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RNA Secondary Structure Atlas - PDB - 4ATO_G
RNA: 4ATO_G
Rfam family:
-
| AAAUUGGUGUAACCUUACCGUAGUAGGUGCUAA | |||
| Reference structure (std) | [ sec struct ] | .....(((...[[[[.))).....]]]]..... | |
| Reference structure (ext) | [ sec struct ] |
.....(((...[[[[[)))....]]]]]..... ( ) () |
|
| Afold | [ FASTA input ] | [ sec struct ] | (....((((......)))).((((....))))) |
| CentroidFold (ext) | [ FASTA input ] | [ sec struct ] | ............((..((....)).))...... |
| CentroidFold | [ FASTA input ] | [ sec struct ] | ...........((((.((....))))))..... |
| ContextFold | [ FASTA input ] | [ sec struct ] | .((...........))................. |
| Contrafold | [ FASTA input ] | [ sec struct ] | .....((....((((.((....)))))).)).. |
| Cylofold | [ FASTA input ] | [ sec struct ] | ....(((((..[[[[)))))....]]]]..... |
| Fold | [ FASTA input ] | [ sec struct ] | .....((((......)))).((((....)))). |
| HotKnots | [ FASTA input ] | [ sec struct ] | ....(((((..[[[[)))))((((]]]])))). |
| IPknot | [ FASTA input ] | [ sec struct ] | ....((((...((((.((....)))))))))). |
| MCFold | [ FASTA input ] | [ sec struct ] | ...(((((...(((.(((....))))))))))) |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | ...(((((...(((.(((....))))))))))) |
| MaxExpect | [ FASTA input ] | [ sec struct ] | .....((((......))))...((....))... |
| McQFold | [ FASTA input ] | [ sec struct ] | .............(((((....)))))...... |
| NanoFolder | [ FASTA input ] | [ sec struct ] | ....(((((..[[[[)))))((((]]]])))). |
| Pknots | [ FASTA input ] | [ sec struct ] | ....(((((......)))))((((....)))). |
| PknotsRG | [ FASTA input ] | [ sec struct ] | ....(((((..[[[[)))))....]]]]..... |
| ProbKnot | [ FASTA input ] | [ sec struct ] | .....((((......)))).((((....)))). |
| RDfolder | [ FASTA input ] | [ sec struct ] | ...........((((.........))))..... |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | ....(((((......)))))((((....)))). |
| RNAfold | [ FASTA input ] | [ sec struct ] | .....((((......)))).((((....)))). |
| RNAshapes | [ FASTA input ] | [ sec struct ] | .....((((......)))).((((....)))). |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | ....(((((......)))))((((....)))). |
| RNAwolf | [ FASTA input ] | [ sec struct ] | ........((((..))))..(((......))). |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | ........((((..))))(.(((......)))) |
| Sfold | [ FASTA input ] | [ sec struct ] | ............(.............)...... |
| UNAFold | [ FASTA input ] | [ sec struct ] | .....((((......)))).((((....)))). |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | ....(((((......))))).(((....))).. |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | .....((((..[[[.)))).((((.]]])))). |