.058 106.520 1.00 33.96 C
ATOM 22 N2 G B1018 48.059 104.996 105.637 1.00 34.01 N
ATOM 23 N3 G B1018 49.951 104.073 106.585 1.00 33.64 N
ATOM 24 C4 G B1018 50.891 104.297 107.531 1.00 32.57 C
ATOM 25 P C B1019 53.996 98.626 105.223 1.00 39.00 P
ATOM 26 OP1 C B1019 53.573 98.479 103.804 1.00 41.01 O
ATOM 27 OP2 C B1019 53.946 97.443 106.119 1.00 40.26 O
ATOM 28 O5' C B1019 55.473 99.216 105.200 1.00 37.00 O
TER
Atoms:
C2: (48.877,105.140,111.183)
OP1: (46.982,99.888,109.743)
OP2: (47.438,97.662,110.918)
C4: (47.151,105.048,109.625)
O5': (47.908,99.856,112.048)
C3': (49.306,101.744,113.603)
C1': (50.122,103.086,111.820)
O4': (50.197,101.726,111.420)
C5': (49.316,99.608,112.173)
P: (47.012,99.082,110.985)
O2: (49.611,105.773,111.960)
C4': (50.027,100.876,112.577)
C2': (49.905,103.121,113.340)
O2': (51.146,103.305,113.990)
N1: (49.070,103.759,111.027)
N3: (47.903,105.751,110.474)
N4: (46.203,105.698,108.941)
C6: (48.292,103.051,110.152)
C5: (47.337,103.649,109.436)
O3': (49.583,101.317,114.942)
OP1: (46.982,99.888,109.743)
OP2: (47.438,97.662,110.918)
C4: (47.151,105.048,109.625)
O5': (47.908,99.856,112.048)
C3': (49.306,101.744,113.603)
C1': (50.122,103.086,111.820)
O4': (50.197,101.726,111.420)
C5': (49.316,99.608,112.173)
P: (47.012,99.082,110.985)
O2: (49.611,105.773,111.960)
C4': (50.027,100.876,112.577)
C2': (49.905,103.121,113.340)
O2': (51.146,103.305,113.990)
N1: (49.070,103.759,111.027)
N3: (47.903,105.751,110.474)
N4: (46.203,105.698,108.941)
C6: (48.292,103.051,110.152)
C5: (47.337,103.649,109.436)
O3': (49.583,101.317,114.942)
OP1: (52.680,98.413,111.829)
OP2: (53.572,96.467,110.402)
C3': (53.147,100.018,107.287)
C1': (52.192,102.160,107.230)
C5': (51.561,99.504,109.221)
O6: (50.009,107.465,108.976)
O4': (51.166,101.276,107.632)
C8: (52.636,104.075,108.853)
C2: (49.070,105.058,106.520)
C6: (50.071,106.426,108.301)
C5: (51.021,105.376,108.379)
C4: (50.891,104.297,107.531)
P: (53.179,97.892,110.523)
C4': (51.711,99.935,107.784)
C2': (53.502,101.464,107.602)
O2': (54.583,101.952,106.843)
N1: (49.114,106.177,107.319)
N2: (48.059,104.996,105.637)
N3: (49.951,104.073,106.585)
N7: (52.125,105.223,109.205)
N9: (51.930,103.456,107.849)
O5': (52.094,98.184,109.397)
O3': (53.125,99.807,105.878)
OP2: (53.572,96.467,110.402)
C3': (53.147,100.018,107.287)
C1': (52.192,102.160,107.230)
C5': (51.561,99.504,109.221)
O6: (50.009,107.465,108.976)
O4': (51.166,101.276,107.632)
C8: (52.636,104.075,108.853)
C2: (49.070,105.058,106.520)
C6: (50.071,106.426,108.301)
C5: (51.021,105.376,108.379)
C4: (50.891,104.297,107.531)
P: (53.179,97.892,110.523)
C4': (51.711,99.935,107.784)
C2': (53.502,101.464,107.602)
O2': (54.583,101.952,106.843)
N1: (49.114,106.177,107.319)
N2: (48.059,104.996,105.637)
N3: (49.951,104.073,106.585)
N7: (52.125,105.223,109.205)
N9: (51.930,103.456,107.849)
O5': (52.094,98.184,109.397)
O3': (53.125,99.807,105.878)
Image (generated by PyMOL):