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RNA Secondary Structure Atlas - PDB - 2YIE_Z



RNA: 2YIE_Z
Rfam family: -

GAUUGAUUUGGUGAAAUUCCAAAACCGACAGUAGAGUCUGGAUGAGAGAAGAUUCG
Reference structure (std) [ sec struct ] ......(((((.......))))).....(((......)))................
Reference structure (ext) [ sec struct ] ....(.((((((...)..)))))..).(((((..)..))))...............
Afold [ FASTA input ] [ sec struct ] (((((..(((((...........))))))))).((((((..........)))))))
Alterna [ FASTA input ] [ sec struct ] .((((..(((((...........))))))))).((((((..........)))))).
CRWrnafold [ FASTA input ] [ sec struct ] .((((..(((((...........))))))))).((((((..........)))))).
CentroidFold [ FASTA input ] [ sec struct ] ......(((((.......)))))..........((((((..........)))))).
CentroidFold (ext) [ FASTA input ] [ sec struct ] ......(((((.......)))))..........((((((..........)))))).
CentroidHomfold‑LAST [ FASTA input ] [ sec struct ] ......(((((.......))))).....(((......)))................
Contrafold [ FASTA input ] [ sec struct ] ......(((((.......)))))..........((((((..........)))))).
Cylofold [ FASTA input ] [ sec struct ] .......(((((...........))))).....((((((..........)))))).
Fold [ FASTA input ] [ sec struct ] .((((..(((((...........))))))))).((((((..........)))))).
HotKnots [ FASTA input ] [ sec struct ] .((((..(((((...........))))))))).((((((..........)))))).
IPknot [ FASTA input ] [ sec struct ] ......(((((.......)))))..........((((((..........)))))).
MCFold (ext) [ FASTA input ] [ sec struct ] ((((((((((((...)..)))))))))))((((((((((((...))))))))))))
MCFold [ FASTA input ] [ sec struct ] (.(.(.(((((.......))))).).).).(.(...(((.......)))...).).
MaxExpect [ FASTA input ] [ sec struct ] .((((..(((((...........))))))))).((((((..........)))))).
McQFold [ FASTA input ] [ sec struct ] ......(((((.......)))))..........((((((..........)))))).
Pknots [ FASTA input ] [ sec struct ] .((((..(((((...........))))))))).((((((..........)))))).
PknotsRG [ FASTA input ] [ sec struct ] .((((..(((((...........))))))))).((((((..........)))))).
ProbKnot [ FASTA input ] [ sec struct ] .((((..(((((...........))))))))).((((((..........)))))).
RDfolder [ FASTA input ] [ sec struct ] ......(((((.......)))))..........((((((..........)))))).
RNAfold [ FASTA input ] [ sec struct ] .((((..(((((...........))))))))).((((((..........)))))).
RNAshapes [ FASTA input ] [ sec struct ] .((((..(((((...........))))))))).((((((..........)))))).
RNAsubopt [ FASTA input ] [ sec struct ] .((((..(((((...........))))))))).((((((..........)))))).
RNAwolf (ext) [ FASTA input ] [ sec struct ] ..(..)((((((.....))))))(..(((......)))..)......(((..))).
RNAwolf [ FASTA input ] [ sec struct ] ......((((((.....))))))...(((......))).........(((..))).
Sfold [ FASTA input ] [ sec struct ] .((((..(((((...........))))))))).((((((..........)))))).
UNAFold [ FASTA input ] [ sec struct ] .((((..(((((...........))))))))).((((((..........)))))).
Vsfold4 [ FASTA input ] [ sec struct ] .......(((((...........))))).....((((((..........)))))).
Vsfold5 [ FASTA input ] [ sec struct ] .......(((((...........))))).....((((((..........)))))).