ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:01957:01848

Extra

PDB:
ATOM 1 O3' A A1956 113.989 119.229 92.015 1.00 49.16 O
ATOM 2 P A A1957 114.561 118.775 90.587 1.00 50.33 P
ATOM 3 OP1 A A1957 113.756 117.605 90.182 1.00 51.34 O
ATOM 4 OP2 A A1957 116.033 118.656 90.668 1.00 51.70 O
ATOM 5 O5' A A1957 114.209 119.974 89.593 1.00 50.15 O
ATOM 6 C5' A A1957 112.844 120.217 89.197 1.00 52.41 C
ATOM 7 C4' A A1957 112.715 121.522 88.434 1.00 51.12 C
ATOM 8 O4' A A1957 113.652 122.501 88.898 1.00 51.61 O
ATOM 9 C3' A A1957 112.850 121.519 86.913 1.00 49.36 C
ATOM 10 O3' A A1957 111.566 121.666 86.303 1.00 47.68 O
ATOM 11 C2' A A1957 113.737 122.737 86.617 1.00 50.71 C
ATOM 12 O2' A A1957 113.209 123.537 85.576 1.00 51.54 O
ATOM 13 C1' A A1957 113.712 123.511 87.933 1.00 51.61 C
ATOM 14 N9 A A1957 114.919 124.296 88.193 1.00 52.75 N
ATOM 15 C8 A A1957 116.067 123.883 88.822 1.00 53.80 C
ATOM 16 N7 A A1957 116.968 124.822 88.951 1.00 54.63 N
ATOM 17 C5 A A1957 116.379 125.928 88.358 1.00 55.50 C
ATOM 18 C6 A A1957 116.820 127.251 88.175 1.00 56.47 C
ATOM 19 N6 A A1957 118.008 127.704 88.578 1.00 55.72 N
ATOM 20 N1 A A1957 115.987 128.106 87.547 1.00 57.65 N
ATOM 21 C2 A A1957 114.802 127.649 87.125 1.00 56.44 C
ATOM 22 N3 A A1957 114.280 126.433 87.234 1.00 54.46 N
ATOM 23 C4 A A1957 115.124 125.612 87.872 1.00 53.91 C
ATOM 24 P U A1958 110.575 120.397 86.189 1.00 45.42 P
ATOM 25 OP1 U A1958 111.317 119.174 85.824 1.00 44.12 O
ATOM 26 OP2 U A1958 109.414 120.790 85.378 1.00 46.88 O
ATOM 27 O5' U A1958 110.044 120.271 87.683 1.00 46.32 O
TER

ATOM 1 O3' C B1847 124.138 122.318 95.790 1.00 53.13 O
ATOM 2 P U B1848 124.453 121.465 94.479 1.00 54.08 P
ATOM 3 OP1 U B1848 125.316 120.332 94.865 1.00 55.52 O
ATOM 4 OP2 U B1848 124.885 122.392 93.400 1.00 52.93 O
ATOM 5 O5' U B1848 123.035 120.884 94.066 1.00 55.50 O
ATOM 6 C5' U B1848 122.224 120.169 95.009 1.00 54.75 C
ATOM 7 C4' U B1848 120.847 119.963 94.436 1.00 53.79 C
ATOM 8 O4' U B1848 120.202 121.249 94.266 1.00 51.43 O
ATOM 9 C3' U B1848 120.823 119.336 93.051 1.00 53.27 C
ATOM 10 O3' U B1848 120.883 117.917 93.151 1.00 53.94 O
ATOM 11 C2' U B1848 119.488 119.817 92.502 1.00 53.63 C
ATOM 12 O2' U B1848 118.394 119.064 92.992 1.00 55.52 O
ATOM 13 C1' U B1848 119.409 121.226 93.094 1.00 52.26 C
ATOM 14 N1 U B1848 119.862 122.295 92.191 1.00 50.34 N
ATOM 15 C2 U B1848 118.991 122.705 91.206 1.00 50.67 C
ATOM 16 O2 U B1848 117.899 122.202 91.040 1.00 51.70 O
ATOM 17 N3 U B1848 119.445 123.728 90.417 1.00 50.61 N
ATOM 18 C4 U B1848 120.654 124.365 90.506 1.00 50.06 C
ATOM 19 O4 U B1848 120.912 125.290 89.731 1.00 49.65 O
ATOM 20 C5 U B1848 121.505 123.874 91.539 1.00 50.43 C
ATOM 21 C6 U B1848 121.091 122.879 92.324 1.00 50.32 C
ATOM 22 P G B1849 121.569 117.057 91.984 1.00 54.42 P
ATOM 23 OP1 G B1849 122.764 117.825 91.558 1.00 55.65 O
ATOM 24 OP2 G B1849 120.561 116.659 90.972 1.00 55.24 O
ATOM 25 O5' G B1849 122.026 115.726 92.727 1.00 54.78 O
TER

Atoms:
OP1: (113.756,117.605,90.182)
OP2: (116.033,118.656,90.668)
C3': (112.850,121.519,86.913)
C1': (113.712,123.511,87.933)
C5': (112.844,120.217,89.197)
O4': (113.652,122.501,88.898)
C8: (116.067,123.883,88.822)
O2': (113.209,123.537,85.576)
C6: (116.820,127.251,88.175)
C5: (116.379,125.928,88.358)
C4: (115.124,125.612,87.872)
P: (114.561,118.775,90.587)
C4': (112.715,121.522,88.434)
C2': (113.737,122.737,86.617)
C2: (114.802,127.649,87.125)
N1: (115.987,128.106,87.547)
N3: (114.280,126.433,87.234)
N6: (118.008,127.704,88.578)
N7: (116.968,124.822,88.951)
N9: (114.919,124.296,88.193)
O5': (114.209,119.974,89.593)
O3': (111.566,121.666,86.303)
C4: (120.654,124.365,90.506)
N3: (119.445,123.728,90.417)
OP1: (125.316,120.332,94.865)
OP2: (124.885,122.392,93.400)
C2: (118.991,122.705,91.206)
C1': (119.409,121.226,93.094)
C3': (120.823,119.336,93.051)
O5': (123.035,120.884,94.066)
O4': (120.202,121.249,94.266)
C5': (122.224,120.169,95.009)
P: (124.453,121.465,94.479)
C4': (120.847,119.963,94.436)
C2': (119.488,119.817,92.502)
O2': (118.394,119.064,92.992)
N1: (119.862,122.295,92.191)
O4: (120.912,125.290,89.731)
O2: (117.899,122.202,91.040)
C6: (121.091,122.879,92.324)
C5: (121.505,123.874,91.539)
O3': (120.883,117.917,93.151)
Image (generated by PyMOL):
PyMOL image
show in jmol