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RNA Secondary Structure Atlas - PDB - 4M6D_L



RNA: 4M6D_L
Rfam family: -

GGCGGCUAAAGAGUGCAGAGUUACUUAGUUCACUGCAGACGCC
Reference structure (std) [ sec struct ] .(((..(.......((...(.(.[..)]..)...)))..))).
Reference structure (ext) [ sec struct ] .((((.(..(...)((...(.(.[..)]..)...))).)))).
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Afold [ FASTA input ] [ sec struct ] ((((.((..((...((.(((...))).))...))..)).))))
CentroidFold (ext) [ FASTA input ] [ sec struct ] ((((.(.......(((((..............)))))).))))
CentroidFold [ FASTA input ] [ sec struct ] ((((.((.......((((.(..........).)))))).))))
ContextFold [ FASTA input ] [ sec struct ] (((..(....)..(((((.(..........).)))))...)))
Contrafold [ FASTA input ] [ sec struct ] ((((.((..((.(.((.(((...))).)).).))..)).))))
DotKnot [ FASTA input ] [ sec struct ] ....(((((.....[[[[......)))))...]]]].......
Fold [ FASTA input ] [ sec struct ] ((((.........(((((..............)))))..))))
HotKnots [ FASTA input ] [ sec struct ] ((((.((..((.(.((.(((...))).)).).))..)).))))
IPknot [ FASTA input ] [ sec struct ] ((((.((.......((((..............)))))).))))
MCFold (ext) [ FASTA input ] [ sec struct ] ((((((((((((((((((((...))))))))))))))))))))
MCFold [ FASTA input ] [ sec struct ] ((((.((..((.(.((.(((...))).)).).))..)).))))
MaxExpect [ FASTA input ] [ sec struct ] ((((.........(((((..............)))))..))))
McQFold [ FASTA input ] [ sec struct ] ((((.........(((((..............)))))..))))
NanoFolder [ FASTA input ] [ sec struct ] (((((((((.[[.{{{{{..<<..)))))]].}}}}}>>))))
Pknots [ FASTA input ] [ sec struct ] ((((.((....))(((((..............)))))..))))
PknotsRG [ FASTA input ] [ sec struct ] ((((.((..((...((.(((...))).))...))..)).))))
ProbKnot [ FASTA input ] [ sec struct ] ((((.........(((((..............)))))..))))
RDfolder [ FASTA input ] [ sec struct ] ((((.........(((((..............)))))..))))
RNASLOpt [ FASTA input ] [ sec struct ] ((((.........(((((..............)))))..))))
RNAfold [ FASTA input ] [ sec struct ] ((((.((..((.(.((.(((...))).)).).))..)).))))
RNAshapes [ FASTA input ] [ sec struct ] ((((.((..((...((.(((...))).))...))..)).))))
RNAsubopt [ FASTA input ] [ sec struct ] (((((((....)))((((.(..........).))))...))))
RNAwolf [ FASTA input ] [ sec struct ] ((((.........(((((.((........)).)))))..))))
RNAwolf (ext) [ FASTA input ] [ sec struct ] ((((.(.((..))((((((((........)))))))).)))))
Sfold [ FASTA input ] [ sec struct ] ((((.(...............................).))))
UNAFold [ FASTA input ] [ sec struct ] ((((.((..((...((..((...))..))...))..)).))))
Vsfold4 [ FASTA input ] [ sec struct ] ((((.........(((((..............)))))..))))
Vsfold5 [ FASTA input ] [ sec struct ] ((((.........(((((..............)))))..))))