Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DVI:B14:B15
Extra
PDB:
ATOM 1 O3' U A 13 -21.239 4.491 -7.585 1.00 52.40 O
ATOM 2 P C A 14 -22.608 5.289 -7.323 1.00 50.53 P
ATOM 3 OP1 C A 14 -23.366 4.597 -6.249 1.00 52.01 O
ATOM 4 OP2 C A 14 -23.238 5.487 -8.647 1.00 53.17 O
ATOM 5 O5' C A 14 -22.120 6.714 -6.810 1.00 49.36 O
ATOM 6 C5' C A 14 -23.004 7.833 -6.771 1.00 46.47 C
ATOM 7 C4' C A 14 -22.220 9.115 -6.558 1.00 47.06 C
ATOM 8 O4' C A 14 -21.619 9.151 -5.229 1.00 45.99 O
ATOM 9 C3' C A 14 -21.037 9.315 -7.491 1.00 46.30 C
ATOM 10 O3' C A 14 -21.470 9.847 -8.736 1.00 48.23 O
ATOM 11 C2' C A 14 -20.196 10.334 -6.732 1.00 45.43 C
ATOM 12 O2' C A 14 -20.704 11.645 -6.875 1.00 44.35 O
ATOM 13 C1' C A 14 -20.419 9.902 -5.286 1.00 44.17 C
ATOM 14 N1 C A 14 -19.333 9.147 -4.634 1.00 43.43 N
ATOM 15 C2 C A 14 -19.310 7.753 -4.756 1.00 43.77 C
ATOM 16 O2 C A 14 -20.205 7.198 -5.396 1.00 47.02 O
ATOM 17 N3 C A 14 -18.317 7.049 -4.169 1.00 41.29 N
ATOM 18 C4 C A 14 -17.364 7.686 -3.490 1.00 40.50 C
ATOM 19 N4 C A 14 -16.410 6.945 -2.926 1.00 40.52 N
ATOM 20 C5 C A 14 -17.352 9.110 -3.358 1.00 38.99 C
ATOM 21 C6 C A 14 -18.350 9.794 -3.936 1.00 38.86 C
ATOM 22 P G A 15 -20.669 9.484 -10.081 1.00 48.20 P
ATOM 23 OP1 G A 15 -21.205 10.346 -11.167 1.00 50.12 O
ATOM 24 OP2 G A 15 -20.696 8.007 -10.234 1.00 48.15 O
ATOM 25 O5' G A 15 -19.171 9.941 -9.779 1.00 48.64 O
TER
ATOM 1 O3' C B 14 -21.470 9.847 -8.736 1.00 48.23 O
ATOM 2 P G B 15 -20.669 9.484 -10.081 1.00 48.20 P
ATOM 3 OP1 G B 15 -21.205 10.346 -11.167 1.00 50.12 O
ATOM 4 OP2 G B 15 -20.696 8.007 -10.234 1.00 48.15 O
ATOM 5 O5' G B 15 -19.171 9.941 -9.779 1.00 48.64 O
ATOM 6 C5' G B 15 -18.839 11.322 -9.701 1.00 50.02 C
ATOM 7 C4' G B 15 -17.401 11.491 -9.284 1.00 52.88 C
ATOM 8 O4' G B 15 -17.211 10.972 -7.945 1.00 53.10 O
ATOM 9 C3' G B 15 -16.397 10.735 -10.131 1.00 54.54 C
ATOM 10 O3' G B 15 -16.073 11.515 -11.275 1.00 59.43 O
ATOM 11 C2' G B 15 -15.214 10.585 -9.181 1.00 54.11 C
ATOM 12 O2' G B 15 -14.368 11.713 -9.132 1.00 54.25 O
ATOM 13 C1' G B 15 -15.917 10.406 -7.833 1.00 53.02 C
ATOM 14 N9 G B 15 -16.068 9.004 -7.458 1.00 51.85 N
ATOM 15 C8 G B 15 -17.065 8.144 -7.853 1.00 50.76 C
ATOM 16 N7 G B 15 -16.922 6.941 -7.367 1.00 50.34 N
ATOM 17 C5 G B 15 -15.764 7.014 -6.604 1.00 50.40 C
ATOM 18 C6 G B 15 -15.102 6.017 -5.840 1.00 50.01 C
ATOM 19 O6 G B 15 -15.418 4.835 -5.681 1.00 52.72 O
ATOM 20 N1 G B 15 -13.958 6.518 -5.225 1.00 49.19 N
ATOM 21 C2 G B 15 -13.509 7.813 -5.329 1.00 50.77 C
ATOM 22 N2 G B 15 -12.383 8.110 -4.663 1.00 48.06 N
ATOM 23 N3 G B 15 -14.121 8.750 -6.038 1.00 51.85 N
ATOM 24 C4 G B 15 -15.231 8.283 -6.645 1.00 50.12 C
ATOM 25 P A B 16 -15.892 10.806 -12.703 1.00 62.49 P
ATOM 26 OP1 A B 16 -15.623 11.878 -13.697 1.00 60.99 O
ATOM 27 OP2 A B 16 -17.027 9.865 -12.920 1.00 60.58 O
ATOM 28 O5' A B 16 -14.554 9.969 -12.521 1.00 63.35 O
TER
ATOM 2 P C A 14 -22.608 5.289 -7.323 1.00 50.53 P
ATOM 3 OP1 C A 14 -23.366 4.597 -6.249 1.00 52.01 O
ATOM 4 OP2 C A 14 -23.238 5.487 -8.647 1.00 53.17 O
ATOM 5 O5' C A 14 -22.120 6.714 -6.810 1.00 49.36 O
ATOM 6 C5' C A 14 -23.004 7.833 -6.771 1.00 46.47 C
ATOM 7 C4' C A 14 -22.220 9.115 -6.558 1.00 47.06 C
ATOM 8 O4' C A 14 -21.619 9.151 -5.229 1.00 45.99 O
ATOM 9 C3' C A 14 -21.037 9.315 -7.491 1.00 46.30 C
ATOM 10 O3' C A 14 -21.470 9.847 -8.736 1.00 48.23 O
ATOM 11 C2' C A 14 -20.196 10.334 -6.732 1.00 45.43 C
ATOM 12 O2' C A 14 -20.704 11.645 -6.875 1.00 44.35 O
ATOM 13 C1' C A 14 -20.419 9.902 -5.286 1.00 44.17 C
ATOM 14 N1 C A 14 -19.333 9.147 -4.634 1.00 43.43 N
ATOM 15 C2 C A 14 -19.310 7.753 -4.756 1.00 43.77 C
ATOM 16 O2 C A 14 -20.205 7.198 -5.396 1.00 47.02 O
ATOM 17 N3 C A 14 -18.317 7.049 -4.169 1.00 41.29 N
ATOM 18 C4 C A 14 -17.364 7.686 -3.490 1.00 40.50 C
ATOM 19 N4 C A 14 -16.410 6.945 -2.926 1.00 40.52 N
ATOM 20 C5 C A 14 -17.352 9.110 -3.358 1.00 38.99 C
ATOM 21 C6 C A 14 -18.350 9.794 -3.936 1.00 38.86 C
ATOM 22 P G A 15 -20.669 9.484 -10.081 1.00 48.20 P
ATOM 23 OP1 G A 15 -21.205 10.346 -11.167 1.00 50.12 O
ATOM 24 OP2 G A 15 -20.696 8.007 -10.234 1.00 48.15 O
ATOM 25 O5' G A 15 -19.171 9.941 -9.779 1.00 48.64 O
TER
ATOM 1 O3' C B 14 -21.470 9.847 -8.736 1.00 48.23 O
ATOM 2 P G B 15 -20.669 9.484 -10.081 1.00 48.20 P
ATOM 3 OP1 G B 15 -21.205 10.346 -11.167 1.00 50.12 O
ATOM 4 OP2 G B 15 -20.696 8.007 -10.234 1.00 48.15 O
ATOM 5 O5' G B 15 -19.171 9.941 -9.779 1.00 48.64 O
ATOM 6 C5' G B 15 -18.839 11.322 -9.701 1.00 50.02 C
ATOM 7 C4' G B 15 -17.401 11.491 -9.284 1.00 52.88 C
ATOM 8 O4' G B 15 -17.211 10.972 -7.945 1.00 53.10 O
ATOM 9 C3' G B 15 -16.397 10.735 -10.131 1.00 54.54 C
ATOM 10 O3' G B 15 -16.073 11.515 -11.275 1.00 59.43 O
ATOM 11 C2' G B 15 -15.214 10.585 -9.181 1.00 54.11 C
ATOM 12 O2' G B 15 -14.368 11.713 -9.132 1.00 54.25 O
ATOM 13 C1' G B 15 -15.917 10.406 -7.833 1.00 53.02 C
ATOM 14 N9 G B 15 -16.068 9.004 -7.458 1.00 51.85 N
ATOM 15 C8 G B 15 -17.065 8.144 -7.853 1.00 50.76 C
ATOM 16 N7 G B 15 -16.922 6.941 -7.367 1.00 50.34 N
ATOM 17 C5 G B 15 -15.764 7.014 -6.604 1.00 50.40 C
ATOM 18 C6 G B 15 -15.102 6.017 -5.840 1.00 50.01 C
ATOM 19 O6 G B 15 -15.418 4.835 -5.681 1.00 52.72 O
ATOM 20 N1 G B 15 -13.958 6.518 -5.225 1.00 49.19 N
ATOM 21 C2 G B 15 -13.509 7.813 -5.329 1.00 50.77 C
ATOM 22 N2 G B 15 -12.383 8.110 -4.663 1.00 48.06 N
ATOM 23 N3 G B 15 -14.121 8.750 -6.038 1.00 51.85 N
ATOM 24 C4 G B 15 -15.231 8.283 -6.645 1.00 50.12 C
ATOM 25 P A B 16 -15.892 10.806 -12.703 1.00 62.49 P
ATOM 26 OP1 A B 16 -15.623 11.878 -13.697 1.00 60.99 O
ATOM 27 OP2 A B 16 -17.027 9.865 -12.920 1.00 60.58 O
ATOM 28 O5' A B 16 -14.554 9.969 -12.521 1.00 63.35 O
TER
Atoms:
C2: (-19.310,7.753,-4.756)
OP1: (-23.366,4.597,-6.249)
OP2: (-23.238,5.487,-8.647)
C4: (-17.364,7.686,-3.490)
O5': (-22.120,6.714,-6.810)
C3': (-21.037,9.315,-7.491)
C1': (-20.419,9.902,-5.286)
O4': (-21.619,9.151,-5.229)
C5': (-23.004,7.833,-6.771)
P: (-22.608,5.289,-7.323)
O2: (-20.205,7.198,-5.396)
C4': (-22.220,9.115,-6.558)
C2': (-20.196,10.334,-6.732)
O2': (-20.704,11.645,-6.875)
N1: (-19.333,9.147,-4.634)
N3: (-18.317,7.049,-4.169)
N4: (-16.410,6.945,-2.926)
C6: (-18.350,9.794,-3.936)
C5: (-17.352,9.110,-3.358)
O3': (-21.470,9.847,-8.736)
OP1: (-23.366,4.597,-6.249)
OP2: (-23.238,5.487,-8.647)
C4: (-17.364,7.686,-3.490)
O5': (-22.120,6.714,-6.810)
C3': (-21.037,9.315,-7.491)
C1': (-20.419,9.902,-5.286)
O4': (-21.619,9.151,-5.229)
C5': (-23.004,7.833,-6.771)
P: (-22.608,5.289,-7.323)
O2: (-20.205,7.198,-5.396)
C4': (-22.220,9.115,-6.558)
C2': (-20.196,10.334,-6.732)
O2': (-20.704,11.645,-6.875)
N1: (-19.333,9.147,-4.634)
N3: (-18.317,7.049,-4.169)
N4: (-16.410,6.945,-2.926)
C6: (-18.350,9.794,-3.936)
C5: (-17.352,9.110,-3.358)
O3': (-21.470,9.847,-8.736)
OP1: (-21.205,10.346,-11.167)
OP2: (-20.696,8.007,-10.234)
C3': (-16.397,10.735,-10.131)
C1': (-15.917,10.406,-7.833)
C5': (-18.839,11.322,-9.701)
O6: (-15.418,4.835,-5.681)
O4': (-17.211,10.972,-7.945)
C8: (-17.065,8.144,-7.853)
C2: (-13.509,7.813,-5.329)
C6: (-15.102,6.017,-5.840)
C5: (-15.764,7.014,-6.604)
C4: (-15.231,8.283,-6.645)
P: (-20.669,9.484,-10.081)
C4': (-17.401,11.491,-9.284)
C2': (-15.214,10.585,-9.181)
O2': (-14.368,11.713,-9.132)
N1: (-13.958,6.518,-5.225)
N2: (-12.383,8.110,-4.663)
N3: (-14.121,8.750,-6.038)
N7: (-16.922,6.941,-7.367)
N9: (-16.068,9.004,-7.458)
O5': (-19.171,9.941,-9.779)
O3': (-16.073,11.515,-11.275)
OP2: (-20.696,8.007,-10.234)
C3': (-16.397,10.735,-10.131)
C1': (-15.917,10.406,-7.833)
C5': (-18.839,11.322,-9.701)
O6: (-15.418,4.835,-5.681)
O4': (-17.211,10.972,-7.945)
C8: (-17.065,8.144,-7.853)
C2: (-13.509,7.813,-5.329)
C6: (-15.102,6.017,-5.840)
C5: (-15.764,7.014,-6.604)
C4: (-15.231,8.283,-6.645)
P: (-20.669,9.484,-10.081)
C4': (-17.401,11.491,-9.284)
C2': (-15.214,10.585,-9.181)
O2': (-14.368,11.713,-9.132)
N1: (-13.958,6.518,-5.225)
N2: (-12.383,8.110,-4.663)
N3: (-14.121,8.750,-6.038)
N7: (-16.922,6.941,-7.367)
N9: (-16.068,9.004,-7.458)
O5': (-19.171,9.941,-9.779)
O3': (-16.073,11.515,-11.275)
Image (generated by PyMOL):