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RNA Secondary Structure Atlas - PDB - 2WW9_D



RNA: 2WW9_D
Rfam family: -

AGAACGCAGCGAAAUGCGAUACGUAAUGUGAAUUGCAGAAUUCCGUGAAUCAUCGAAUCUUUG
Reference structure (std) [ sec struct ] .((((............).....(.((....(((....)))..........))..)...))).
Reference structure (ext) [ sec struct ] (((({([<(.(.)..].}..)>((((((...(((..).))).......)..)).)).).))))
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Afold [ FASTA input ] [ sec struct ] (...((((......))))....(((((....)))))...((((.(((...))).))))....)
Alterna [ FASTA input ] [ sec struct ] (((.....(((.(((((((((((...)))..)))))...))).)))...........)))...
CentroidFold [ FASTA input ] [ sec struct ] ....((((......)))).............................................
CentroidFold (ext) [ FASTA input ] [ sec struct ] ....((((......)))).............................................
Contrafold [ FASTA input ] [ sec struct ] ....((((......))))...........(((((....)))))....................
HotKnots [ FASTA input ] [ sec struct ] ....((((......))))....(((((....)))))...((((.(((...))).)))).....
MCFold [ FASTA input ] [ sec struct ] (..(((.(.((.....)).).)))..)((((.((((.((..)).)))).))))((((..))))
MCFold (ext) [ FASTA input ] [ sec struct ] ((((((((((((...))))))))))))((((((((((((..))))))))))))((((..))))
MaxExpect [ FASTA input ] [ sec struct ] ....((((......))))....(((((....)))))...((((.(((...))).)))).....
McQFold [ FASTA input ] [ sec struct ] ....((((......)))).((((......(((((....)))))))))................
Pknots [ FASTA input ] [ sec struct ] ....((((......)))).((((..[[[.(((((....)))))))))...]]](((....)))
PknotsRG [ FASTA input ] [ sec struct ] ....((((......))))....(((((....)))))...((((.(((...))).)))).....
RDfolder [ FASTA input ] [ sec struct ] ....((((......)))).............................................
RNAfold [ FASTA input ] [ sec struct ] ....((((......))))....(((((....)))))...((((.(((...))).)))).....
RNAshapes [ FASTA input ] [ sec struct ] ....((((......)))).........((((.((((........)))).))))..........
RNAsubopt [ FASTA input ] [ sec struct ] (((.((((......)))).........((((.(..(.(....).)..).))))....)))...
Sfold [ FASTA input ] [ sec struct ] ....((((......)))).............................................
UNAFold [ FASTA input ] [ sec struct ] ....((((......)))).........((((.(..(........)..).))))..........
Vsfold4 [ FASTA input ] [ sec struct ] ....((((......))))....(((((....)))))...........................
Vsfold5 [ FASTA input ] [ sec struct ] ....((((......))))....(((((....)))))...(((.((........))))).....