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RNA Secondary Structure Atlas - PDB - 4FNJ_A
RNA: 4FNJ_A
Rfam family:
-
| CUGCUGGCUAAGGCAUGAAAGUGCUAUGCCUGCUG | |||
| Reference structure (std) | [ sec struct ] | (.((.(((..((((((....))))).)))).)).) | |
| Reference structure (ext) | [ sec struct ] |
((((.((((()((((((..))))))).))).)))) ( ) |
|
| Afold | [ FASTA input ] | [ sec struct ] | (.((.(((...(((((....)))))..))).).)) |
| CentroidFold (ext) | [ FASTA input ] | [ sec struct ] | ..((......(((((((.......))))))))).. |
| CentroidFold | [ FASTA input ] | [ sec struct ] | ..((.(((...(((((....)))))..))).)).. |
| ContextFold | [ FASTA input ] | [ sec struct ] | ..((.(((...(((((....)))))..))).)).. |
| Contrafold | [ FASTA input ] | [ sec struct ] | ..((.(((...(((((....)))))..))).)).. |
| Cylofold | [ FASTA input ] | [ sec struct ] | .....(((...(((((....)))))..)))..... |
| Fold | [ FASTA input ] | [ sec struct ] | ..((.(((...(((((....)))))..))).)).. |
| HotKnots | [ FASTA input ] | [ sec struct ] | ..((.(((...(((((....)))))..))).)).. |
| IPknot | [ FASTA input ] | [ sec struct ] | ..((.(((...(((((....)))))..))).)).. |
| MCFold | [ FASTA input ] | [ sec struct ] | (.((.(((.(.(((((....))))).)))).)).) |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | ((((((((.((((((((..)))))))))))))))) |
| MaxExpect | [ FASTA input ] | [ sec struct ] | ..((.(((...(((((....)))))..))).)).. |
| McQFold | [ FASTA input ] | [ sec struct ] | ..........(((((((.......))))))).... |
| Pknots | [ FASTA input ] | [ sec struct ] | .....(((..(((((((.......)))))))))). |
| PknotsRG | [ FASTA input ] | [ sec struct ] | ..((.(((...(((((....)))))..))).)).. |
| ProbKnot | [ FASTA input ] | [ sec struct ] | .....(((.(.(((((....))))).))))..... |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | ....((((..(((((((.......))))))))))) |
| RNAfold | [ FASTA input ] | [ sec struct ] | ..((.(((...(((((....)))))..))).)).. |
| RNAshapes | [ FASTA input ] | [ sec struct ] | ..((.(((...(((((....)))))..))).)).. |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | ..((.(((...(((((....)))))..))).)).. |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | ((...))..((((((...........))))))... |
| RNAwolf | [ FASTA input ] | [ sec struct ] | ((...))...(((((...........))))).... |
| Sfold | [ FASTA input ] | [ sec struct ] | ..((.(((...(((((....)))))..))).)).. |
| UNAFold | [ FASTA input ] | [ sec struct ] | ..((.(((...(((((....)))))..))).)).. |