 | ||||||||||||||
| ||||||||||||||
 | ||||||||||||||
RNA Secondary Structure Atlas - PDB - 2MIY_A
RNA: 2MIY_A
Rfam family:
preQ1-II
| GCUUGGUGCUUAGCUUCUUUCACCAAGCAUAUUACACGCGGAUAACCGCCAAAGGAGAA | |||
| Reference structure (std) | [ sec struct ] | ((((((((.....[[[[[[.)))))))).........(((......)))..]]]]]].. | |
| Reference structure (ext) | [ sec struct ] |
((((((((.[{..<<<<...)))))))).........(((......)))..]}>>>>.. ( ) ( ) |
|
| CMfinder(seed) | [ FASTA input ] | [ sec struct ] | .............(((((((.................((((....)))).))))))).. |
| Carnac(seed) | [ FASTA input ] | [ sec struct ] | .....................................((((....)))).......... |
| CentroidAlifold(seed) | [ FASTA input ] | [ sec struct ] | .(((((((............)))))))..........((((....)))).......... |
| CentroidFold (ext) | [ FASTA input ] | [ sec struct ] | (((((((((..........))))))))).........((((....)))).......... |
| CentroidFold | [ FASTA input ] | [ sec struct ] | ((((((((............)))))))).........((((....)))).......... |
| ContextFold | [ FASTA input ] | [ sec struct ] | ((((((((............)))))))).........((((....)))).......... |
| Contrafold | [ FASTA input ] | [ sec struct ] | ((((((((............)))))))).........((((....)))).......... |
| DAFS(seed) | [ FASTA input ] | [ sec struct ] | .(((((((............)))))))..........((((....)))).......... |
| DotKnot | [ FASTA input ] | [ sec struct ] | ((((((((............)))))))).........((((....)))).......... |
| Fold | [ FASTA input ] | [ sec struct ] | ((((((((............)))))))).........((((....)))).......... |
| HotKnots | [ FASTA input ] | [ sec struct ] | ((((((((...((...))..)))))))).........((((....)))).......... |
| IPknot | [ FASTA input ] | [ sec struct ] | ((((((((............)))))))).........((((....)))).......... |
| MXScarna(seed) | [ FASTA input ] | [ sec struct ] | ..((((((...((...))..))))))..........(((((....)))))......... |
| Mastr(seed) | [ FASTA input ] | [ sec struct ] | .(((((((...((...))..)))))))..........((((....)))).......... |
| MaxExpect | [ FASTA input ] | [ sec struct ] | ((((((((............)))))))).........((((....)))).......... |
| McQFold | [ FASTA input ] | [ sec struct ] | ((((((((.....[[[[[[[)))))))).........((((....)))).]]]]]]].. |
| Multilign(seed) | [ FASTA input ] | [ sec struct ] | ((((((((............)))))))).........((((....)))).......... |
| Murlet(seed) | [ FASTA input ] | [ sec struct ] | ..((((((............))))))...........((((....)))).......... |
| NanoFolder | [ FASTA input ] | [ sec struct ] | ((((((((..[[.{{{{{{{)))))))).{{{]]...<<<<}}}.>>>>.}}}}}}}.. |
| PETfold_2.0(seed) | [ FASTA input ] | [ sec struct ] | .(((((((............)))))))..........((((....)))).......... |
| PETfold_pre2.0(seed) | [ FASTA input ] | [ sec struct ] | .(((((((............)))))))..........((((....)))).......... |
| PPfold(seed) | [ FASTA input ] | [ sec struct ] | .(((((((............)))))))..........((((....)))).......... |
| Pknots | [ FASTA input ] | [ sec struct ] | ((((((((............)))))))).........((((....))))(....).... |
| PknotsRG | [ FASTA input ] | [ sec struct ] | ((((((((......[[[[[[)))))))).........((((....))))..]]]]]].. |
| ProbKnot | [ FASTA input ] | [ sec struct ] | ((((((((............)))))))).........((((....)))).......... |
| RDfolder | [ FASTA input ] | [ sec struct ] | ((((((((............)))))))).........((((....)))).......... |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | ((((((((............)))))))).........((((....)))).......... |
| RNASampler(seed) | [ FASTA input ] | [ sec struct ] | .(((((((............)))))))..........((((....)))).......... |
| RNAalifold(seed) | [ FASTA input ] | [ sec struct ] | .(((((((............)))))))..........((((....)))).......... |
| RNAfold | [ FASTA input ] | [ sec struct ] | ((((((((...((...))..)))))))).........((((....)))).......... |
| RNAshapes | [ FASTA input ] | [ sec struct ] | ((((((((...((...))..)))))))).........((((....)))).......... |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | ((((((((...((...))..)))))))).........((((....)))).......... |
| RNAwolf | [ FASTA input ] | [ sec struct ] | ((((((((.(.......)..))))))))...(((........))).............. |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | ((((((((((.......)).))))))))...(((........)))((........).). |
| Sfold | [ FASTA input ] | [ sec struct ] | ((((((((...((...))..)))))))).........((((....)))).......... |
| TurboFold(seed) | [ FASTA input ] | [ sec struct ] | ((((((((............)))))))).........((((....)))).......... |
| UNAFold | [ FASTA input ] | [ sec struct ] | ((((((((...((...))..)))))))).........((((....)))).......... |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | .(((((((............)))))))..........((((....)))).......... |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | ((((((((............)))))))).........((((....)))).......... |