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RNA Secondary Structure Atlas - PDB - 2KGP_A
RNA: 2KGP_A
Rfam family:
-
| GGCAGUGUGAGUACCUUCACACGUC | |||
| Reference structure (std) | [ sec struct ] | (((.((((((......))))))))) | |
| Reference structure (ext) | [ sec struct ] | (((.((((((......))))))))) | |
| Afold | [ FASTA input ] | [ sec struct ] | (((.(((((((....)))))))))) |
| Alterna | [ FASTA input ] | [ sec struct ] | (((.(((((((....)))))))))) |
| Contrafold | [ FASTA input ] | [ sec struct ] | (((.(((((((....)))))))))) |
| HotKnots | [ FASTA input ] | [ sec struct ] | (((.(((((((....)))))))))) |
| MCFold | [ FASTA input ] | [ sec struct ] | (((.(((((((....)))))))))) |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | (((.(((((((....)))))))))) |
| McQFold | [ FASTA input ] | [ sec struct ] | ....(((((((....)))))))... |
| Pknots | [ FASTA input ] | [ sec struct ] | ....(((((((....)))))))... |
| PknotsRG | [ FASTA input ] | [ sec struct ] | .((.[[[[[[))....]]]]]]... |
| RDfolder | [ FASTA input ] | [ sec struct ] | (((.((((((......))))))))) |
| RNAfold | [ FASTA input ] | [ sec struct ] | (((.(((((((....)))))))))) |
| RNAshapes | [ FASTA input ] | [ sec struct ] | (((.(((((((....)))))))))) |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | (((.((((((......))))))))) |
| Sfold | [ FASTA input ] | [ sec struct ] | (((.(((((((....)))))))))) |
| UNAFold | [ FASTA input ] | [ sec struct ] | (((.(((((((....)))))))))) |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | .....((((..........)))).. |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | ....(((((((....)))))))... |