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RNA Secondary Structure Atlas - PDB - 2LC8_A
RNA: 2LC8_A
Rfam family:
GP_knot1
| GGUCAGGGUCAGGAGCCCCCCCCUGAACCCAGGAUAACCCUCAAAGUCGGGGGGCA | |||
| Reference structure (std) | [ sec struct ] | .(((.((((((((.[[[[[[[)))).))))..))).............]]]]]]]. | |
| Reference structure (ext) | [ sec struct ] |
.((((((((((((({{{{{.[)))).))))).))).............])}}}}}. ( ) |
|
| Afold | [ FASTA input ] | [ sec struct ] | ((((.((((((((........)))).))))..)))..(((((......)))))..) |
| Alterna | [ FASTA input ] | [ sec struct ] | .((..((((((((........)))).)))).......(((((......))))))). |
| CRWrnafold | [ FASTA input ] | [ sec struct ] | .....((((.....))))((((((((....(((.....))).....)))))))).. |
| Carnac(seed) | [ FASTA input ] | [ sec struct ] | .....((((.................)))).......................... |
| CentroidAlifold(seed) | [ FASTA input ] | [ sec struct ] | ........................................................ |
| CentroidFold (ext) | [ FASTA input ] | [ sec struct ] | ..............(((((((...(......((.....)).......)))))))). |
| CentroidFold | [ FASTA input ] | [ sec struct ] | ..............(((((((...(......((.....)).......)))))))). |
| CentroidHomfold‑LAST | [ FASTA input ] | [ sec struct ] | ..((((((............))))))...........(((((......)))))... |
| ContextFold | [ FASTA input ] | [ sec struct ] | .(((.((((((((........))))).)))..)))..(((((.......))))).. |
| Contrafold | [ FASTA input ] | [ sec struct ] | ..............(((((((...((....(((.....))).....))))))))). |
| Cylofold | [ FASTA input ] | [ sec struct ] | ....(((((((((.[[[[[[[)))))...........)))).......]]]]]]]. |
| Fold | [ FASTA input ] | [ sec struct ] | .....((((.....))))((((((((....(((.....))).....)))))))).. |
| HotKnots | [ FASTA input ] | [ sec struct ] | .(((.((((((((........)))).))))..)))..(((((......)))))... |
| IPknot | [ FASTA input ] | [ sec struct ] | .....(((..(((.....[[[))){{.)))................}}...]]].. |
| MCFold | [ FASTA input ] | [ sec struct ] | ..((.((((((((.(....).)))).)))).)).(..(((((.(..).)))))..) |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | .(((((((((((((((..))))))).))))))))((((((((((..)))))))))) |
| MXScarna(seed) | [ FASTA input ] | [ sec struct ] | ((...((((.....))))))......((((.......((.....)).....)))). |
| Mastr(seed) | [ FASTA input ] | [ sec struct ] | ........................................................ |
| MaxExpect | [ FASTA input ] | [ sec struct ] | .....((((.....))))((((((((....(((.....))).....)))))))).. |
| McQFold | [ FASTA input ] | [ sec struct ] | ....(((((((((.[[[[[[[))))...........))))).......]]]]]]]. |
| Multilign(seed) | [ FASTA input ] | [ sec struct ] | .....((((.....)))).(((((......(((.....)))........))))).. |
| Murlet(seed) | [ FASTA input ] | [ sec struct ] | ..((((((...((....)).))))))...........((((........))))... |
| NanoFolder | [ FASTA input ] | [ sec struct ] | (((.{{{{{((((.[[[[[[[)))).)))...(((.}}}}}....)))]]]]]]]. |
| PETfold_pre2.0(seed) | [ FASTA input ] | [ sec struct ] | ...(........)..((((((((((....))))...............)))))).. |
| PPfold(seed) | [ FASTA input ] | [ sec struct ] | ...............((((((((........))...............)))))).. |
| Pknots | [ FASTA input ] | [ sec struct ] | .....((((((((.[[[[[[[)))).))))(((.....))).......]]]]]]]. |
| PknotsRG | [ FASTA input ] | [ sec struct ] | ........(((((.[[[[[[[)))))....(((.....))).......]]]]]]]. |
| ProbKnot | [ FASTA input ] | [ sec struct ] | .....((((.....))))((((((((....(((.....))).....)))))))).. |
| RDfolder | [ FASTA input ] | [ sec struct ] | .....(((.......)))((((((((....(((.....))).....)))))))).. |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | ..............(((((((((((....))))...............))))))). |
| RNASampler(seed) | [ FASTA input ] | [ sec struct ] | ..(((((((.....)))).....)))...........(((........)))..... |
| RNAalifold(seed) | [ FASTA input ] | [ sec struct ] | ..((((((...((....)).))))))...........((((........))))... |
| RNAfold | [ FASTA input ] | [ sec struct ] | .(((.((((((((........)))).))))..)))..(((((......)))))... |
| RNAshapes | [ FASTA input ] | [ sec struct ] | .(((.((((((((........)))).))))..)))..(((((......)))))... |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | .....((((.....))))((((((((....(((.....))).....)))))))).. |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | ..((((((((((((......)))))).)))).))..((((((......)))))).. |
| RNAwolf | [ FASTA input ] | [ sec struct ] | ..((.(((((((((......)))))).)))..))..(((((........))))).. |
| RSpredict(seed) | [ FASTA input ] | [ sec struct ] | ..((((((...((....)).))))))........(..((((.......))))...) |
| Sfold | [ FASTA input ] | [ sec struct ] | .....(((.((((........))))..))).......(((((......)))))... |
| TurboFold(seed) | [ FASTA input ] | [ sec struct ] | .....((((.....))))((((((((....(((.....))).....)))))))).. |
| UNAFold | [ FASTA input ] | [ sec struct ] | .....((((.....))))((((((((....(((.....))).....)))))))).. |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | .....((((.....))))...((((....))))....(((((......)))))... |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | .....((((.....))))...((((....))))....(((((......)))))... |