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RNA Secondary Structure Atlas - PDB - 3J0L_1
RNA: 3J0L_1
Rfam family:
-
| GAAUGAUUAGAGGUUCCGGGGUCGAAAUGACCUUGACCUAUUCUCAAACU | |||
| Reference structure (std) | [ sec struct ] | ....((..(.(((.(.(.(.(((.....))).).))))).)..))..... | |
| Reference structure (ext) | [ sec struct ] |
.((((((((.(((.(.(.(((((.....))))).))))).))))))..)) ( ) |
|
| Afold | [ FASTA input ] | [ sec struct ] | (..(((....((((..(((((((.....)))))))))))....)))...) |
| Alterna | [ FASTA input ] | [ sec struct ] | ...(((...((((((..(((((((...)))))))))))...))))).... |
| CRWrnafold | [ FASTA input ] | [ sec struct ] | ...(((....((((..((((((((...))))))))))))....))).... |
| CentroidFold (ext) | [ FASTA input ] | [ sec struct ] | ..........((((..(((((((.....)))))))))))........... |
| CentroidFold | [ FASTA input ] | [ sec struct ] | ..........((((..(((((((.....)))))))))))........... |
| CentroidHomfold‑LAST | [ FASTA input ] | [ sec struct ] | ..........((((..(((((((.....)))))))))))........... |
| ContextFold | [ FASTA input ] | [ sec struct ] | ...(((....(((((..((((((.....)))))))))))....))).... |
| Contrafold | [ FASTA input ] | [ sec struct ] | ....((....((((..(((((((.....)))))))))))....))..... |
| Cylofold | [ FASTA input ] | [ sec struct ] | ..........((((..(((((((.....)))))))))))........... |
| Fold | [ FASTA input ] | [ sec struct ] | ...(((....((((..(((((((.....)))))))))))....))).... |
| HotKnots | [ FASTA input ] | [ sec struct ] | ...(((....((((..(((((((.....)))))))))))....))).... |
| IPknot | [ FASTA input ] | [ sec struct ] | ...(((....((((..(((((((.....)))))))))))....))).... |
| MCFold | [ FASTA input ] | [ sec struct ] | (..(((..(.((((..(((((((.....))))))))))).)..)))..). |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | ((.(((((((((((..((((((((..).))))))))))))))))))).). |
| MaxExpect | [ FASTA input ] | [ sec struct ] | ...(((....((((..(((((((.....)))))))))))....))).... |
| McQFold | [ FASTA input ] | [ sec struct ] | ..........((((..((((((((...))))))))))))........... |
| Pknots | [ FASTA input ] | [ sec struct ] | ..........((((..(((((((.....)))))))))))........... |
| PknotsRG | [ FASTA input ] | [ sec struct ] | ...(((....((((..(((((((.....)))))))))))....))).... |
| ProbKnot | [ FASTA input ] | [ sec struct ] | ...(((....((((..((((((((...))))))))))))....))).... |
| RDfolder | [ FASTA input ] | [ sec struct ] | ..........((((..(((((((.....)))))))))))........... |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | ..........((((..((((((((...))))))))))))........... |
| RNAfold | [ FASTA input ] | [ sec struct ] | ...(((....((((..(((((((.....)))))))))))....))).... |
| RNAshapes | [ FASTA input ] | [ sec struct ] | ...(((....((((..(((((((.....)))))))))))....))).... |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | ...(((....((((..(((((((.....)))))))))))....))).... |
| RNAwolf | [ FASTA input ] | [ sec struct ] | ...(((.(...((.((.((((.........))))))))...).))).... |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | .(.(((((((.((.((.((((.(......))))))))).))))))).).. |
| Sfold | [ FASTA input ] | [ sec struct ] | ...(((....((((..((((((((...))))))))))))....))).... |
| UNAFold | [ FASTA input ] | [ sec struct ] | ...(((....(((((...(((((.....))))).)))))....))).... |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | ...........(((.....((((.....)))).(((.......))).))) |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | ((((........))))...((((.....)))).(((.......))).... |