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RNA Secondary Structure Atlas - PDB - 2YIE_X
RNA: 2YIE_X
Rfam family:
-
| GAUCUUCGGGGCAGGGUGAAAUUCCCGACCGGUGGUAUAGUCCACGAAUCCAU | |||
| Reference structure (std) | [ sec struct ] | .............(((.......))).....((((......))))........ | |
| Reference structure (ext) | [ sec struct ] |
.........(.(.((((...)..))))..).(((((..)..))))........ ( ) |
|
| Afold | [ FASTA input ] | [ sec struct ] | (.(..((((((...........))))))...((((......))))......)) |
| Alterna | [ FASTA input ] | [ sec struct ] | (((..((((((...........))))))...((((......))))..)))... |
| CRWrnafold | [ FASTA input ] | [ sec struct ] | (((..((((((...........))))))...((((......))))..)))... |
| CentroidFold (ext) | [ FASTA input ] | [ sec struct ] | ......(((....(((.......)))..)))((((......))))........ |
| CentroidFold | [ FASTA input ] | [ sec struct ] | ......(((....(((.......)))..)))((((......))))........ |
| CentroidHomfold‑LAST | [ FASTA input ] | [ sec struct ] | .............(((.......))).....((((......))))........ |
| Contrafold | [ FASTA input ] | [ sec struct ] | ......(((..(.(((.......)))).)))((((......))))........ |
| Cylofold | [ FASTA input ] | [ sec struct ] | .....((((((..[[[[.....))))))...((((......))))..]]]].. |
| Fold | [ FASTA input ] | [ sec struct ] | .....((((((...........)))))).((.(((......)))))....... |
| HotKnots | [ FASTA input ] | [ sec struct ] | .....((((((...........))))))...((((......))))........ |
| IPknot | [ FASTA input ] | [ sec struct ] | ......(((....(((.......)))..)))((((......))))........ |
| MCFold | [ FASTA input ] | [ sec struct ] | (((((.(.((.(.(((......))).).)).).))..(.((..)).))))... |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | ((((((((((((((((((..)))))))))))))))..((((..)))))))... |
| MaxExpect | [ FASTA input ] | [ sec struct ] | .....((((((...........))))))...((((......))))........ |
| McQFold | [ FASTA input ] | [ sec struct ] | .....((((((...........))))))...((((......))))........ |
| Pknots | [ FASTA input ] | [ sec struct ] | .....((((((...........))))))...((((......))))........ |
| PknotsRG | [ FASTA input ] | [ sec struct ] | .....((((((..[[[[.....))))))...((((......))))..]]]].. |
| ProbKnot | [ FASTA input ] | [ sec struct ] | .....((((((...........)))))).(.((((......)))))....... |
| RDfolder | [ FASTA input ] | [ sec struct ] | .....(((((.............)))))...((((......))))........ |
| RNAfold | [ FASTA input ] | [ sec struct ] | ....((((((((.(((.......))).(((...)))...)))).))))..... |
| RNAshapes | [ FASTA input ] | [ sec struct ] | ....((((((((.(((.......))).(((...)))...)))).))))..... |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | .......((((..(((.......)))..)).((((......))))....)).. |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | ...(((((((((........)).)))))..))((((((........)))))). |
| RNAwolf | [ FASTA input ] | [ sec struct ] | ...(((((((.............)))))..))((((............)))). |
| Sfold | [ FASTA input ] | [ sec struct ] | ...............................((((......))))........ |
| UNAFold | [ FASTA input ] | [ sec struct ] | .....((((((...........))))))...((((......))))........ |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | .....((((((...........))))))...((((......))))........ |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | .(((([[[[[[..)))).....]]]]]]...((((......))))........ |