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RNA Secondary Structure Atlas - PDB - 3J0L_7
RNA: 3J0L_7
Rfam family:
-
| GCUUGUGGCAGUCAAGCGUUCAUAGCGACAUUGCUUUUUGAUUCUUCGAU | |||
| Reference structure (std) | [ sec struct ] | (.(.(.((((.(...((.......))...).))))...)).)........ | |
| Reference structure (ext) | [ sec struct ] |
(((.((((((.(.(((((.....)))))..)))))..)))))........ ( ) ( ) |
|
| Afold | [ FASTA input ] | [ sec struct ] | (.(((.((.(((((((((.............))))...))))))).)))) |
| Alterna | [ FASTA input ] | [ sec struct ] | ......(((((.....((((...))))...)))))..((((....)))). |
| CRWrnafold | [ FASTA input ] | [ sec struct ] | (((((.......)))))......((((....))))..((((....)))). |
| CentroidFold (ext) | [ FASTA input ] | [ sec struct ] | (((((.......)))))................................. |
| CentroidFold | [ FASTA input ] | [ sec struct ] | (((((.......)))))................................. |
| CentroidHomfold‑LAST | [ FASTA input ] | [ sec struct ] | ......((((((...((.......))...))))))............... |
| ContextFold | [ FASTA input ] | [ sec struct ] | (((((.......)))))......((((....))))..((((....)))). |
| Contrafold | [ FASTA input ] | [ sec struct ] | (((((.......))))).......((......))................ |
| Cylofold | [ FASTA input ] | [ sec struct ] | (((((.[[[[[[)))))............]]]]]]..((((....)))). |
| Fold | [ FASTA input ] | [ sec struct ] | (((((.......)))))..(((.((((....))))...)))......... |
| HotKnots | [ FASTA input ] | [ sec struct ] | (((((.{{{{{{)))))..(((...[[[.}}}}}}...)))....]]].. |
| IPknot | [ FASTA input ] | [ sec struct ] | (((((.......))))).......((......))................ |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | ((((((...)..))))).((((((((((..)))))))..(((..)))))) |
| MCFold | [ FASTA input ] | [ sec struct ] | (((((.......)))))..(((.(((((..))))).)..((....)))). |
| MaxExpect | [ FASTA input ] | [ sec struct ] | (((((.......)))))......(((......)))..((((....)))). |
| McQFold | [ FASTA input ] | [ sec struct ] | (((((.......)))))......(((((..)))))............... |
| Pknots | [ FASTA input ] | [ sec struct ] | (((((.[[[[[[)))))((.....))...]]]]]]..((((....)))). |
| PknotsRG | [ FASTA input ] | [ sec struct ] | (((((.[[[[[[)))))((.....))...]]]]]]..((((....)))). |
| ProbKnot | [ FASTA input ] | [ sec struct ] | (((((.......)))))......((((....))))..((((....)))). |
| RDfolder | [ FASTA input ] | [ sec struct ] | (((((.......)))))................................. |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | (((((.......)))))......((((....))))..((((....)))). |
| RNAfold | [ FASTA input ] | [ sec struct ] | (((((.......)))))..(((.((((....))))...)))......... |
| RNAshapes | [ FASTA input ] | [ sec struct ] | (((((.......)))))..(((.((((....))))...)))......... |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | (((((.......)))))..(((.((((....))))...)))......... |
| RNAwolf | [ FASTA input ] | [ sec struct ] | (((((.(((........))))).)))..((........)).......... |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | (((((.(((........))))).)))..((........)).(......). |
| Sfold | [ FASTA input ] | [ sec struct ] | ......................................(((....))).. |
| UNAFold | [ FASTA input ] | [ sec struct ] | ......((((((...((.......))...))))))..((((....)))). |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | ......((((((...((.......))...))))))...(((....))).. |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | (((((.......)))))......((((....))))..((((....)))). |