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RNA Secondary Structure Atlas - PDB - 4C4W_H
RNA: 4C4W_H
Rfam family:
-
| GAGCAAGAGCCAUUGCACUCCGGUUUGAUGACCUC | |||
| Reference structure (std) | [ sec struct ] | (((...(((((..........)))))......))) | |
| Reference structure (ext) | [ sec struct ] |
(((.(((((((..........))))))...).))) ( ) |
|
| Afold | [ FASTA input ] | [ sec struct ] | (((((.(((((..........)))))..))..))) |
| CentroidFold (ext) | [ FASTA input ] | [ sec struct ] | ...(..........).................... |
| CentroidFold | [ FASTA input ] | [ sec struct ] | ..((((......)))).....((((....)))).. |
| ContextFold | [ FASTA input ] | [ sec struct ] | (((...(((((..........)))))......))) |
| Contrafold | [ FASTA input ] | [ sec struct ] | ..((((......)))).....((((....)))).. |
| DotKnot | [ FASTA input ] | [ sec struct ] | ..((((......)))).....((((....)))).. |
| Fold | [ FASTA input ] | [ sec struct ] | ..((((......)))).....((((....)))).. |
| HotKnots | [ FASTA input ] | [ sec struct ] | ..((((......)))).....((((....)))).. |
| IPknot | [ FASTA input ] | [ sec struct ] | ..((((......)))).....((((....)))).. |
| MaxExpect | [ FASTA input ] | [ sec struct ] | ..((((......)))).....((((....)))).. |
| McQFold | [ FASTA input ] | [ sec struct ] | ..((((......)))).....((((....)))).. |
| NanoFolder | [ FASTA input ] | [ sec struct ] | (((((([[[[[.))))..)).]]]]]((.....)) |
| Pknots | [ FASTA input ] | [ sec struct ] | ..((((......)))).....((((....)))).. |
| PknotsRG | [ FASTA input ] | [ sec struct ] | ..((((......)))).....((((....)))).. |
| ProbKnot | [ FASTA input ] | [ sec struct ] | ..((((......)))).....((((....)))).. |
| RDfolder | [ FASTA input ] | [ sec struct ] | ..((((......)))).....(((......))).. |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | ..((((......)))).....((((....)))).. |
| RNAfold | [ FASTA input ] | [ sec struct ] | ..((((......)))).....((((....)))).. |
| RNAshapes | [ FASTA input ] | [ sec struct ] | ..((((......)))).....((((....)))).. |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | ..((((......)))).....((((....)))).. |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | ((((((......)))..))).(((......))).. |
| RNAwolf | [ FASTA input ] | [ sec struct ] | ((((((......)))..))).(((......))).. |
| Sfold | [ FASTA input ] | [ sec struct ] | ..((((......)))).....((((....)))).. |
| UNAFold | [ FASTA input ] | [ sec struct ] | ..((((......)))).....((((....)))).. |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | ..((((......)))).....((((....)))).. |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | ..((((......)))).....((((....)))).. |