CompaRNA - on-line benchmarks of RNA structure prediction methods
Home

Methods
Datasets
Rankings
RNA 2D Atlas

Help
FAQ

Contact us
RSS feeds
Twitter

RNA Secondary Structure Atlas - PDB - 2LJJ_A



RNA: 2LJJ_A
Rfam family: -

GGCCUCAGCACUACCCCAGUGUAGGUC
Reference structure (std) [ sec struct ] ((((...(.((.......)).).))))
Reference structure (ext) [ sec struct ] ((((...((((.......)))).))))
Afold [ FASTA input ] [ sec struct ] (((((..(((((.....))))))))))
CentroidFold [ FASTA input ] [ sec struct ] (((((..(((((.....))))))))))
CentroidFold (ext) [ FASTA input ] [ sec struct ] (((((..(((((.....))))))))))
CentroidHomfold‑LAST [ FASTA input ] [ sec struct ] (((((..(((((.....))))))))))
ContextFold [ FASTA input ] [ sec struct ] (((((...((((.....)))).)))))
Contrafold [ FASTA input ] [ sec struct ] (((((..(((((.....))))))))))
Fold [ FASTA input ] [ sec struct ] (((((..(((((.....))))))))))
HotKnots [ FASTA input ] [ sec struct ] (((((..(((((.....))))))))))
IPknot [ FASTA input ] [ sec struct ] (((((..(((((.....))))))))))
MCFold (ext) [ FASTA input ] [ sec struct ] (((((..(((((.....))))))))))
MCFold [ FASTA input ] [ sec struct ] (((((..(((((.....))))))))))
MaxExpect [ FASTA input ] [ sec struct ] (((((..(((((.....))))))))))
McQFold [ FASTA input ] [ sec struct ] (((((..(((((.....))))))))))
Pknots [ FASTA input ] [ sec struct ] (((((..(((((.....))))))))))
PknotsRG [ FASTA input ] [ sec struct ] (((((..(((((.....))))))))))
ProbKnot [ FASTA input ] [ sec struct ] (((((..(((((.....))))))))))
RNASLOpt [ FASTA input ] [ sec struct ] (((((..(((((.....))))))))))
RNAfold [ FASTA input ] [ sec struct ] (((((..(((((.....))))))))))
RNAshapes [ FASTA input ] [ sec struct ] (((((..(((((.....))))))))))
RNAsubopt [ FASTA input ] [ sec struct ] (((((..(((((.....))))))))))
RNAwolf (ext) [ FASTA input ] [ sec struct ] (((((..((((((...)))))))))))
RNAwolf [ FASTA input ] [ sec struct ] (((((..(((((.....))))))))))
Sfold [ FASTA input ] [ sec struct ] (((((..(((((.....))))))))))
UNAFold [ FASTA input ] [ sec struct ] (((((..(((((.....))))))))))
Vsfold4 [ FASTA input ] [ sec struct ] (((((..(((((.....))))))))))
Vsfold5 [ FASTA input ] [ sec struct ] (((((..(((((.....))))))))))