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RNA Secondary Structure Atlas - PDB - 3ZEX_F
RNA: 3ZEX_F
Rfam family:
-
| CGAAUCGCCACUUCUCUUAUCUGGGUGCUCUGCCCGCCCUUGUCGGCGCCCAGUACCUUCAUUUUCACAAGAU | |||
| Reference structure (std) | [ sec struct ] | ..................................((((......))))......................... | |
| Reference structure (ext) | [ sec struct ] |
..................(..(.........[(((((((.().))))))].)..).)................ ( ) |
|
| Afold | [ FASTA input ] | [ sec struct ] | (...................(((((((((..((........)).)))))))))...................) |
| CentroidFold | [ FASTA input ] | [ sec struct ] | ....................(((((((((...............))))))))).................... |
| CentroidFold (ext) | [ FASTA input ] | [ sec struct ] | ....................(((((((((...............))))))))).................... |
| ContextFold | [ FASTA input ] | [ sec struct ] | .(((.......)))......(((((((((...............))))))))).(.(((.........))).) |
| Contrafold | [ FASTA input ] | [ sec struct ] | ....................(((((((((...............))))))))).................... |
| Fold | [ FASTA input ] | [ sec struct ] | ....................(((((((((..((........)).))))))))).................... |
| HotKnots | [ FASTA input ] | [ sec struct ] | ....................((((((((.(.((........)).))))))))).................... |
| IPknot | [ FASTA input ] | [ sec struct ] | ....................(((((((((...............))))))))).................... |
| MCFold | [ FASTA input ] | [ sec struct ] | .(((.......)))((((((..(((((((..(((((.(...).))).))..)))))))..))......)))). |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | .(((((...)))))((((((((((((((((((((((((...))))).)))))))))))))))......)))). |
| MaxExpect | [ FASTA input ] | [ sec struct ] | ....................(((((((((..((........)).))))))))).................... |
| McQFold | [ FASTA input ] | [ sec struct ] | ....................(((((((((...............))))))))).................... |
| Pknots | [ FASTA input ] | [ sec struct ] | .(((.......)))......(((((((((...............))))))))).................... |
| PknotsRG | [ FASTA input ] | [ sec struct ] | ....................(((((((((..((........)).))))))))).................... |
| ProbKnot | [ FASTA input ] | [ sec struct ] | .(((.......)))......((((((((.................)))))))).................... |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | ......................................................................... |
| RNAfold | [ FASTA input ] | [ sec struct ] | ....................(((((((((..((........)).))))))))).................... |
| RNAshapes | [ FASTA input ] | [ sec struct ] | ....................(((((((((..((........)).))))))))).................... |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | ....................((((((((.(.((........)).))))))))).................... |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | ........((((.(........)))))(.(((((((.((..))))).)..)))...(((((...).).)))). |
| RNAwolf | [ FASTA input ] | [ sec struct ] | ........((((.(........)))))..(((((((..(..).))).)..)))...(((.(...)...))).. |
| Sfold | [ FASTA input ] | [ sec struct ] | ......................(((((((......................)))))))............... |
| UNAFold | [ FASTA input ] | [ sec struct ] | ....................(((((((((..((........)).))))))))).................... |