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RNA Secondary Structure Atlas - PDB - 3NMU_E
RNA: 3NMU_E
Rfam family:
-
| GCCGUUGAAGCUCUGACCGAAAGGCGUGAUGAGC | |||
| Reference structure (std) | [ sec struct ] | ............(...((....))......)... | |
| Reference structure (ext) | [ sec struct ] | ............((((((....))...))))... | |
| Afold | [ FASTA input ] | [ sec struct ] | ((((((...((.((.......))))..)))).)) |
| Alterna | [ FASTA input ] | [ sec struct ] | (((((((..(((..........))).))))).)) |
| CentroidFold | [ FASTA input ] | [ sec struct ] | .........((((...((....))......)))) |
| CentroidFold (ext) | [ FASTA input ] | [ sec struct ] | .........((((...((....))......)))) |
| CentroidHomfold‑LAST | [ FASTA input ] | [ sec struct ] | .........((((.................)))) |
| Contrafold | [ FASTA input ] | [ sec struct ] | .........((((...((....))......)))) |
| Cylofold | [ FASTA input ] | [ sec struct ] | (((......[[[[.........))).....]]]] |
| Fold | [ FASTA input ] | [ sec struct ] | (((((((..((.((.......)))).))))).)) |
| HotKnots | [ FASTA input ] | [ sec struct ] | .........((((((.((....))))....)))) |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | ((((((..)))((((((((..)))))))).).)) |
| MCFold | [ FASTA input ] | [ sec struct ] | ((((((..)))((...((....))...)).).)) |
| MaxExpect | [ FASTA input ] | [ sec struct ] | ((((((...((.((.......))))..)))).)) |
| McQFold | [ FASTA input ] | [ sec struct ] | .........((((.................)))) |
| Pknots | [ FASTA input ] | [ sec struct ] | .........((((((.((....))))....)))) |
| PknotsRG | [ FASTA input ] | [ sec struct ] | .........((((((.((....))))....)))) |
| ProbKnot | [ FASTA input ] | [ sec struct ] | (((((((..((.((.......)))).))))).)) |
| RDfolder | [ FASTA input ] | [ sec struct ] | .........((((.................)))) |
| RNAfold | [ FASTA input ] | [ sec struct ] | .........((((((.((....))))....)))) |
| RNAshapes | [ FASTA input ] | [ sec struct ] | .........((((((.((....))))....)))) |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | .........((((((.((....))))....)))) |
| Sfold | [ FASTA input ] | [ sec struct ] | .........((((.(.((....))).....)))) |
| UNAFold | [ FASTA input ] | [ sec struct ] | .........((((((.((....))))....)))) |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | .........((((.................)))) |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | ...(((....[[[.))).............]]]. |